RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 MS4A1P11836 297 aa18.31■□□□□ 0.52
LDB3-207ENST00000542786 MAP3K19Q56UN5 1328 aa18.3■□□□□ 0.52
LDB3-207ENST00000542786 ZNF853P0CG23 659 aa18.3■□□□□ 0.52
LDB3-207ENST00000542786 BCL2L13Q9BXK5 485 aa18.3■□□□□ 0.52
LDB3-207ENST00000542786 SBNO1A3KN83 1393 aa18.29■□□□□ 0.52
LDB3-207ENST00000542786 COG6Q9Y2V7 657 aa18.29■□□□□ 0.52
LDB3-207ENST00000542786 HSP90AB2PQ58FF8 381 aa18.29■□□□□ 0.52
LDB3-207ENST00000542786 AEBP1Q8IUX7 1158 aa18.29■□□□□ 0.52
LDB3-207ENST00000542786 SKAP1Q86WV1 359 aa18.28■□□□□ 0.52
LDB3-207ENST00000542786 SSH1Q8WYL5 1049 aa18.28■□□□□ 0.52
LDB3-207ENST00000542786 FRAT1Q92837 279 aaPredicted RBP18.28■□□□□ 0.52
LDB3-207ENST00000542786 ARHGEF10O15013 1369 aa18.27■□□□□ 0.52
LDB3-207ENST00000542786 NEFMP07197 916 aa18.27■□□□□ 0.52
LDB3-207ENST00000542786 THUMPD2Q9BTF0 503 aaKnown RBP18.27■□□□□ 0.52
LDB3-207ENST00000542786 FLT4P35916 1363 aa18.27■□□□□ 0.51
LDB3-207ENST00000542786 CANXP27824 592 aaKnown RBP18.26■□□□□ 0.51
LDB3-207ENST00000542786 AAMPQ13685 434 aa18.26■□□□□ 0.51
LDB3-207ENST00000542786 CLUAP1Q96AJ1 413 aa18.26■□□□□ 0.51
LDB3-207ENST00000542786 IFT57Q9NWB7 429 aa18.26■□□□□ 0.51
LDB3-207ENST00000542786 KDRP35968 1356 aa18.25■□□□□ 0.51
LDB3-207ENST00000542786 KIF24Q5T7B8 1368 aa18.25■□□□□ 0.51
LDB3-207ENST00000542786 MSH5O43196 834 aa18.24■□□□□ 0.51
LDB3-207ENST00000542786 CALD1Q05682 793 aaKnown RBP18.24■□□□□ 0.51
LDB3-207ENST00000542786 IGHDP01880 384 aa18.24■□□□□ 0.51
LDB3-207ENST00000542786 BRPF1P55201 1214 aaPredicted RBP18.24■□□□□ 0.51
LDB3-207ENST00000542786 ZKSCAN2Q63HK3 967 aa18.24■□□□□ 0.51
LDB3-207ENST00000542786 SULT6B1Q6IMI4 303 aa18.24■□□□□ 0.51
LDB3-207ENST00000542786 SMC4Q9NTJ3 1288 aa18.24■□□□□ 0.51
LDB3-207ENST00000542786 PHF8Q9UPP1 1060 aa18.24■□□□□ 0.51
LDB3-207ENST00000542786 LMOD3Q0VAK6 560 aa18.23■□□□□ 0.51
LDB3-207ENST00000542786 ALDH1L2Q3SY69 923 aa18.22■□□□□ 0.51
LDB3-207ENST00000542786 TRIM27P14373 513 aa18.22■□□□□ 0.51
LDB3-207ENST00000542786 GNAI1P63096 354 aa18.22■□□□□ 0.51
LDB3-207ENST00000542786 RBM33Q96EV2 1170 aaKnown RBP18.22■□□□□ 0.51
LDB3-207ENST00000542786 IGSF1Q8N6C5 1336 aa18.22■□□□□ 0.51
LDB3-207ENST00000542786 NFAT5O94916 1531 aa18.22■□□□□ 0.51
LDB3-207ENST00000542786 PDE4AP27815 886 aa18.21■□□□□ 0.51
LDB3-207ENST00000542786 MVPQ14764 893 aaKnown RBP18.21■□□□□ 0.51
LDB3-207ENST00000542786 ZNF428Q96B54 188 aa18.21■□□□□ 0.51
LDB3-207ENST00000542786 BACH2Q9BYV9 841 aa18.21■□□□□ 0.51
LDB3-207ENST00000542786 MBIPQ9NS73 344 aa18.21■□□□□ 0.51
LDB3-207ENST00000542786 NLRP6P59044 892 aa18.2■□□□□ 0.5
LDB3-207ENST00000542786 DZIP1LQ8IYY4 767 aaKnown RBP18.2■□□□□ 0.5
LDB3-207ENST00000542786 CFAP44Q96MT7 982 aa18.2■□□□□ 0.5
LDB3-207ENST00000542786 FAM83GA6ND36 823 aa18.2■□□□□ 0.5
LDB3-207ENST00000542786 SOX12O15370 315 aa18.2■□□□□ 0.5
LDB3-207ENST00000542786 VAMP4O75379 141 aa18.2■□□□□ 0.5
LDB3-207ENST00000542786 PCDHB15Q9Y5E8 787 aa18.2■□□□□ 0.5
LDB3-207ENST00000542786 ATF7IPQ6VMQ6 1270 aa18.19■□□□□ 0.5
LDB3-207ENST00000542786 KIF16BQ96L93 1317 aa18.18■□□□□ 0.5
LDB3-207ENST00000542786 TSPYL6Q8N831 410 aa18.18■□□□□ 0.5
LDB3-207ENST00000542786 NOB1Q9ULX3 412 aaKnown RBP18.18■□□□□ 0.5
LDB3-207ENST00000542786 RTL1A6NKG5 1358 aa18.17■□□□□ 0.5
LDB3-207ENST00000542786 HOXC9P31274 260 aa18.17■□□□□ 0.5
LDB3-207ENST00000542786 EYA1Q99502 592 aa18.17■□□□□ 0.5
LDB3-207ENST00000542786 CRB1P82279 1406 aa18.17■□□□□ 0.5
LDB3-207ENST00000542786 PHRF1Q9P1Y6 1649 aaKnown RBP18.17■□□□□ 0.5
LDB3-207ENST00000542786 DCTN1Q14203 1278 aa18.16■□□□□ 0.5
LDB3-207ENST00000542786 LAS1LQ9Y4W2 734 aaKnown RBP18.16■□□□□ 0.5
LDB3-207ENST00000542786 AMPHP49418 695 aa18.16■□□□□ 0.5
LDB3-207ENST00000542786 NUTM2GQ5VZR2 741 aa18.16■□□□□ 0.5
LDB3-207ENST00000542786 MRPL50Q8N5N7 158 aaKnown RBP18.16■□□□□ 0.5
LDB3-207ENST00000542786 ABTB2Q8N961 1025 aa18.16■□□□□ 0.5
LDB3-207ENST00000542786 LRRC37A3O60309 1634 aa18.15■□□□□ 0.5
LDB3-207ENST00000542786 TRPM3Q9HCF6 1732 aaPredicted RBP18.14■□□□□ 0.5
LDB3-207ENST00000542786 LTN1O94822 1766 aa18.14■□□□□ 0.49
LDB3-207ENST00000542786 CHL1O00533 1208 aa18.14■□□□□ 0.49
LDB3-207ENST00000542786 FTSJ3Q8IY81 847 aaKnown RBP18.14■□□□□ 0.49
LDB3-207ENST00000542786 C8orf58Q8NAV2 365 aa18.14■□□□□ 0.49
LDB3-207ENST00000542786 SLIT3O75094 1523 aa18.13■□□□□ 0.49
LDB3-207ENST00000542786 IPO8O15397 1037 aaKnown RBP18.12■□□□□ 0.49
LDB3-207ENST00000542786 ESCO1Q5FWF5 840 aa18.12■□□□□ 0.49
LDB3-207ENST00000542786 TMEM57Q8N5G2 664 aa18.12■□□□□ 0.49
LDB3-207ENST00000542786 STRCP1A6NGW2 1772 aa18.12■□□□□ 0.49
LDB3-207ENST00000542786 MTHFSDQ2M296 383 aaKnown RBP18.12■□□□□ 0.49
LDB3-207ENST00000542786 ARHGAP45Q92619 1136 aa18.12■□□□□ 0.49
LDB3-207ENST00000542786 MST1RQ04912 1400 aa18.11■□□□□ 0.49
LDB3-207ENST00000542786 KIF1AQ12756 1690 aa18.11■□□□□ 0.49
LDB3-207ENST00000542786 KIAA0232Q92628 1395 aa18.11■□□□□ 0.49
LDB3-207ENST00000542786 PAK3O75914 559 aaPredicted RBP18.11■□□□□ 0.49
LDB3-207ENST00000542786 TWISTNBQ3B726 338 aaPredicted RBP18.11■□□□□ 0.49
LDB3-207ENST00000542786 MCM10Q7L590 875 aa18.11■□□□□ 0.49
LDB3-207ENST00000542786 ORAI2Q96SN7 254 aa18.11■□□□□ 0.49
LDB3-207ENST00000542786 DDX19BQ9UMR2 479 aa18.11■□□□□ 0.49
LDB3-207ENST00000542786 C1orf167Q5SNV9 1468 aa18.1■□□□□ 0.49
LDB3-207ENST00000542786 FOXO3O43524 673 aa18.1■□□□□ 0.49
LDB3-207ENST00000542786 C8orf34Q49A92 452 aa18.09■□□□□ 0.49
LDB3-207ENST00000542786 ZBTB40Q9NUA8 1239 aa18.09■□□□□ 0.49
LDB3-207ENST00000542786 PROSER2Q86WR7 435 aaPredicted RBP18.08■□□□□ 0.49
LDB3-207ENST00000542786 IP6K1Q92551 441 aa18.08■□□□□ 0.49
LDB3-207ENST00000542786 ABCC4O15439 1325 aa18.08■□□□□ 0.48
LDB3-207ENST00000542786 MSH6P52701 1360 aa18.08■□□□□ 0.48
LDB3-207ENST00000542786 PSME1Q06323 249 aa18.07■□□□□ 0.48
LDB3-207ENST00000542786 HDAC1Q13547 482 aaPredicted RBP18.07■□□□□ 0.48
LDB3-207ENST00000542786 ITPRIPQ8IWB1 547 aa18.07■□□□□ 0.48
LDB3-207ENST00000542786 USP19O94966 1318 aa18.07■□□□□ 0.48
LDB3-207ENST00000542786 NCAPD2Q15021 1401 aa18.06■□□□□ 0.48
LDB3-207ENST00000542786 ELL2O00472 640 aaPredicted RBP18.06■□□□□ 0.48
LDB3-207ENST00000542786 RGS3P49796 1198 aa18.06■□□□□ 0.48
LDB3-207ENST00000542786 FAM161AQ3B820 660 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms