RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 EXOSC9Q06265 439 aaKnown RBP22.41■■□□□ 1.18
TMEM50B-210ENST00000542230 PNNQ9H307 717 aaKnown RBP22.41■■□□□ 1.18
TMEM50B-210ENST00000542230 NFE2L2Q16236 605 aa22.41■■□□□ 1.18
TMEM50B-210ENST00000542230 PROSER2Q86WR7 435 aaPredicted RBP22.41■■□□□ 1.18
TMEM50B-210ENST00000542230 FRAT1Q92837 279 aaPredicted RBP22.41■■□□□ 1.18
TMEM50B-210ENST00000542230 FAM83GA6ND36 823 aa22.39■■□□□ 1.18
TMEM50B-210ENST00000542230 PLEKHG5O94827 1062 aa22.39■■□□□ 1.18
TMEM50B-210ENST00000542230 SKAP1Q86WV1 359 aa22.39■■□□□ 1.18
TMEM50B-210ENST00000542230 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.39■■□□□ 1.17
TMEM50B-210ENST00000542230 PANK1Q8TE04 598 aa22.39■■□□□ 1.17
TMEM50B-210ENST00000542230 LAS1LQ9Y4W2 734 aaKnown RBP22.38■■□□□ 1.17
TMEM50B-210ENST00000542230 DCTN1Q14203 1278 aa22.38■■□□□ 1.17
TMEM50B-210ENST00000542230 FOXO3O43524 673 aa22.37■■□□□ 1.17
TMEM50B-210ENST00000542230 RBM19Q9Y4C8 960 aaKnown RBP22.37■■□□□ 1.17
TMEM50B-210ENST00000542230 NEFMP07197 916 aa22.36■■□□□ 1.17
TMEM50B-210ENST00000542230 MARF1Q9Y4F3 1742 aaKnown RBP22.36■■□□□ 1.17
TMEM50B-210ENST00000542230 KDM4FA0A1W2PPD8 638 aa22.35■■□□□ 1.17
TMEM50B-210ENST00000542230 AMPHP49418 695 aa22.35■■□□□ 1.17
TMEM50B-210ENST00000542230 PSME1Q06323 249 aa22.35■■□□□ 1.17
TMEM50B-210ENST00000542230 RLBP1P12271 317 aa22.34■■□□□ 1.17
TMEM50B-210ENST00000542230 CANXP27824 592 aaKnown RBP22.34■■□□□ 1.17
TMEM50B-210ENST00000542230 COG6Q9Y2V7 657 aa22.33■■□□□ 1.17
TMEM50B-210ENST00000542230 IL16Q14005 1332 aa22.33■■□□□ 1.16
TMEM50B-210ENST00000542230 SBNO1A3KN83 1393 aa22.32■■□□□ 1.16
TMEM50B-210ENST00000542230 NWD1Q149M9 1564 aa22.32■■□□□ 1.16
TMEM50B-210ENST00000542230 CLUAP1Q96AJ1 413 aa22.32■■□□□ 1.16
TMEM50B-210ENST00000542230 FLT4P35916 1363 aa22.32■■□□□ 1.16
TMEM50B-210ENST00000542230 DLG5Q8TDM6 1919 aa22.31■■□□□ 1.16
TMEM50B-210ENST00000542230 LTV1Q96GA3 475 aaPredicted RBP22.31■■□□□ 1.16
TMEM50B-210ENST00000542230 EYA1Q99502 592 aa22.31■■□□□ 1.16
TMEM50B-210ENST00000542230 SSH1Q8WYL5 1049 aa22.3■■□□□ 1.16
TMEM50B-210ENST00000542230 HOXC9P31274 260 aa22.3■■□□□ 1.16
TMEM50B-210ENST00000542230 STRCP1A6NGW2 1772 aa22.29■■□□□ 1.16
TMEM50B-210ENST00000542230 DDX17Q92841 729 aaKnown RBP22.28■■□□□ 1.16
TMEM50B-210ENST00000542230 TMEM94Q12767 1356 aa22.28■■□□□ 1.16
TMEM50B-210ENST00000542230 RGPD1P0DJD0 1748 aa22.28■■□□□ 1.16
TMEM50B-210ENST00000542230 TSPYL6Q8N831 410 aa22.27■■□□□ 1.16
TMEM50B-210ENST00000542230 C19orf44Q9H6X5 657 aa22.27■■□□□ 1.16
TMEM50B-210ENST00000542230 ZBTB7CA1YPR0 619 aa22.27■■□□□ 1.16
TMEM50B-210ENST00000542230 ELL2O00472 640 aaPredicted RBP22.27■■□□□ 1.16
TMEM50B-210ENST00000542230 PDE3AQ14432 1141 aa22.27■■□□□ 1.16
TMEM50B-210ENST00000542230 LMOD2Q6P5Q4 547 aa22.27■■□□□ 1.16
TMEM50B-210ENST00000542230 MCM10Q7L590 875 aa22.27■■□□□ 1.16
TMEM50B-210ENST00000542230 MBIPQ9NS73 344 aa22.26■■□□□ 1.15
TMEM50B-210ENST00000542230 SMC4Q9NTJ3 1288 aa22.26■■□□□ 1.15
TMEM50B-210ENST00000542230 ZNF853P0CG23 659 aa22.25■■□□□ 1.15
TMEM50B-210ENST00000542230 KDM2BQ8NHM5 1336 aa22.24■■□□□ 1.15
TMEM50B-210ENST00000542230 USHBP1Q8N6Y0 703 aa22.24■■□□□ 1.15
TMEM50B-210ENST00000542230 C1orf167Q5SNV9 1468 aa22.23■■□□□ 1.15
TMEM50B-210ENST00000542230 TCERG1O14776 1098 aaKnown RBP22.23■■□□□ 1.15
TMEM50B-210ENST00000542230 MTHFSDQ2M296 383 aaKnown RBP22.23■■□□□ 1.15
TMEM50B-210ENST00000542230 IGSF1Q8N6C5 1336 aa22.22■■□□□ 1.15
TMEM50B-210ENST00000542230 ARHGEF10O15013 1369 aa22.22■■□□□ 1.15
TMEM50B-210ENST00000542230 IFT57Q9NWB7 429 aa22.21■■□□□ 1.15
TMEM50B-210ENST00000542230 KRT28Q7Z3Y7 464 aa22.21■■□□□ 1.15
TMEM50B-210ENST00000542230 C8orf58Q8NAV2 365 aa22.21■■□□□ 1.15
TMEM50B-210ENST00000542230 NOB1Q9ULX3 412 aaKnown RBP22.21■■□□□ 1.15
TMEM50B-210ENST00000542230 CT47B1P0C2W7 299 aaPredicted RBP22.2■■□□□ 1.15
TMEM50B-210ENST00000542230 GNAI1P63096 354 aa22.2■■□□□ 1.15
TMEM50B-210ENST00000542230 IGHDP01880 384 aa22.2■■□□□ 1.14
TMEM50B-210ENST00000542230 TRIM27P14373 513 aa22.2■■□□□ 1.14
TMEM50B-210ENST00000542230 KRT24Q2M2I5 525 aa22.2■■□□□ 1.14
TMEM50B-210ENST00000542230 CFAP44Q96MT7 982 aa22.2■■□□□ 1.14
TMEM50B-210ENST00000542230 KDRP35968 1356 aa22.2■■□□□ 1.14
TMEM50B-210ENST00000542230 USP54Q70EL1 1684 aa22.19■■□□□ 1.14
TMEM50B-210ENST00000542230 VAMP4O75379 141 aa22.19■■□□□ 1.14
TMEM50B-210ENST00000542230 NFAT5O94916 1531 aa22.19■■□□□ 1.14
TMEM50B-210ENST00000542230 ATF3P18847 181 aa22.19■■□□□ 1.14
TMEM50B-210ENST00000542230 ZKSCAN2Q63HK3 967 aa22.19■■□□□ 1.14
TMEM50B-210ENST00000542230 MIS18AQ9NYP9 233 aa22.19■■□□□ 1.14
TMEM50B-210ENST00000542230 LMOD3Q0VAK6 560 aa22.18■■□□□ 1.14
TMEM50B-210ENST00000542230 LMTK3Q96Q04 1460 aa22.18■■□□□ 1.14
TMEM50B-210ENST00000542230 LTN1O94822 1766 aa22.17■■□□□ 1.14
TMEM50B-210ENST00000542230 GCP02774 474 aa22.17■■□□□ 1.14
TMEM50B-210ENST00000542230 CALD1Q05682 793 aaKnown RBP22.17■■□□□ 1.14
TMEM50B-210ENST00000542230 MST1RQ04912 1400 aa22.16■■□□□ 1.14
TMEM50B-210ENST00000542230 IP6K1Q92551 441 aa22.16■■□□□ 1.14
TMEM50B-210ENST00000542230 DZIP1LQ8IYY4 767 aaKnown RBP22.16■■□□□ 1.14
TMEM50B-210ENST00000542230 NBPF6Q5VWK0 638 aa22.15■■□□□ 1.14
TMEM50B-210ENST00000542230 LRRC59Q96AG4 307 aaKnown RBP22.15■■□□□ 1.14
TMEM50B-210ENST00000542230 NBPF4Q96M43 638 aa22.15■■□□□ 1.14
TMEM50B-210ENST00000542230 PCDHB15Q9Y5E8 787 aa22.15■■□□□ 1.14
TMEM50B-210ENST00000542230 ATF7IPQ6VMQ6 1270 aa22.14■■□□□ 1.13
TMEM50B-210ENST00000542230 CENPQQ7L2Z9 268 aaPredicted RBP22.14■■□□□ 1.13
TMEM50B-210ENST00000542230 FTSJ3Q8IY81 847 aaKnown RBP22.14■■□□□ 1.13
TMEM50B-210ENST00000542230 TWISTNBQ3B726 338 aaPredicted RBP22.13■■□□□ 1.13
TMEM50B-210ENST00000542230 KIF24Q5T7B8 1368 aa22.13■■□□□ 1.13
TMEM50B-210ENST00000542230 STRCQ7RTU9 1775 aa22.13■■□□□ 1.13
TMEM50B-210ENST00000542230 MVPQ14764 893 aaKnown RBP22.12■■□□□ 1.13
TMEM50B-210ENST00000542230 AXIN2Q9Y2T1 843 aa22.12■■□□□ 1.13
TMEM50B-210ENST00000542230 ZNF335Q9H4Z2 1342 aaPredicted RBP22.12■■□□□ 1.13
TMEM50B-210ENST00000542230 KCNH5Q8NCM2 988 aa22.12■■□□□ 1.13
TMEM50B-210ENST00000542230 TRPM3Q9HCF6 1732 aaPredicted RBP22.11■■□□□ 1.13
TMEM50B-210ENST00000542230 CHL1O00533 1208 aa22.11■■□□□ 1.13
TMEM50B-210ENST00000542230 ARHGEF25Q86VW2 580 aa22.11■■□□□ 1.13
TMEM50B-210ENST00000542230 CRB1P82279 1406 aa22.11■■□□□ 1.13
TMEM50B-210ENST00000542230 TMEM57Q8N5G2 664 aa22.11■■□□□ 1.13
TMEM50B-210ENST00000542230 ALDH1L2Q3SY69 923 aa22.1■■□□□ 1.13
TMEM50B-210ENST00000542230 MRPL50Q8N5N7 158 aaKnown RBP22.1■■□□□ 1.13
TMEM50B-210ENST00000542230 ZC3H6P61129 1189 aaKnown RBP22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms