RNA–Protein interactions for RNA: ENST00000542113.1

NKRF-204, Transcript of NFKB repressing factor, humanhuman

TSL 3 BASIC

Gene NKRF, Length 3,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-204ENST00000542113 NCOA3Q9Y6Q9 1424 aa8.48□□□□□ -1.05
NKRF-204ENST00000542113 SPATA31D1Q6ZQQ2 1576 aa8.48□□□□□ -1.05
NKRF-204ENST00000542113 A2ML1A8K2U0 1454 aa8.47□□□□□ -1.05
NKRF-204ENST00000542113 CPSF1Q10570 1443 aaKnown RBP8.47□□□□□ -1.05
NKRF-204ENST00000542113 MRPL50Q8N5N7 158 aaKnown RBP8.47□□□□□ -1.05
NKRF-204ENST00000542113 SIRT1Q96EB6 747 aa8.47□□□□□ -1.05
NKRF-204ENST00000542113 ABCC4O15439 1325 aa8.47□□□□□ -1.05
NKRF-204ENST00000542113 HSP90AB1P08238 724 aaKnown RBP8.47□□□□□ -1.05
NKRF-204ENST00000542113 COG3Q96JB2 828 aa8.47□□□□□ -1.05
NKRF-204ENST00000542113 LNPKQ9C0E8 428 aa8.47□□□□□ -1.05
NKRF-204ENST00000542113 VAMP4O75379 141 aa8.47□□□□□ -1.05
NKRF-204ENST00000542113 SKOR2Q2VWA4 1001 aaPredicted RBP8.47□□□□□ -1.05
NKRF-204ENST00000542113 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.47□□□□□ -1.05
NKRF-204ENST00000542113 ZBTB7BO15156 539 aaPredicted RBP8.46□□□□□ -1.05
NKRF-204ENST00000542113 WASLO00401 505 aaPredicted RBP8.46□□□□□ -1.06
NKRF-204ENST00000542113 ZNF853P0CG23 659 aa8.46□□□□□ -1.06
NKRF-204ENST00000542113 ZNF692Q9BU19 519 aaPredicted RBP8.46□□□□□ -1.06
NKRF-204ENST00000542113 IL13P35225 146 aa8.45□□□□□ -1.06
NKRF-204ENST00000542113 MRE11P49959 708 aa8.45□□□□□ -1.06
NKRF-204ENST00000542113 TWISTNBQ3B726 338 aaPredicted RBP8.45□□□□□ -1.06
NKRF-204ENST00000542113 ANKRD45Q5TZF3 282 aa8.45□□□□□ -1.06
NKRF-204ENST00000542113 TRAK2O60296 914 aa8.45□□□□□ -1.06
NKRF-204ENST00000542113 CDC45O75419 566 aa8.45□□□□□ -1.06
NKRF-204ENST00000542113 HSP90AA1P07900 732 aaKnown RBP8.45□□□□□ -1.06
NKRF-204ENST00000542113 RIMBP3CA6NJZ7 1639 aa8.45□□□□□ -1.06
NKRF-204ENST00000542113 RIMBP3BA6NNM3 1639 aa8.45□□□□□ -1.06
NKRF-204ENST00000542113 RIMBP3Q9UFD9 1639 aa8.45□□□□□ -1.06
NKRF-204ENST00000542113 GOLGA6L22H0YM25 854 aa8.45□□□□□ -1.06
NKRF-204ENST00000542113 TECPR2O15040 1411 aa8.45□□□□□ -1.06
NKRF-204ENST00000542113 KNDC1Q76NI1 1749 aa8.45□□□□□ -1.06
NKRF-204ENST00000542113 SETD1AO15047 1707 aaKnown RBP8.44□□□□□ -1.06
NKRF-204ENST00000542113 FSD2A1L4K1 749 aa8.44□□□□□ -1.06
NKRF-204ENST00000542113 FBXO31Q5XUX0 539 aaPredicted RBP8.44□□□□□ -1.06
NKRF-204ENST00000542113 MBIPQ9NS73 344 aa8.44□□□□□ -1.06
NKRF-204ENST00000542113 CCDC61Q9Y6R9 512 aa8.44□□□□□ -1.06
NKRF-204ENST00000542113 HMOX1P09601 288 aa8.44□□□□□ -1.06
NKRF-204ENST00000542113 CASC1Q6TDU7 716 aa8.44□□□□□ -1.06
NKRF-204ENST00000542113 MON2Q7Z3U7 1717 aa8.43□□□□□ -1.06
NKRF-204ENST00000542113 MAP2P11137 1827 aaKnown RBP8.43□□□□□ -1.06
NKRF-204ENST00000542113 K7ELQ4 463 aaPredicted RBP8.43□□□□□ -1.06
NKRF-204ENST00000542113 SPRYD3Q8NCJ5 442 aa8.43□□□□□ -1.06
NKRF-204ENST00000542113 CPS1P31327 1500 aa8.43□□□□□ -1.06
NKRF-204ENST00000542113 DDIT3P35638 169 aa8.42□□□□□ -1.06
NKRF-204ENST00000542113 RPAP2Q8IXW5 612 aaPredicted RBP8.42□□□□□ -1.06
NKRF-204ENST00000542113 PHACTR3Q96KR7 559 aa8.42□□□□□ -1.06
NKRF-204ENST00000542113 EMILIN1Q9Y6C2 1016 aa8.42□□□□□ -1.06
NKRF-204ENST00000542113 NRKQ7Z2Y5 1582 aa8.42□□□□□ -1.06
NKRF-204ENST00000542113 KIAA0232Q92628 1395 aa8.42□□□□□ -1.06
NKRF-204ENST00000542113 WAPLQ7Z5K2 1190 aa8.42□□□□□ -1.06
NKRF-204ENST00000542113 NUDT16Q96DE0 195 aaKnown RBP8.42□□□□□ -1.06
NKRF-204ENST00000542113 ESF1Q9H501 851 aaKnown RBP8.42□□□□□ -1.06
NKRF-204ENST00000542113 PTPRCP08575 1304 aa8.42□□□□□ -1.06
NKRF-204ENST00000542113 RAB3GAP1Q15042 981 aa8.42□□□□□ -1.06
NKRF-204ENST00000542113 RABEP1Q15276 862 aa8.42□□□□□ -1.06
NKRF-204ENST00000542113 TBC1D9Q6ZT07 1266 aa8.42□□□□□ -1.06
NKRF-204ENST00000542113 ITSN1Q15811 1721 aa8.42□□□□□ -1.06
NKRF-204ENST00000542113 INTS3Q68E01 1043 aaKnown RBP8.41□□□□□ -1.06
NKRF-204ENST00000542113 NME9Q86XW9 330 aa8.41□□□□□ -1.06
NKRF-204ENST00000542113 HMMRO75330 724 aa8.41□□□□□ -1.06
NKRF-204ENST00000542113 DCTPP1Q9H773 170 aa8.41□□□□□ -1.06
NKRF-204ENST00000542113 C3P01024 1663 aa8.41□□□□□ -1.06
NKRF-204ENST00000542113 TTC21BQ7Z4L5 1316 aa8.4□□□□□ -1.06
NKRF-204ENST00000542113 AKAP12Q02952 1782 aa8.4□□□□□ -1.06
NKRF-204ENST00000542113 DIP2BQ9P265 1576 aa8.4□□□□□ -1.06
NKRF-204ENST00000542113 XRCC6P12956 609 aaKnown RBP eCLIP8.4□□□□□ -1.06
NKRF-204ENST00000542113 TSPYL6Q8N831 410 aa8.4□□□□□ -1.06
NKRF-204ENST00000542113 ANKRD44Q8N8A2 993 aa8.4□□□□□ -1.07
NKRF-204ENST00000542113 TNPO1Q92973 898 aaKnown RBP8.4□□□□□ -1.07
NKRF-204ENST00000542113 NRXN3Q9Y4C0 1643 aa8.39□□□□□ -1.07
NKRF-204ENST00000542113 THUMPD2Q9BTF0 503 aaKnown RBP8.39□□□□□ -1.07
NKRF-204ENST00000542113 NUCB2P80303 420 aa8.39□□□□□ -1.07
NKRF-204ENST00000542113 FAM69CQ0P6D2 419 aa8.39□□□□□ -1.07
NKRF-204ENST00000542113 C1orf115Q9H7X2 142 aa8.39□□□□□ -1.07
NKRF-204ENST00000542113 GRPEL1Q9HAV7 217 aa8.39□□□□□ -1.07
NKRF-204ENST00000542113 TTC22Q5TAA0 569 aa8.39□□□□□ -1.07
NKRF-204ENST00000542113 CLEC17AQ6ZS10 378 aa8.39□□□□□ -1.07
NKRF-204ENST00000542113 C8orf58Q8NAV2 365 aa8.39□□□□□ -1.07
NKRF-204ENST00000542113 GZF1Q9H116 711 aaPredicted RBP8.39□□□□□ -1.07
NKRF-204ENST00000542113 ANO8Q9HCE9 1232 aaPredicted RBP8.39□□□□□ -1.07
NKRF-204ENST00000542113 REC8O95072 547 aa8.38□□□□□ -1.07
NKRF-204ENST00000542113 SIRT2Q8IXJ6 389 aa8.38□□□□□ -1.07
NKRF-204ENST00000542113 ANP32BQ92688 251 aaKnown RBP8.38□□□□□ -1.07
NKRF-204ENST00000542113 IBTKQ9P2D0 1353 aaPredicted RBP8.38□□□□□ -1.07
NKRF-204ENST00000542113 ELL2O00472 640 aaPredicted RBP8.38□□□□□ -1.07
NKRF-204ENST00000542113 ST18O60284 1047 aa8.38□□□□□ -1.07
NKRF-204ENST00000542113 CWC22Q9HCG8 908 aaKnown RBP8.38□□□□□ -1.07
NKRF-204ENST00000542113 METP08581 1390 aa8.38□□□□□ -1.07
NKRF-204ENST00000542113 CHL1O00533 1208 aa8.38□□□□□ -1.07
NKRF-204ENST00000542113 PLEKHM2Q8IWE5 1019 aa8.38□□□□□ -1.07
NKRF-204ENST00000542113 KIF2CQ99661 725 aa8.38□□□□□ -1.07
NKRF-204ENST00000542113 DLG5Q8TDM6 1919 aa8.37□□□□□ -1.07
NKRF-204ENST00000542113 ARHGEF10O15013 1369 aa8.37□□□□□ -1.07
NKRF-204ENST00000542113 TXNDC2Q86VQ3 553 aa8.37□□□□□ -1.07
NKRF-204ENST00000542113 TRIM44Q96DX7 344 aaPredicted RBP8.37□□□□□ -1.07
NKRF-204ENST00000542113 OVOS2A0A0J9YW53 1432 aa8.37□□□□□ -1.07
NKRF-204ENST00000542113 OVOS2Q6IE36 1432 aa8.37□□□□□ -1.07
NKRF-204ENST00000542113 CLCN1P35523 988 aa8.37□□□□□ -1.07
NKRF-204ENST00000542113 RRS1Q15050 365 aaKnown RBP8.37□□□□□ -1.07
NKRF-204ENST00000542113 ATP10DQ9P241 1426 aa8.37□□□□□ -1.07
NKRF-204ENST00000542113 TNRQ92752 1358 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms