RNA–Protein interactions for RNA: ENST00000539643.1

SLC38A10-203, Transcript of solute carrier family 38 member 10, humanhuman

TSL 1 (best)

Gene SLC38A10, Length 1,988 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A10-203ENST00000539643 IL16Q14005 1332 aa23.34■■□□□ 1.33
SLC38A10-203ENST00000539643 PIK3C2AO00443 1686 aa23.33■■□□□ 1.32
SLC38A10-203ENST00000539643 PRKAR2BP31323 418 aa23.32■■□□□ 1.32
SLC38A10-203ENST00000539643 FRAT1Q92837 279 aaPredicted RBP23.32■■□□□ 1.32
SLC38A10-203ENST00000539643 USP54Q70EL1 1684 aa23.32■■□□□ 1.32
SLC38A10-203ENST00000539643 RIPK4P57078 832 aa23.31■■□□□ 1.32
SLC38A10-203ENST00000539643 PANK1Q8TE04 598 aa23.31■■□□□ 1.32
SLC38A10-203ENST00000539643 C19orf44Q9H6X5 657 aa23.31■■□□□ 1.32
SLC38A10-203ENST00000539643 ESCO1Q5FWF5 840 aa23.31■■□□□ 1.32
SLC38A10-203ENST00000539643 PEAK1Q9H792 1746 aa23.3■■□□□ 1.32
SLC38A10-203ENST00000539643 NEFMP07197 916 aa23.29■■□□□ 1.32
SLC38A10-203ENST00000539643 COG6Q9Y2V7 657 aa23.29■■□□□ 1.32
SLC38A10-203ENST00000539643 NPM2Q86SE8 214 aaKnown RBP23.29■■□□□ 1.32
SLC38A10-203ENST00000539643 HMOX1P09601 288 aa23.28■■□□□ 1.32
SLC38A10-203ENST00000539643 STRCP1A6NGW2 1772 aa23.28■■□□□ 1.32
SLC38A10-203ENST00000539643 PAK3O75914 559 aaPredicted RBP23.27■■□□□ 1.32
SLC38A10-203ENST00000539643 CLUAP1Q96AJ1 413 aa23.27■■□□□ 1.32
SLC38A10-203ENST00000539643 CT47B1P0C2W7 299 aaPredicted RBP23.27■■□□□ 1.32
SLC38A10-203ENST00000539643 NFE2L2Q16236 605 aa23.27■■□□□ 1.32
SLC38A10-203ENST00000539643 PHACTR3Q96KR7 559 aa23.27■■□□□ 1.32
SLC38A10-203ENST00000539643 STRCQ7RTU9 1775 aa23.26■■□□□ 1.31
SLC38A10-203ENST00000539643 NCOA3Q9Y6Q9 1424 aa23.26■■□□□ 1.31
SLC38A10-203ENST00000539643 NLRP6P59044 892 aa23.26■■□□□ 1.31
SLC38A10-203ENST00000539643 EIF4A2Q14240 407 aaKnown RBP23.26■■□□□ 1.31
SLC38A10-203ENST00000539643 TMEM94Q12767 1356 aa23.26■■□□□ 1.31
SLC38A10-203ENST00000539643 BCL2L13Q9BXK5 485 aa23.25■■□□□ 1.31
SLC38A10-203ENST00000539643 ZBTB47Q9UFB7 747 aaPredicted RBP23.25■■□□□ 1.31
SLC38A10-203ENST00000539643 MARF1Q9Y4F3 1742 aaKnown RBP23.25■■□□□ 1.31
SLC38A10-203ENST00000539643 RGPD1P0DJD0 1748 aa23.25■■□□□ 1.31
SLC38A10-203ENST00000539643 PSME1Q06323 249 aa23.25■■□□□ 1.31
SLC38A10-203ENST00000539643 ABTB2Q8N961 1025 aa23.25■■□□□ 1.31
SLC38A10-203ENST00000539643 ORAI2Q96SN7 254 aa23.25■■□□□ 1.31
SLC38A10-203ENST00000539643 TSR2Q969E8 191 aaKnown RBP23.24■■□□□ 1.31
SLC38A10-203ENST00000539643 SBNO1A3KN83 1393 aa23.24■■□□□ 1.31
SLC38A10-203ENST00000539643 MAP3K19Q56UN5 1328 aa23.23■■□□□ 1.31
SLC38A10-203ENST00000539643 AAMPQ13685 434 aa23.23■■□□□ 1.31
SLC38A10-203ENST00000539643 FLT4P35916 1363 aa23.22■■□□□ 1.31
SLC38A10-203ENST00000539643 KIF24Q5T7B8 1368 aa23.22■■□□□ 1.31
SLC38A10-203ENST00000539643 SOX12O15370 315 aa23.21■■□□□ 1.31
SLC38A10-203ENST00000539643 IGHDP01880 384 aa23.21■■□□□ 1.31
SLC38A10-203ENST00000539643 HSP90AB2PQ58FF8 381 aa23.21■■□□□ 1.31
SLC38A10-203ENST00000539643 RLBP1P12271 317 aa23.21■■□□□ 1.31
SLC38A10-203ENST00000539643 C1orf167Q5SNV9 1468 aa23.2■■□□□ 1.3
SLC38A10-203ENST00000539643 ATF3P18847 181 aa23.2■■□□□ 1.3
SLC38A10-203ENST00000539643 RGS3P49796 1198 aa23.2■■□□□ 1.3
SLC38A10-203ENST00000539643 EXOSC9Q06265 439 aaKnown RBP23.2■■□□□ 1.3
SLC38A10-203ENST00000539643 TNNQ9UQP3 1299 aa23.2■■□□□ 1.3
SLC38A10-203ENST00000539643 NUTM2GQ5VZR2 741 aa23.2■■□□□ 1.3
SLC38A10-203ENST00000539643 FOXO3O43524 673 aa23.19■■□□□ 1.3
SLC38A10-203ENST00000539643 FAM161AQ3B820 660 aa23.19■■□□□ 1.3
SLC38A10-203ENST00000539643 DCCP43146 1447 aa23.19■■□□□ 1.3
SLC38A10-203ENST00000539643 CALD1Q05682 793 aaKnown RBP23.18■■□□□ 1.3
SLC38A10-203ENST00000539643 ARHGEF10O15013 1369 aa23.17■■□□□ 1.3
SLC38A10-203ENST00000539643 ZKSCAN2Q63HK3 967 aa23.17■■□□□ 1.3
SLC38A10-203ENST00000539643 LMOD3Q0VAK6 560 aa23.16■■□□□ 1.3
SLC38A10-203ENST00000539643 SULT6B1Q6IMI4 303 aa23.16■■□□□ 1.3
SLC38A10-203ENST00000539643 SMC4Q9NTJ3 1288 aa23.16■■□□□ 1.3
SLC38A10-203ENST00000539643 AEBP1Q8IUX7 1158 aa23.15■■□□□ 1.3
SLC38A10-203ENST00000539643 DLG5Q8TDM6 1919 aa23.15■■□□□ 1.3
SLC38A10-203ENST00000539643 MST1RQ04912 1400 aa23.15■■□□□ 1.3
SLC38A10-203ENST00000539643 C8orf34Q49A92 452 aa23.14■■□□□ 1.3
SLC38A10-203ENST00000539643 CADPS2Q86UW7 1296 aa23.14■■□□□ 1.3
SLC38A10-203ENST00000539643 KDRP35968 1356 aa23.14■■□□□ 1.29
SLC38A10-203ENST00000539643 AMPHP49418 695 aa23.13■■□□□ 1.29
SLC38A10-203ENST00000539643 KIF1AQ12756 1690 aa23.13■■□□□ 1.29
SLC38A10-203ENST00000539643 ZNF853P0CG23 659 aa23.12■■□□□ 1.29
SLC38A10-203ENST00000539643 MVPQ14764 893 aaKnown RBP23.12■■□□□ 1.29
SLC38A10-203ENST00000539643 FTSJ3Q8IY81 847 aaKnown RBP23.12■■□□□ 1.29
SLC38A10-203ENST00000539643 DZIP1LQ8IYY4 767 aaKnown RBP23.12■■□□□ 1.29
SLC38A10-203ENST00000539643 MSH6P52701 1360 aa23.12■■□□□ 1.29
SLC38A10-203ENST00000539643 KRT28Q7Z3Y7 464 aa23.12■■□□□ 1.29
SLC38A10-203ENST00000539643 IFT57Q9NWB7 429 aa23.12■■□□□ 1.29
SLC38A10-203ENST00000539643 XPCQ01831 940 aaPredicted RBP23.11■■□□□ 1.29
SLC38A10-203ENST00000539643 SSH1Q8WYL5 1049 aa23.11■■□□□ 1.29
SLC38A10-203ENST00000539643 PCDHB15Q9Y5E8 787 aa23.11■■□□□ 1.29
SLC38A10-203ENST00000539643 IGSF1Q8N6C5 1336 aa23.11■■□□□ 1.29
SLC38A10-203ENST00000539643 RTL1A6NKG5 1358 aa23.11■■□□□ 1.29
SLC38A10-203ENST00000539643 GNAI1P63096 354 aa23.1■■□□□ 1.29
SLC38A10-203ENST00000539643 HOXC9P31274 260 aa23.1■■□□□ 1.29
SLC38A10-203ENST00000539643 ZNF335Q9H4Z2 1342 aaPredicted RBP23.1■■□□□ 1.29
SLC38A10-203ENST00000539643 NFAT5O94916 1531 aa23.1■■□□□ 1.29
SLC38A10-203ENST00000539643 DDRGK1Q96HY6 314 aa23.09■■□□□ 1.29
SLC38A10-203ENST00000539643 XIRP1Q702N8 1843 aaKnown RBP23.09■■□□□ 1.29
SLC38A10-203ENST00000539643 VIRMAQ69YN4 1812 aaKnown RBP23.09■■□□□ 1.29
SLC38A10-203ENST00000539643 ZNF428Q96B54 188 aa23.09■■□□□ 1.29
SLC38A10-203ENST00000539643 KCNH5Q8NCM2 988 aa23.08■■□□□ 1.29
SLC38A10-203ENST00000539643 THUMPD2Q9BTF0 503 aaKnown RBP23.08■■□□□ 1.29
SLC38A10-203ENST00000539643 TRIM27P14373 513 aa23.07■■□□□ 1.28
SLC38A10-203ENST00000539643 CFAP44Q96MT7 982 aa23.07■■□□□ 1.28
SLC38A10-203ENST00000539643 EYA1Q99502 592 aa23.07■■□□□ 1.28
SLC38A10-203ENST00000539643 TRPM3Q9HCF6 1732 aaPredicted RBP23.06■■□□□ 1.28
SLC38A10-203ENST00000539643 ALDH1L2Q3SY69 923 aa23.06■■□□□ 1.28
SLC38A10-203ENST00000539643 ATF7IPQ6VMQ6 1270 aa23.06■■□□□ 1.28
SLC38A10-203ENST00000539643 RWDD1Q9H446 243 aaPredicted RBP23.05■■□□□ 1.28
SLC38A10-203ENST00000539643 PHRF1Q9P1Y6 1649 aaKnown RBP23.05■■□□□ 1.28
SLC38A10-203ENST00000539643 KIF16BQ96L93 1317 aa23.05■■□□□ 1.28
SLC38A10-203ENST00000539643 NOB1Q9ULX3 412 aaKnown RBP23.05■■□□□ 1.28
SLC38A10-203ENST00000539643 LTN1O94822 1766 aa23.04■■□□□ 1.28
SLC38A10-203ENST00000539643 FAM83GA6ND36 823 aa23.03■■□□□ 1.28
SLC38A10-203ENST00000539643 BRPF1P55201 1214 aaPredicted RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms