RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 B4GALNT3Q6L9W6 998 aa22.23■■□□□ 1.15
LTBR-207ENST00000539925 KDM4FA0A1W2PPD8 638 aa22.22■■□□□ 1.15
LTBR-207ENST00000539925 C1orf167Q5SNV9 1468 aa22.21■■□□□ 1.15
LTBR-207ENST00000539925 PDE3AQ14432 1141 aa22.21■■□□□ 1.15
LTBR-207ENST00000539925 EXOC6Q8TAG9 804 aa22.2■■□□□ 1.15
LTBR-207ENST00000539925 ZNF428Q96B54 188 aa22.2■■□□□ 1.15
LTBR-207ENST00000539925 RBM33Q96EV2 1170 aaKnown RBP22.2■■□□□ 1.15
LTBR-207ENST00000539925 PEAK1Q9H792 1746 aa22.2■■□□□ 1.14
LTBR-207ENST00000539925 LMTK3Q96Q04 1460 aa22.2■■□□□ 1.14
LTBR-207ENST00000539925 TMEM94Q12767 1356 aa22.2■■□□□ 1.14
LTBR-207ENST00000539925 HSP90AB2PQ58FF8 381 aa22.2■■□□□ 1.14
LTBR-207ENST00000539925 CADPS2Q86UW7 1296 aa22.2■■□□□ 1.14
LTBR-207ENST00000539925 FANCIQ9NVI1 1328 aa22.19■■□□□ 1.14
LTBR-207ENST00000539925 MST1RQ04912 1400 aa22.18■■□□□ 1.14
LTBR-207ENST00000539925 PLIN1O60240 522 aa22.18■■□□□ 1.14
LTBR-207ENST00000539925 RARSP54136 660 aaKnown RBP22.18■■□□□ 1.14
LTBR-207ENST00000539925 RGPD1P0DJD0 1748 aa22.18■■□□□ 1.14
LTBR-207ENST00000539925 AAMPQ13685 434 aa22.17■■□□□ 1.14
LTBR-207ENST00000539925 SULT6B1Q6IMI4 303 aa22.17■■□□□ 1.14
LTBR-207ENST00000539925 PHACTR3Q96KR7 559 aa22.17■■□□□ 1.14
LTBR-207ENST00000539925 GNAI1P63096 354 aa22.17■■□□□ 1.14
LTBR-207ENST00000539925 IFT57Q9NWB7 429 aa22.17■■□□□ 1.14
LTBR-207ENST00000539925 KDRP35968 1356 aa22.16■■□□□ 1.14
LTBR-207ENST00000539925 MS4A1P11836 297 aa22.16■■□□□ 1.14
LTBR-207ENST00000539925 MSH6P52701 1360 aa22.16■■□□□ 1.14
LTBR-207ENST00000539925 SOX12O15370 315 aa22.15■■□□□ 1.14
LTBR-207ENST00000539925 HOXC9P31274 260 aa22.15■■□□□ 1.14
LTBR-207ENST00000539925 HSPA2P54652 639 aa22.15■■□□□ 1.14
LTBR-207ENST00000539925 CRBNQ96SW2 442 aa22.15■■□□□ 1.14
LTBR-207ENST00000539925 MARF1Q9Y4F3 1742 aaKnown RBP22.15■■□□□ 1.14
LTBR-207ENST00000539925 IGSF1Q8N6C5 1336 aa22.15■■□□□ 1.14
LTBR-207ENST00000539925 ORAI2Q96SN7 254 aa22.14■■□□□ 1.14
LTBR-207ENST00000539925 CANXP27824 592 aaKnown RBP22.14■■□□□ 1.13
LTBR-207ENST00000539925 FOXO3O43524 673 aa22.13■■□□□ 1.13
LTBR-207ENST00000539925 BCAR3O75815 825 aa22.13■■□□□ 1.13
LTBR-207ENST00000539925 KRT28Q7Z3Y7 464 aa22.12■■□□□ 1.13
LTBR-207ENST00000539925 IP6K1Q92551 441 aa22.12■■□□□ 1.13
LTBR-207ENST00000539925 NFAT5O94916 1531 aa22.12■■□□□ 1.13
LTBR-207ENST00000539925 PHRF1Q9P1Y6 1649 aaKnown RBP22.11■■□□□ 1.13
LTBR-207ENST00000539925 HAP1P54257 671 aaPredicted RBP22.11■■□□□ 1.13
LTBR-207ENST00000539925 GAS2L2Q8NHY3 880 aa22.11■■□□□ 1.13
LTBR-207ENST00000539925 SLIT3O75094 1523 aa22.1■■□□□ 1.13
LTBR-207ENST00000539925 USP19O94966 1318 aa22.1■■□□□ 1.13
LTBR-207ENST00000539925 EXOSC9Q06265 439 aaKnown RBP22.1■■□□□ 1.13
LTBR-207ENST00000539925 NUTM2GQ5VZR2 741 aa22.1■■□□□ 1.13
LTBR-207ENST00000539925 CFAP44Q96MT7 982 aa22.1■■□□□ 1.13
LTBR-207ENST00000539925 ZNF853P0CG23 659 aa22.09■■□□□ 1.13
LTBR-207ENST00000539925 ALDH1L2Q3SY69 923 aa22.09■■□□□ 1.13
LTBR-207ENST00000539925 TSR2Q969E8 191 aaKnown RBP22.09■■□□□ 1.13
LTBR-207ENST00000539925 EYA1Q99502 592 aa22.09■■□□□ 1.13
LTBR-207ENST00000539925 STRCP1A6NGW2 1772 aa22.09■■□□□ 1.13
LTBR-207ENST00000539925 NPHP3Q7Z494 1330 aa22.08■■□□□ 1.13
LTBR-207ENST00000539925 HTATSF1O43719 755 aaKnown RBP22.08■■□□□ 1.13
LTBR-207ENST00000539925 AEBP1Q8IUX7 1158 aa22.08■■□□□ 1.13
LTBR-207ENST00000539925 TRPM3Q9HCF6 1732 aaPredicted RBP22.08■■□□□ 1.12
LTBR-207ENST00000539925 C20orf194Q5TEA3 1177 aa22.07■■□□□ 1.12
LTBR-207ENST00000539925 STRCQ7RTU9 1775 aa22.06■■□□□ 1.12
LTBR-207ENST00000539925 TSHZ2Q9NRE2 1034 aa22.06■■□□□ 1.12
LTBR-207ENST00000539925 KIF16BQ96L93 1317 aa22.05■■□□□ 1.12
LTBR-207ENST00000539925 IPO8O15397 1037 aaKnown RBP22.05■■□□□ 1.12
LTBR-207ENST00000539925 GCP02774 474 aa22.05■■□□□ 1.12
LTBR-207ENST00000539925 BRPF1P55201 1214 aaPredicted RBP22.05■■□□□ 1.12
LTBR-207ENST00000539925 ZKSCAN2Q63HK3 967 aa22.04■■□□□ 1.12
LTBR-207ENST00000539925 RTF1Q92541 710 aaKnown RBP22.04■■□□□ 1.12
LTBR-207ENST00000539925 SMC4Q9NTJ3 1288 aa22.04■■□□□ 1.12
LTBR-207ENST00000539925 ARHGEF25Q86VW2 580 aa22.03■■□□□ 1.12
LTBR-207ENST00000539925 FRAT1Q92837 279 aaPredicted RBP22.03■■□□□ 1.12
LTBR-207ENST00000539925 DLG5Q8TDM6 1919 aa22.03■■□□□ 1.12
LTBR-207ENST00000539925 LTN1O94822 1766 aa22.02■■□□□ 1.12
LTBR-207ENST00000539925 LAS1LQ9Y4W2 734 aaKnown RBP22.01■■□□□ 1.11
LTBR-207ENST00000539925 CENPQQ7L2Z9 268 aaPredicted RBP22.01■■□□□ 1.11
LTBR-207ENST00000539925 MBIPQ9NS73 344 aa22■■□□□ 1.11
LTBR-207ENST00000539925 ALS2Q96Q42 1657 aa21.99■■□□□ 1.11
LTBR-207ENST00000539925 LMOD2Q6P5Q4 547 aa21.99■■□□□ 1.11
LTBR-207ENST00000539925 SSH1Q8WYL5 1049 aa21.98■■□□□ 1.11
LTBR-207ENST00000539925 CHL1O00533 1208 aa21.98■■□□□ 1.11
LTBR-207ENST00000539925 XPCQ01831 940 aaPredicted RBP21.98■■□□□ 1.11
LTBR-207ENST00000539925 MTHFSDQ2M296 383 aaKnown RBP21.98■■□□□ 1.11
LTBR-207ENST00000539925 FTSJ3Q8IY81 847 aaKnown RBP21.98■■□□□ 1.11
LTBR-207ENST00000539925 THUMPD2Q9BTF0 503 aaKnown RBP21.98■■□□□ 1.11
LTBR-207ENST00000539925 KIAA0232Q92628 1395 aa21.97■■□□□ 1.11
LTBR-207ENST00000539925 TNS3Q68CZ2 1445 aa21.97■■□□□ 1.11
LTBR-207ENST00000539925 DZIP1LQ8IYY4 767 aaKnown RBP21.97■■□□□ 1.11
LTBR-207ENST00000539925 ARHGAP45Q92619 1136 aa21.97■■□□□ 1.11
LTBR-207ENST00000539925 BABAM1Q9NWV8 329 aa21.97■■□□□ 1.11
LTBR-207ENST00000539925 ABCC6O95255 1503 aa21.96■■□□□ 1.11
LTBR-207ENST00000539925 VAMP4O75379 141 aa21.96■■□□□ 1.11
LTBR-207ENST00000539925 ATF7IPQ6VMQ6 1270 aa21.96■■□□□ 1.11
LTBR-207ENST00000539925 CLUAP1Q96AJ1 413 aa21.95■■□□□ 1.1
LTBR-207ENST00000539925 BCL2L13Q9BXK5 485 aa21.95■■□□□ 1.1
LTBR-207ENST00000539925 CHMP4BQ9H444 224 aaKnown RBP21.95■■□□□ 1.1
LTBR-207ENST00000539925 FAM83GA6ND36 823 aa21.95■■□□□ 1.1
LTBR-207ENST00000539925 GNAT3A8MTJ3 354 aa21.95■■□□□ 1.1
LTBR-207ENST00000539925 NCAPD2Q15021 1401 aa21.94■■□□□ 1.1
LTBR-207ENST00000539925 TCERG1O14776 1098 aaKnown RBP21.94■■□□□ 1.1
LTBR-207ENST00000539925 TWISTNBQ3B726 338 aaPredicted RBP21.94■■□□□ 1.1
LTBR-207ENST00000539925 PANK1Q8TE04 598 aa21.94■■□□□ 1.1
LTBR-207ENST00000539925 LTV1Q96GA3 475 aaPredicted RBP21.94■■□□□ 1.1
LTBR-207ENST00000539925 COG6Q9Y2V7 657 aa21.94■■□□□ 1.1
LTBR-207ENST00000539925 KDM2BQ8NHM5 1336 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms