RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 NALCNQ8IZF0 1738 aa8.36□□□□□ -1.07
PTPRO-208ENST00000542557 TRIM27P14373 513 aa8.36□□□□□ -1.07
PTPRO-208ENST00000542557 PRKAR2BP31323 418 aa8.36□□□□□ -1.07
PTPRO-208ENST00000542557 ZNF692Q9BU19 519 aaPredicted RBP8.36□□□□□ -1.07
PTPRO-208ENST00000542557 IL13P35225 146 aa8.35□□□□□ -1.07
PTPRO-208ENST00000542557 NFE2L2Q16236 605 aa8.35□□□□□ -1.07
PTPRO-208ENST00000542557 TXNDC2Q86VQ3 553 aa8.35□□□□□ -1.07
PTPRO-208ENST00000542557 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.35□□□□□ -1.07
PTPRO-208ENST00000542557 HDAC1Q13547 482 aaPredicted RBP8.35□□□□□ -1.07
PTPRO-208ENST00000542557 ROBO2Q9HCK4 1378 aa8.35□□□□□ -1.07
PTPRO-208ENST00000542557 SLIT1O75093 1534 aa8.35□□□□□ -1.07
PTPRO-208ENST00000542557 IPO8O15397 1037 aaKnown RBP8.34□□□□□ -1.07
PTPRO-208ENST00000542557 NME9Q86XW9 330 aa8.34□□□□□ -1.07
PTPRO-208ENST00000542557 COG3Q96JB2 828 aa8.34□□□□□ -1.07
PTPRO-208ENST00000542557 DEKP35659 375 aaKnown RBP8.34□□□□□ -1.07
PTPRO-208ENST00000542557 PDZRN3Q9UPQ7 1066 aa8.34□□□□□ -1.07
PTPRO-208ENST00000542557 EMILIN1Q9Y6C2 1016 aa8.34□□□□□ -1.07
PTPRO-208ENST00000542557 PRR36Q9H6K5 1346 aa8.34□□□□□ -1.07
PTPRO-208ENST00000542557 OVOS2A0A0J9YW53 1432 aa8.34□□□□□ -1.07
PTPRO-208ENST00000542557 OVOS2Q6IE36 1432 aa8.34□□□□□ -1.07
PTPRO-208ENST00000542557 ARHGAP23Q9P227 1491 aa8.34□□□□□ -1.07
PTPRO-208ENST00000542557 DLG5Q8TDM6 1919 aa8.34□□□□□ -1.08
PTPRO-208ENST00000542557 DIP2AQ14689 1571 aa8.33□□□□□ -1.08
PTPRO-208ENST00000542557 PTCH1Q13635 1447 aa8.33□□□□□ -1.08
PTPRO-208ENST00000542557 USP19O94966 1318 aa8.33□□□□□ -1.08
PTPRO-208ENST00000542557 LMOD3Q0VAK6 560 aa8.33□□□□□ -1.08
PTPRO-208ENST00000542557 IFT57Q9NWB7 429 aa8.33□□□□□ -1.08
PTPRO-208ENST00000542557 PIK3R4Q99570 1358 aa8.33□□□□□ -1.08
PTPRO-208ENST00000542557 RIMS1Q86UR5 1692 aaKnown RBP8.33□□□□□ -1.08
PTPRO-208ENST00000542557 NOB1Q9ULX3 412 aaKnown RBP8.33□□□□□ -1.08
PTPRO-208ENST00000542557 ZNF853P0CG23 659 aa8.32□□□□□ -1.08
PTPRO-208ENST00000542557 GNAI1P63096 354 aa8.32□□□□□ -1.08
PTPRO-208ENST00000542557 LAS1LQ9Y4W2 734 aaKnown RBP8.32□□□□□ -1.08
PTPRO-208ENST00000542557 RGPD1P0DJD0 1748 aa8.32□□□□□ -1.08
PTPRO-208ENST00000542557 PLEKHG3A1L390 1219 aa8.32□□□□□ -1.08
PTPRO-208ENST00000542557 ITPRIPQ8IWB1 547 aa8.32□□□□□ -1.08
PTPRO-208ENST00000542557 ARHGAP45Q92619 1136 aa8.32□□□□□ -1.08
PTPRO-208ENST00000542557 PHACTR3Q96KR7 559 aa8.32□□□□□ -1.08
PTPRO-208ENST00000542557 ZBTB40Q9NUA8 1239 aa8.32□□□□□ -1.08
PTPRO-208ENST00000542557 USP6P35125 1406 aa8.32□□□□□ -1.08
PTPRO-208ENST00000542557 FBLN1P23142 703 aa8.31□□□□□ -1.08
PTPRO-208ENST00000542557 SMC5Q8IY18 1101 aa8.31□□□□□ -1.08
PTPRO-208ENST00000542557 TMEM57Q8N5G2 664 aa8.31□□□□□ -1.08
PTPRO-208ENST00000542557 USP31Q70CQ4 1352 aa8.31□□□□□ -1.08
PTPRO-208ENST00000542557 HMOX1P09601 288 aa8.31□□□□□ -1.08
PTPRO-208ENST00000542557 CHMP4BQ9H444 224 aaKnown RBP8.31□□□□□ -1.08
PTPRO-208ENST00000542557 SSH2Q76I76 1423 aa8.31□□□□□ -1.08
PTPRO-208ENST00000542557 TTC21BQ7Z4L5 1316 aa8.31□□□□□ -1.08
PTPRO-208ENST00000542557 ZRANB1Q9UGI0 708 aa8.3□□□□□ -1.08
PTPRO-208ENST00000542557 PTPRUQ92729 1446 aa8.3□□□□□ -1.08
PTPRO-208ENST00000542557 NCKAP5LQ9HCH0 1330 aa8.3□□□□□ -1.08
PTPRO-208ENST00000542557 FER1L4A9Z1Z3 1794 aa8.3□□□□□ -1.08
PTPRO-208ENST00000542557 PEAK1Q9H792 1746 aa8.3□□□□□ -1.08
PTPRO-208ENST00000542557 VAMP4O75379 141 aa8.3□□□□□ -1.08
PTPRO-208ENST00000542557 LTKP29376 864 aa8.3□□□□□ -1.08
PTPRO-208ENST00000542557 CFAP44Q96MT7 982 aa8.3□□□□□ -1.08
PTPRO-208ENST00000542557 UPF2Q9HAU5 1272 aaKnown RBP8.3□□□□□ -1.08
PTPRO-208ENST00000542557 XRN1Q8IZH2 1706 aaKnown RBP8.29□□□□□ -1.08
PTPRO-208ENST00000542557 RRS1Q15050 365 aaKnown RBP8.29□□□□□ -1.08
PTPRO-208ENST00000542557 MRPL50Q8N5N7 158 aaKnown RBP8.29□□□□□ -1.08
PTPRO-208ENST00000542557 FMN2Q9NZ56 1722 aa8.29□□□□□ -1.08
PTPRO-208ENST00000542557 ACEP12821 1306 aa8.29□□□□□ -1.08
PTPRO-208ENST00000542557 SEC24BO95487 1268 aa8.29□□□□□ -1.08
PTPRO-208ENST00000542557 TBC1D32Q96NH3 1257 aa8.29□□□□□ -1.08
PTPRO-208ENST00000542557 KIF24Q5T7B8 1368 aa8.29□□□□□ -1.08
PTPRO-208ENST00000542557 ABCC4O15439 1325 aa8.28□□□□□ -1.08
PTPRO-208ENST00000542557 BECN1Q14457 450 aa8.28□□□□□ -1.08
PTPRO-208ENST00000542557 MBIPQ9NS73 344 aa8.28□□□□□ -1.08
PTPRO-208ENST00000542557 EID1Q9Y6B2 187 aa8.28□□□□□ -1.08
PTPRO-208ENST00000542557 USP54Q70EL1 1684 aa8.28□□□□□ -1.08
PTPRO-208ENST00000542557 TTC21AQ8NDW8 1320 aa8.28□□□□□ -1.08
PTPRO-208ENST00000542557 SLC4A3P48751 1232 aa8.28□□□□□ -1.08
PTPRO-208ENST00000542557 TBX22Q9Y458 520 aa8.28□□□□□ -1.08
PTPRO-208ENST00000542557 EIF4A2Q14240 407 aaKnown RBP8.27□□□□□ -1.09
PTPRO-208ENST00000542557 THUMPD2Q9BTF0 503 aaKnown RBP8.27□□□□□ -1.09
PTPRO-208ENST00000542557 ARHGEF10O15013 1369 aa8.27□□□□□ -1.09
PTPRO-208ENST00000542557 NFKBIBQ15653 356 aa8.27□□□□□ -1.09
PTPRO-208ENST00000542557 ANKARQ7Z5J8 1434 aa8.27□□□□□ -1.09
PTPRO-208ENST00000542557 NUCB1Q02818 461 aa8.26□□□□□ -1.09
PTPRO-208ENST00000542557 TWISTNBQ3B726 338 aaPredicted RBP8.26□□□□□ -1.09
PTPRO-208ENST00000542557 POTEDQ86YR6 584 aa8.26□□□□□ -1.09
PTPRO-208ENST00000542557 TSPYL6Q8N831 410 aa8.26□□□□□ -1.09
PTPRO-208ENST00000542557 ZBTB7BO15156 539 aaPredicted RBP8.26□□□□□ -1.09
PTPRO-208ENST00000542557 API5Q9BZZ5 524 aaKnown RBP8.26□□□□□ -1.09
PTPRO-208ENST00000542557 KIAA0232Q92628 1395 aa8.26□□□□□ -1.09
PTPRO-208ENST00000542557 GCC1Q96CN9 775 aa8.26□□□□□ -1.09
PTPRO-208ENST00000542557 BCL11AQ9H165 835 aa8.26□□□□□ -1.09
PTPRO-208ENST00000542557 PIK3C2AO00443 1686 aa8.26□□□□□ -1.09
PTPRO-208ENST00000542557 NPM3O75607 178 aaKnown RBP8.25□□□□□ -1.09
PTPRO-208ENST00000542557 SBNO1A3KN83 1393 aa8.25□□□□□ -1.09
PTPRO-208ENST00000542557 FLT4P35916 1363 aa8.25□□□□□ -1.09
PTPRO-208ENST00000542557 SULT6B1Q6IMI4 303 aa8.25□□□□□ -1.09
PTPRO-208ENST00000542557 AMOTL2Q9Y2J4 779 aa8.25□□□□□ -1.09
PTPRO-208ENST00000542557 KDRP35968 1356 aa8.25□□□□□ -1.09
PTPRO-208ENST00000542557 C8orf58Q8NAV2 365 aa8.24□□□□□ -1.09
PTPRO-208ENST00000542557 LRRC37A3O60309 1634 aa8.24□□□□□ -1.09
PTPRO-208ENST00000542557 CHD1LQ86WJ1 897 aa8.24□□□□□ -1.09
PTPRO-208ENST00000542557 AEBP1Q8IUX7 1158 aa8.24□□□□□ -1.09
PTPRO-208ENST00000542557 THEMISQ8N1K5 641 aaPredicted RBP8.24□□□□□ -1.09
PTPRO-208ENST00000542557 SLC26A8Q96RN1 970 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms