RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 ZNF428Q96B54 188 aa29.31■■■□□ 2.28
SHD-201ENST00000543264 ZNF445P59923 1031 aa29.3■■■□□ 2.28
SHD-201ENST00000543264 RABEP1Q15276 862 aa29.3■■■□□ 2.28
SHD-201ENST00000543264 ZSCAN23Q3MJ62 389 aa29.3■■■□□ 2.28
SHD-201ENST00000543264 FCHSD2O94868 740 aa29.29■■■□□ 2.28
SHD-201ENST00000543264 NUCB2P80303 420 aa29.29■■■□□ 2.28
SHD-201ENST00000543264 PDZRN4Q6ZMN7 1036 aaPredicted RBP29.29■■■□□ 2.28
SHD-201ENST00000543264 ABCA9Q8IUA7 1624 aa29.29■■■□□ 2.28
SHD-201ENST00000543264 LMTK2Q8IWU2 1503 aa29.29■■■□□ 2.28
SHD-201ENST00000543264 VGFO15240 615 aaPredicted RBP29.29■■■□□ 2.28
SHD-201ENST00000543264 ARHGAP45Q92619 1136 aa29.29■■■□□ 2.28
SHD-201ENST00000543264 TERF2IPQ9NYB0 399 aa29.29■■■□□ 2.28
SHD-201ENST00000543264 PKP1Q13835 747 aa29.28■■■□□ 2.28
SHD-201ENST00000543264 LMBRD1Q9NUN5 540 aa29.28■■■□□ 2.28
SHD-201ENST00000543264 RBM10P98175 930 aaKnown RBP29.27■■■□□ 2.28
SHD-201ENST00000543264 ARHGEF28Q8N1W1 1705 aaKnown RBP29.27■■■□□ 2.28
SHD-201ENST00000543264 RBSNQ9H1K0 784 aa29.27■■■□□ 2.28
SHD-201ENST00000543264 PLEKHM2Q8IWE5 1019 aa29.26■■■□□ 2.28
SHD-201ENST00000543264 FBLN1P23142 703 aa29.25■■■□□ 2.27
SHD-201ENST00000543264 R3HCC1Q9Y3T6 440 aaKnown RBP29.25■■■□□ 2.27
SHD-201ENST00000543264 MINK1Q8N4C8 1332 aaPredicted RBP29.25■■■□□ 2.27
SHD-201ENST00000543264 PHACTR3Q96KR7 559 aa29.24■■■□□ 2.27
SHD-201ENST00000543264 PRPF40AO75400 957 aaKnown RBP29.23■■■□□ 2.27
SHD-201ENST00000543264 HMOX1P09601 288 aa29.23■■■□□ 2.27
SHD-201ENST00000543264 C16orf71Q8IYS4 520 aaPredicted RBP29.23■■■□□ 2.27
SHD-201ENST00000543264 PIK3R4Q99570 1358 aa29.23■■■□□ 2.27
SHD-201ENST00000543264 KIDINS220Q9ULH0 1771 aa29.23■■■□□ 2.27
SHD-201ENST00000543264 PRIM1P49642 420 aaKnown RBP29.23■■■□□ 2.27
SHD-201ENST00000543264 USP26Q9BXU7 913 aa29.23■■■□□ 2.27
SHD-201ENST00000543264 CYP2E1P05181 493 aaPredicted RBP29.22■■■□□ 2.27
SHD-201ENST00000543264 PTCH1Q13635 1447 aa29.22■■■□□ 2.27
SHD-201ENST00000543264 ABCC4O15439 1325 aa29.22■■■□□ 2.27
SHD-201ENST00000543264 RBM27Q9P2N5 1060 aaKnown RBP29.21■■■□□ 2.27
SHD-201ENST00000543264 PNPLA6Q8IY17 1366 aa29.21■■■□□ 2.27
SHD-201ENST00000543264 ATAD2Q6PL18 1390 aa29.21■■■□□ 2.27
SHD-201ENST00000543264 HS1BP3Q53T59 392 aa29.2■■■□□ 2.26
SHD-201ENST00000543264 TTC22Q5TAA0 569 aa29.2■■■□□ 2.26
SHD-201ENST00000543264 NOL7Q9UMY1 257 aaKnown RBP29.2■■■□□ 2.26
SHD-201ENST00000543264 CAMSAP1Q5T5Y3 1602 aa29.2■■■□□ 2.26
SHD-201ENST00000543264 NFE2L2Q16236 605 aa29.19■■■□□ 2.26
SHD-201ENST00000543264 XPCQ01831 940 aaPredicted RBP29.19■■■□□ 2.26
SHD-201ENST00000543264 ZGPATQ8N5A5 531 aaKnown RBP29.19■■■□□ 2.26
SHD-201ENST00000543264 GNAI1P63096 354 aa29.18■■■□□ 2.26
SHD-201ENST00000543264 MBIPQ9NS73 344 aa29.18■■■□□ 2.26
SHD-201ENST00000543264 ARHGAP31Q2M1Z3 1444 aa29.18■■■□□ 2.26
SHD-201ENST00000543264 LRRC7Q96NW7 1537 aa29.18■■■□□ 2.26
SHD-201ENST00000543264 TWISTNBQ3B726 338 aaPredicted RBP29.18■■■□□ 2.26
SHD-201ENST00000543264 FAM13BQ9NYF5 915 aa29.18■■■□□ 2.26
SHD-201ENST00000543264 HDGFL2Q7Z4V5 671 aaPredicted RBP29.17■■■□□ 2.26
SHD-201ENST00000543264 TERF1P54274 439 aa29.17■■■□□ 2.26
SHD-201ENST00000543264 GPT2Q8TD30 523 aa29.17■■■□□ 2.26
SHD-201ENST00000543264 EIF2AK3Q9NZJ5 1116 aaKnown RBP29.17■■■□□ 2.26
SHD-201ENST00000543264 PDLIM2Q96JY6 352 aa29.16■■■□□ 2.26
SHD-201ENST00000543264 DCTPP1Q9H773 170 aa29.16■■■□□ 2.26
SHD-201ENST00000543264 CWC22Q9HCG8 908 aaKnown RBP29.16■■■□□ 2.26
SHD-201ENST00000543264 INTS3Q68E01 1043 aaKnown RBP29.16■■■□□ 2.26
SHD-201ENST00000543264 CFAP44Q96MT7 982 aa29.16■■■□□ 2.26
SHD-201ENST00000543264 FAM135BQ49AJ0 1406 aa29.15■■■□□ 2.26
SHD-201ENST00000543264 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.15■■■□□ 2.26
SHD-201ENST00000543264 OTUD7AQ8TE49 926 aaPredicted RBP29.15■■■□□ 2.26
SHD-201ENST00000543264 CHAMP1Q96JM3 812 aa29.15■■■□□ 2.26
SHD-201ENST00000543264 PRAM1Q96QH2 718 aa29.15■■■□□ 2.26
SHD-201ENST00000543264 ZNF500O60304 480 aaPredicted RBP29.14■■■□□ 2.26
SHD-201ENST00000543264 C8orf58Q8NAV2 365 aa29.14■■■□□ 2.26
SHD-201ENST00000543264 API5Q9BZZ5 524 aaKnown RBP29.14■■■□□ 2.26
SHD-201ENST00000543264 IFT57Q9NWB7 429 aa29.14■■■□□ 2.26
SHD-201ENST00000543264 ST18O60284 1047 aa29.13■■■□□ 2.25
SHD-201ENST00000543264 POLKQ9UBT6 870 aa29.13■■■□□ 2.25
SHD-201ENST00000543264 CD163L1Q9NR16 1453 aa29.13■■■□□ 2.25
SHD-201ENST00000543264 CABP1Q9NZU7 370 aa29.13■■■□□ 2.25
SHD-201ENST00000543264 ZDHHC9Q9Y397 364 aa29.13■■■□□ 2.25
SHD-201ENST00000543264 APBB1O00213 710 aa29.12■■■□□ 2.25
SHD-201ENST00000543264 FOXD4L5Q5VV16 416 aaPredicted RBP29.11■■■□□ 2.25
SHD-201ENST00000543264 FOXD4L4Q8WXT5 416 aaPredicted RBP29.11■■■□□ 2.25
SHD-201ENST00000543264 SDSP20132 328 aa29.11■■■□□ 2.25
SHD-201ENST00000543264 REREQ9P2R6 1566 aa29.1■■■□□ 2.25
SHD-201ENST00000543264 ANKRD26Q9UPS8 1709 aa29.1■■■□□ 2.25
SHD-201ENST00000543264 SYCE3A1L190 88 aa29.1■■■□□ 2.25
SHD-201ENST00000543264 TMEM63CQ9P1W3 806 aa29.1■■■□□ 2.25
SHD-201ENST00000543264 ZNF853P0CG23 659 aa29.09■■■□□ 2.25
SHD-201ENST00000543264 CASC1Q6TDU7 716 aa29.09■■■□□ 2.25
SHD-201ENST00000543264 ZKSCAN5Q9Y2L8 839 aa29.09■■■□□ 2.25
SHD-201ENST00000543264 UQCRHLA0A096LP55 91 aa29.08■■■□□ 2.25
SHD-201ENST00000543264 SMARCA5O60264 1052 aaPredicted RBP29.08■■■□□ 2.25
SHD-201ENST00000543264 UQCRHP07919 91 aa29.08■■■□□ 2.25
SHD-201ENST00000543264 NEXMIFQ5QGS0 1516 aa29.08■■■□□ 2.25
SHD-201ENST00000543264 LRSAM1Q6UWE0 723 aa29.08■■■□□ 2.25
SHD-201ENST00000543264 NSFL1CQ9UNZ2 370 aaKnown RBP29.08■■■□□ 2.25
SHD-201ENST00000543264 ZFYVE9O95405 1425 aa29.08■■■□□ 2.25
SHD-201ENST00000543264 CDK19Q9BWU1 502 aa29.08■■■□□ 2.24
SHD-201ENST00000543264 IDI1Q13907 227 aa29.06■■■□□ 2.24
SHD-201ENST00000543264 RNF214Q8ND24 703 aa29.05■■■□□ 2.24
SHD-201ENST00000543264 FAM83GA6ND36 823 aa29.04■■■□□ 2.24
SHD-201ENST00000543264 ANKRD44Q8N8A2 993 aa29.04■■■□□ 2.24
SHD-201ENST00000543264 KNDC1Q76NI1 1749 aa29.03■■■□□ 2.24
SHD-201ENST00000543264 EMILIN1Q9Y6C2 1016 aa29.03■■■□□ 2.24
SHD-201ENST00000543264 DCTN1Q14203 1278 aa29.02■■■□□ 2.24
SHD-201ENST00000543264 CSPP1Q1MSJ5 1256 aa29.02■■■□□ 2.24
SHD-201ENST00000543264 MAP7D2Q96T17 732 aa29.02■■■□□ 2.24
SHD-201ENST00000543264 CDC42BPGQ6DT37 1551 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms