RNA–Protein interactions for RNA: ENST00000540367.5

CPT1A-206, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-206ENST00000540367 NEO1Q92859 1461 aa13.96□□□□□ -0.17
CPT1A-206ENST00000540367 PIK3R4Q99570 1358 aa13.96□□□□□ -0.17
CPT1A-206ENST00000540367 TBC1D9Q6ZT07 1266 aa13.96□□□□□ -0.17
CPT1A-206ENST00000540367 LRRC7Q96NW7 1537 aa13.96□□□□□ -0.17
CPT1A-206ENST00000540367 RICTORQ6R327 1708 aa13.96□□□□□ -0.17
CPT1A-206ENST00000540367 PTCH1Q13635 1447 aa13.96□□□□□ -0.18
CPT1A-206ENST00000540367 CCDC173Q0VFZ6 552 aa13.96□□□□□ -0.18
CPT1A-206ENST00000540367 ANKRD45Q5TZF3 282 aa13.96□□□□□ -0.18
CPT1A-206ENST00000540367 CHMP4BQ9H444 224 aaKnown RBP13.96□□□□□ -0.18
CPT1A-206ENST00000540367 PNPLA6Q8IY17 1366 aa13.95□□□□□ -0.18
CPT1A-206ENST00000540367 GOLGA6L22H0YM25 854 aa13.95□□□□□ -0.18
CPT1A-206ENST00000540367 ARHGAP31Q2M1Z3 1444 aa13.95□□□□□ -0.18
CPT1A-206ENST00000540367 ZBTB7BO15156 539 aaPredicted RBP13.95□□□□□ -0.18
CPT1A-206ENST00000540367 DIAPH1O60610 1272 aaKnown RBP13.95□□□□□ -0.18
CPT1A-206ENST00000540367 PPP1R9BQ96SB3 815 aa13.95□□□□□ -0.18
CPT1A-206ENST00000540367 CLTCQ00610 1675 aaKnown RBP13.94□□□□□ -0.18
CPT1A-206ENST00000540367 TPM2P07951 284 aa13.94□□□□□ -0.18
CPT1A-206ENST00000540367 SSFA2P28290 1259 aa13.94□□□□□ -0.18
CPT1A-206ENST00000540367 FOXD4L1Q9NU39 408 aa13.94□□□□□ -0.18
CPT1A-206ENST00000540367 FYB1O15117 783 aa13.93□□□□□ -0.18
CPT1A-206ENST00000540367 VGFO15240 615 aaPredicted RBP13.93□□□□□ -0.18
CPT1A-206ENST00000540367 KLHL40Q2TBA0 621 aa13.93□□□□□ -0.18
CPT1A-206ENST00000540367 GAS2L2Q8NHY3 880 aa13.93□□□□□ -0.18
CPT1A-206ENST00000540367 ZFYVE9O95405 1425 aa13.93□□□□□ -0.18
CPT1A-206ENST00000540367 CD163L1Q9NR16 1453 aa13.93□□□□□ -0.18
CPT1A-206ENST00000540367 ARHGAP45Q92619 1136 aa13.93□□□□□ -0.18
CPT1A-206ENST00000540367 RBM42Q9BTD8 480 aaKnown RBP13.93□□□□□ -0.18
CPT1A-206ENST00000540367 ATAD2Q6PL18 1390 aa13.93□□□□□ -0.18
CPT1A-206ENST00000540367 KIF20BQ96Q89 1820 aa13.93□□□□□ -0.18
CPT1A-206ENST00000540367 NASPP49321 788 aaPredicted RBP13.92□□□□□ -0.18
CPT1A-206ENST00000540367 FAM135BQ49AJ0 1406 aa13.92□□□□□ -0.18
CPT1A-206ENST00000540367 CDC45O75419 566 aa13.92□□□□□ -0.18
CPT1A-206ENST00000540367 TERF2IPQ9NYB0 399 aa13.92□□□□□ -0.18
CPT1A-206ENST00000540367 FCHSD2O94868 740 aa13.91□□□□□ -0.18
CPT1A-206ENST00000540367 BAG4O95429 457 aaKnown RBP13.91□□□□□ -0.18
CPT1A-206ENST00000540367 MRPL50Q8N5N7 158 aaKnown RBP13.91□□□□□ -0.18
CPT1A-206ENST00000540367 C1orf115Q9H7X2 142 aa13.91□□□□□ -0.18
CPT1A-206ENST00000540367 ZSCAN30Q86W11 494 aa13.9□□□□□ -0.18
CPT1A-206ENST00000540367 DDX49Q9Y6V7 483 aaKnown RBP13.9□□□□□ -0.18
CPT1A-206ENST00000540367 ABCC4O15439 1325 aa13.9□□□□□ -0.18
CPT1A-206ENST00000540367 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.9□□□□□ -0.18
CPT1A-206ENST00000540367 SIRT2Q8IXJ6 389 aa13.9□□□□□ -0.18
CPT1A-206ENST00000540367 ANP32BQ92688 251 aaKnown RBP13.9□□□□□ -0.18
CPT1A-206ENST00000540367 PTPRMP28827 1452 aa13.9□□□□□ -0.18
CPT1A-206ENST00000540367 VAMP4O75379 141 aa13.89□□□□□ -0.19
CPT1A-206ENST00000540367 PRAM1Q96QH2 718 aa13.89□□□□□ -0.19
CPT1A-206ENST00000540367 MYO5BQ9ULV0 1848 aa13.89□□□□□ -0.19
CPT1A-206ENST00000540367 PLEKHG5O94827 1062 aa13.89□□□□□ -0.19
CPT1A-206ENST00000540367 VSIG10Q8N0Z9 540 aa13.89□□□□□ -0.19
CPT1A-206ENST00000540367 THUMPD2Q9BTF0 503 aaKnown RBP13.89□□□□□ -0.19
CPT1A-206ENST00000540367 ZNF445P59923 1031 aa13.88□□□□□ -0.19
CPT1A-206ENST00000540367 RABEP1Q15276 862 aa13.88□□□□□ -0.19
CPT1A-206ENST00000540367 CFAP44Q96MT7 982 aa13.88□□□□□ -0.19
CPT1A-206ENST00000540367 AK9Q5TCS8 1911 aa13.88□□□□□ -0.19
CPT1A-206ENST00000540367 PRKAR2BP31323 418 aa13.88□□□□□ -0.19
CPT1A-206ENST00000540367 GSPT1P15170 499 aaKnown RBP13.87□□□□□ -0.19
CPT1A-206ENST00000540367 CALD1Q05682 793 aaKnown RBP13.87□□□□□ -0.19
CPT1A-206ENST00000540367 KIAA1211Q6ZU35 1233 aa13.87□□□□□ -0.19
CPT1A-206ENST00000540367 NUCB2P80303 420 aa13.87□□□□□ -0.19
CPT1A-206ENST00000540367 KNDC1Q76NI1 1749 aa13.87□□□□□ -0.19
CPT1A-206ENST00000540367 ELL2O00472 640 aaPredicted RBP13.86□□□□□ -0.19
CPT1A-206ENST00000540367 CYP2E1P05181 493 aaPredicted RBP13.86□□□□□ -0.19
CPT1A-206ENST00000540367 NFE2L2Q16236 605 aa13.86□□□□□ -0.19
CPT1A-206ENST00000540367 OFD1O75665 1012 aa13.86□□□□□ -0.19
CPT1A-206ENST00000540367 GNAI1P63096 354 aa13.86□□□□□ -0.19
CPT1A-206ENST00000540367 HDGFL2Q7Z4V5 671 aaPredicted RBP13.86□□□□□ -0.19
CPT1A-206ENST00000540367 IFT57Q9NWB7 429 aa13.86□□□□□ -0.19
CPT1A-206ENST00000540367 STAG3Q9UJ98 1225 aa13.86□□□□□ -0.19
CPT1A-206ENST00000540367 HMOX1P09601 288 aa13.85□□□□□ -0.19
CPT1A-206ENST00000540367 MSNP26038 577 aaKnown RBP13.85□□□□□ -0.19
CPT1A-206ENST00000540367 PLEKHM2Q8IWE5 1019 aa13.85□□□□□ -0.19
CPT1A-206ENST00000540367 TSPYL6Q8N831 410 aa13.85□□□□□ -0.19
CPT1A-206ENST00000540367 ZMYND15Q9H091 742 aa13.85□□□□□ -0.19
CPT1A-206ENST00000540367 HS1BP3Q53T59 392 aa13.85□□□□□ -0.19
CPT1A-206ENST00000540367 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.85□□□□□ -0.19
CPT1A-206ENST00000540367 CABP1Q9NZU7 370 aa13.85□□□□□ -0.19
CPT1A-206ENST00000540367 KIF24Q5T7B8 1368 aa13.84□□□□□ -0.19
CPT1A-206ENST00000540367 MCTP1Q6DN14 999 aa13.84□□□□□ -0.19
CPT1A-206ENST00000540367 WAPLQ7Z5K2 1190 aa13.84□□□□□ -0.19
CPT1A-206ENST00000540367 ZNF853P0CG23 659 aa13.84□□□□□ -0.19
CPT1A-206ENST00000540367 TERF1P54274 439 aa13.84□□□□□ -0.19
CPT1A-206ENST00000540367 ZSCAN23Q3MJ62 389 aa13.84□□□□□ -0.19
CPT1A-206ENST00000540367 TTC22Q5TAA0 569 aa13.84□□□□□ -0.19
CPT1A-206ENST00000540367 API5Q9BZZ5 524 aaKnown RBP13.84□□□□□ -0.19
CPT1A-206ENST00000540367 PDCL3Q9H2J4 239 aa13.84□□□□□ -0.19
CPT1A-206ENST00000540367 LMBRD1Q9NUN5 540 aa13.84□□□□□ -0.19
CPT1A-206ENST00000540367 ZRANB1Q9UGI0 708 aa13.83□□□□□ -0.2
CPT1A-206ENST00000540367 NCKAP5LQ9HCH0 1330 aa13.83□□□□□ -0.2
CPT1A-206ENST00000540367 YTHDC2Q9H6S0 1430 aaKnown RBP13.83□□□□□ -0.2
CPT1A-206ENST00000540367 CAVIN1Q6NZI2 390 aaKnown RBP13.83□□□□□ -0.2
CPT1A-206ENST00000540367 PHACTR3Q96KR7 559 aa13.83□□□□□ -0.2
CPT1A-206ENST00000540367 USP26Q9BXU7 913 aa13.83□□□□□ -0.2
CPT1A-206ENST00000540367 DCTPP1Q9H773 170 aa13.83□□□□□ -0.2
CPT1A-206ENST00000540367 MBIPQ9NS73 344 aa13.83□□□□□ -0.2
CPT1A-206ENST00000540367 TWISTNBQ3B726 338 aaPredicted RBP13.82□□□□□ -0.2
CPT1A-206ENST00000540367 CWC22Q9HCG8 908 aaKnown RBP13.82□□□□□ -0.2
CPT1A-206ENST00000540367 POLKQ9UBT6 870 aa13.82□□□□□ -0.2
CPT1A-206ENST00000540367 ARHGEF40Q8TER5 1519 aa13.82□□□□□ -0.2
CPT1A-206ENST00000540367 MAP2P11137 1827 aaKnown RBP13.82□□□□□ -0.2
CPT1A-206ENST00000540367 PDLIM2Q96JY6 352 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms