RNA–Protein interactions for RNA: ENST00000540898.1

FOXO3-203, Transcript of forkhead box O3, humanhuman

TSL 1 (best) BASIC

Gene FOXO3, Length 2,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXO3-203ENST00000540898 MAPK8IP3Q9UPT6 1336 aa13.31□□□□□ -0.28
FOXO3-203ENST00000540898 FAM83GA6ND36 823 aa13.3□□□□□ -0.28
FOXO3-203ENST00000540898 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.3□□□□□ -0.28
FOXO3-203ENST00000540898 PHF8Q9UPP1 1060 aa13.3□□□□□ -0.28
FOXO3-203ENST00000540898 CDK12Q9NYV4 1490 aaPredicted RBP13.3□□□□□ -0.28
FOXO3-203ENST00000540898 AATKQ6ZMQ8 1374 aa13.3□□□□□ -0.28
FOXO3-203ENST00000540898 FOXO3O43524 673 aa13.3□□□□□ -0.28
FOXO3-203ENST00000540898 DCTN1Q14203 1278 aa13.3□□□□□ -0.28
FOXO3-203ENST00000540898 PROSER2Q86WR7 435 aaPredicted RBP13.3□□□□□ -0.28
FOXO3-203ENST00000540898 RTN4Q9NQC3 1192 aaKnown RBP13.3□□□□□ -0.28
FOXO3-203ENST00000540898 STRCP1A6NGW2 1772 aa13.29□□□□□ -0.28
FOXO3-203ENST00000540898 ABTB2Q8N961 1025 aa13.29□□□□□ -0.28
FOXO3-203ENST00000540898 ADGRL3Q9HAR2 1447 aa13.29□□□□□ -0.28
FOXO3-203ENST00000540898 SULT6B1Q6IMI4 303 aa13.28□□□□□ -0.28
FOXO3-203ENST00000540898 MARF1Q9Y4F3 1742 aaKnown RBP13.28□□□□□ -0.28
FOXO3-203ENST00000540898 ZBTB7CA1YPR0 619 aa13.27□□□□□ -0.28
FOXO3-203ENST00000540898 FCHSD2O94868 740 aa13.27□□□□□ -0.28
FOXO3-203ENST00000540898 LAS1LQ9Y4W2 734 aaKnown RBP13.27□□□□□ -0.28
FOXO3-203ENST00000540898 LTV1Q96GA3 475 aaPredicted RBP13.27□□□□□ -0.29
FOXO3-203ENST00000540898 EXOSC9Q06265 439 aaKnown RBP13.27□□□□□ -0.29
FOXO3-203ENST00000540898 PANK1Q8TE04 598 aa13.27□□□□□ -0.29
FOXO3-203ENST00000540898 FRAT1Q92837 279 aaPredicted RBP13.27□□□□□ -0.29
FOXO3-203ENST00000540898 USP31Q70CQ4 1352 aa13.26□□□□□ -0.29
FOXO3-203ENST00000540898 ANKARQ7Z5J8 1434 aa13.26□□□□□ -0.29
FOXO3-203ENST00000540898 CCDC27Q2M243 656 aa13.26□□□□□ -0.29
FOXO3-203ENST00000540898 WDR63Q8IWG1 891 aa13.26□□□□□ -0.29
FOXO3-203ENST00000540898 LMOD2Q6P5Q4 547 aa13.26□□□□□ -0.29
FOXO3-203ENST00000540898 TTC21AQ8NDW8 1320 aa13.25□□□□□ -0.29
FOXO3-203ENST00000540898 RARSP54136 660 aaKnown RBP13.25□□□□□ -0.29
FOXO3-203ENST00000540898 PSME1Q06323 249 aa13.25□□□□□ -0.29
FOXO3-203ENST00000540898 RLBP1P12271 317 aa13.24□□□□□ -0.29
FOXO3-203ENST00000540898 USHBP1Q8N6Y0 703 aa13.24□□□□□ -0.29
FOXO3-203ENST00000540898 TMEM94Q12767 1356 aa13.24□□□□□ -0.29
FOXO3-203ENST00000540898 TCERG1O14776 1098 aaKnown RBP13.24□□□□□ -0.29
FOXO3-203ENST00000540898 NFE2L2Q16236 605 aa13.24□□□□□ -0.29
FOXO3-203ENST00000540898 CLUAP1Q96AJ1 413 aa13.24□□□□□ -0.29
FOXO3-203ENST00000540898 DLG5Q8TDM6 1919 aa13.23□□□□□ -0.29
FOXO3-203ENST00000540898 ELL2O00472 640 aaPredicted RBP13.23□□□□□ -0.29
FOXO3-203ENST00000540898 AMPHP49418 695 aa13.23□□□□□ -0.29
FOXO3-203ENST00000540898 NWD1Q149M9 1564 aa13.22□□□□□ -0.29
FOXO3-203ENST00000540898 RTL5Q5HYW3 569 aaPredicted RBP13.22□□□□□ -0.29
FOXO3-203ENST00000540898 MCM10Q7L590 875 aa13.22□□□□□ -0.29
FOXO3-203ENST00000540898 NGEFQ8N5V2 710 aa13.22□□□□□ -0.29
FOXO3-203ENST00000540898 EYA1Q99502 592 aa13.22□□□□□ -0.29
FOXO3-203ENST00000540898 COG6Q9Y2V7 657 aa13.22□□□□□ -0.29
FOXO3-203ENST00000540898 KRT24Q2M2I5 525 aa13.21□□□□□ -0.29
FOXO3-203ENST00000540898 TSPYL6Q8N831 410 aa13.21□□□□□ -0.29
FOXO3-203ENST00000540898 LMTK3Q96Q04 1460 aa13.2□□□□□ -0.3
FOXO3-203ENST00000540898 HOXC9P31274 260 aa13.2□□□□□ -0.3
FOXO3-203ENST00000540898 SSH1Q8WYL5 1049 aa13.2□□□□□ -0.3
FOXO3-203ENST00000540898 MYH16Q9H6N6 1097 aa13.2□□□□□ -0.3
FOXO3-203ENST00000540898 MIS18AQ9NYP9 233 aa13.2□□□□□ -0.3
FOXO3-203ENST00000540898 FLT4P35916 1363 aa13.19□□□□□ -0.3
FOXO3-203ENST00000540898 RGPD1P0DJD0 1748 aa13.19□□□□□ -0.3
FOXO3-203ENST00000540898 ZNF335Q9H4Z2 1342 aaPredicted RBP13.19□□□□□ -0.3
FOXO3-203ENST00000540898 C1orf167Q5SNV9 1468 aa13.19□□□□□ -0.3
FOXO3-203ENST00000540898 SBNO1A3KN83 1393 aa13.19□□□□□ -0.3
FOXO3-203ENST00000540898 CANXP27824 592 aaKnown RBP13.19□□□□□ -0.3
FOXO3-203ENST00000540898 C19orf44Q9H6X5 657 aa13.19□□□□□ -0.3
FOXO3-203ENST00000540898 STRCQ7RTU9 1775 aa13.18□□□□□ -0.3
FOXO3-203ENST00000540898 MTHFSDQ2M296 383 aaKnown RBP13.18□□□□□ -0.3
FOXO3-203ENST00000540898 CABLES1Q8TDN4 633 aa13.18□□□□□ -0.3
FOXO3-203ENST00000540898 LRRC59Q96AG4 307 aaKnown RBP13.18□□□□□ -0.3
FOXO3-203ENST00000540898 MBIPQ9NS73 344 aa13.18□□□□□ -0.3
FOXO3-203ENST00000540898 NEFMP07197 916 aa13.17□□□□□ -0.3
FOXO3-203ENST00000540898 KRT28Q7Z3Y7 464 aa13.17□□□□□ -0.3
FOXO3-203ENST00000540898 LTN1O94822 1766 aa13.16□□□□□ -0.3
FOXO3-203ENST00000540898 SMC4Q9NTJ3 1288 aa13.16□□□□□ -0.3
FOXO3-203ENST00000540898 C8orf58Q8NAV2 365 aa13.16□□□□□ -0.3
FOXO3-203ENST00000540898 MST1RQ04912 1400 aa13.15□□□□□ -0.3
FOXO3-203ENST00000540898 PNNQ9H307 717 aaKnown RBP13.15□□□□□ -0.3
FOXO3-203ENST00000540898 AXIN2Q9Y2T1 843 aa13.15□□□□□ -0.3
FOXO3-203ENST00000540898 NFAT5O94916 1531 aa13.15□□□□□ -0.3
FOXO3-203ENST00000540898 ATF3P18847 181 aa13.15□□□□□ -0.3
FOXO3-203ENST00000540898 RGPD2P0DJD1 1756 aa13.15□□□□□ -0.31
FOXO3-203ENST00000540898 GCP02774 474 aa13.14□□□□□ -0.31
FOXO3-203ENST00000540898 ZC3H6P61129 1189 aaKnown RBP13.14□□□□□ -0.31
FOXO3-203ENST00000540898 NBPF6Q5VWK0 638 aa13.14□□□□□ -0.31
FOXO3-203ENST00000540898 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.14□□□□□ -0.31
FOXO3-203ENST00000540898 NBPF4Q96M43 638 aa13.14□□□□□ -0.31
FOXO3-203ENST00000540898 IGSF1Q8N6C5 1336 aa13.14□□□□□ -0.31
FOXO3-203ENST00000540898 IGHDP01880 384 aa13.14□□□□□ -0.31
FOXO3-203ENST00000540898 XIRP1Q702N8 1843 aaKnown RBP13.13□□□□□ -0.31
FOXO3-203ENST00000540898 ZNF853P0CG23 659 aa13.13□□□□□ -0.31
FOXO3-203ENST00000540898 IPO9Q96P70 1041 aaKnown RBP13.13□□□□□ -0.31
FOXO3-203ENST00000540898 NOB1Q9ULX3 412 aaKnown RBP13.13□□□□□ -0.31
FOXO3-203ENST00000540898 IL16Q14005 1332 aa13.13□□□□□ -0.31
FOXO3-203ENST00000540898 TRIM27P14373 513 aa13.13□□□□□ -0.31
FOXO3-203ENST00000540898 NCBP3Q53F19 620 aaKnown RBP13.13□□□□□ -0.31
FOXO3-203ENST00000540898 ARHGEF10O15013 1369 aa13.12□□□□□ -0.31
FOXO3-203ENST00000540898 KDM2BQ8NHM5 1336 aa13.12□□□□□ -0.31
FOXO3-203ENST00000540898 TRPM3Q9HCF6 1732 aaPredicted RBP13.12□□□□□ -0.31
FOXO3-203ENST00000540898 KDRP35968 1356 aa13.11□□□□□ -0.31
FOXO3-203ENST00000540898 VAMP4O75379 141 aa13.11□□□□□ -0.31
FOXO3-203ENST00000540898 ZBTB47Q9UFB7 747 aaPredicted RBP13.11□□□□□ -0.31
FOXO3-203ENST00000540898 PCDHB15Q9Y5E8 787 aa13.11□□□□□ -0.31
FOXO3-203ENST00000540898 IP6K1Q92551 441 aa13.1□□□□□ -0.31
FOXO3-203ENST00000540898 USP54Q70EL1 1684 aa13.1□□□□□ -0.31
FOXO3-203ENST00000540898 CFAP44Q96MT7 982 aa13.1□□□□□ -0.31
FOXO3-203ENST00000540898 IFT57Q9NWB7 429 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms