RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 NFE2L2Q16236 605 aa12.09□□□□□ -0.47
CDH13-204ENST00000539548 CABP1Q9NZU7 370 aa12.09□□□□□ -0.47
CDH13-204ENST00000539548 ALKQ9UM73 1620 aa12.09□□□□□ -0.47
CDH13-204ENST00000539548 MAP2P11137 1827 aaKnown RBP12.09□□□□□ -0.47
CDH13-204ENST00000539548 ANKRD45Q5TZF3 282 aa12.09□□□□□ -0.47
CDH13-204ENST00000539548 KIF2CQ99661 725 aa12.09□□□□□ -0.47
CDH13-204ENST00000539548 POLKQ9UBT6 870 aa12.09□□□□□ -0.47
CDH13-204ENST00000539548 RICTORQ6R327 1708 aa12.08□□□□□ -0.47
CDH13-204ENST00000539548 GNAI1P63096 354 aa12.08□□□□□ -0.48
CDH13-204ENST00000539548 REREQ9P2R6 1566 aa12.08□□□□□ -0.48
CDH13-204ENST00000539548 TNPO1Q92973 898 aaKnown RBP12.08□□□□□ -0.48
CDH13-204ENST00000539548 IFT57Q9NWB7 429 aa12.08□□□□□ -0.48
CDH13-204ENST00000539548 ATP7BP35670 1465 aa12.07□□□□□ -0.48
CDH13-204ENST00000539548 EIF5BO60841 1220 aaKnown RBP12.07□□□□□ -0.48
CDH13-204ENST00000539548 HSP90AB1P08238 724 aaKnown RBP12.07□□□□□ -0.48
CDH13-204ENST00000539548 ZNF853P0CG23 659 aa12.07□□□□□ -0.48
CDH13-204ENST00000539548 PTMSP20962 102 aa12.07□□□□□ -0.48
CDH13-204ENST00000539548 RAB3GAP1Q15042 981 aa12.07□□□□□ -0.48
CDH13-204ENST00000539548 PHACTR3Q96KR7 559 aa12.07□□□□□ -0.48
CDH13-204ENST00000539548 PANK2Q9BZ23 570 aa12.07□□□□□ -0.48
CDH13-204ENST00000539548 SKOR2Q2VWA4 1001 aaPredicted RBP12.06□□□□□ -0.48
CDH13-204ENST00000539548 GBP4Q96PP9 640 aa12.06□□□□□ -0.48
CDH13-204ENST00000539548 ABCC4O15439 1325 aa12.06□□□□□ -0.48
CDH13-204ENST00000539548 SIRT2Q8IXJ6 389 aa12.06□□□□□ -0.48
CDH13-204ENST00000539548 GRPEL1Q9HAV7 217 aa12.06□□□□□ -0.48
CDH13-204ENST00000539548 DLC1Q96QB1 1528 aa12.06□□□□□ -0.48
CDH13-204ENST00000539548 CLCN1P35523 988 aa12.05□□□□□ -0.48
CDH13-204ENST00000539548 TBC1D9Q6ZT07 1266 aa12.05□□□□□ -0.48
CDH13-204ENST00000539548 ARXQ96QS3 562 aa12.05□□□□□ -0.48
CDH13-204ENST00000539548 TSPYL6Q8N831 410 aa12.05□□□□□ -0.48
CDH13-204ENST00000539548 SENP3Q9H4L4 574 aaPredicted RBP12.05□□□□□ -0.48
CDH13-204ENST00000539548 KIF24Q5T7B8 1368 aa12.05□□□□□ -0.48
CDH13-204ENST00000539548 IL13P35225 146 aa12.04□□□□□ -0.48
CDH13-204ENST00000539548 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.04□□□□□ -0.48
CDH13-204ENST00000539548 DLG5Q8TDM6 1919 aa12.04□□□□□ -0.48
CDH13-204ENST00000539548 K7ELQ4 463 aaPredicted RBP12.03□□□□□ -0.48
CDH13-204ENST00000539548 API5Q9BZZ5 524 aaKnown RBP12.03□□□□□ -0.48
CDH13-204ENST00000539548 C1orf115Q9H7X2 142 aa12.03□□□□□ -0.48
CDH13-204ENST00000539548 MBIPQ9NS73 344 aa12.03□□□□□ -0.48
CDH13-204ENST00000539548 YEATS2Q9ULM3 1422 aa12.03□□□□□ -0.48
CDH13-204ENST00000539548 CDC45O75419 566 aa12.03□□□□□ -0.48
CDH13-204ENST00000539548 HMOX1P09601 288 aa12.03□□□□□ -0.48
CDH13-204ENST00000539548 FBLN1P23142 703 aa12.03□□□□□ -0.48
CDH13-204ENST00000539548 CFAP44Q96MT7 982 aa12.03□□□□□ -0.48
CDH13-204ENST00000539548 THUMPD2Q9BTF0 503 aaKnown RBP12.03□□□□□ -0.48
CDH13-204ENST00000539548 CDK12Q9NYV4 1490 aaPredicted RBP12.02□□□□□ -0.48
CDH13-204ENST00000539548 LMOD3Q0VAK6 560 aa12.02□□□□□ -0.48
CDH13-204ENST00000539548 TWISTNBQ3B726 338 aaPredicted RBP12.02□□□□□ -0.48
CDH13-204ENST00000539548 CLEC17AQ6ZS10 378 aa12.02□□□□□ -0.48
CDH13-204ENST00000539548 CD2BP2O95400 341 aaKnown RBP12.02□□□□□ -0.49
CDH13-204ENST00000539548 CPSF1Q10570 1443 aaKnown RBP12.02□□□□□ -0.49
CDH13-204ENST00000539548 AATKQ6ZMQ8 1374 aa12.01□□□□□ -0.49
CDH13-204ENST00000539548 HSP90AA1P07900 732 aaKnown RBP12.01□□□□□ -0.49
CDH13-204ENST00000539548 EDC4Q6P2E9 1401 aaKnown RBP12.01□□□□□ -0.49
CDH13-204ENST00000539548 FBXO31Q5XUX0 539 aaPredicted RBP12.01□□□□□ -0.49
CDH13-204ENST00000539548 C8orf58Q8NAV2 365 aa12.01□□□□□ -0.49
CDH13-204ENST00000539548 DCTPP1Q9H773 170 aa12.01□□□□□ -0.49
CDH13-204ENST00000539548 EMILIN1Q9Y6C2 1016 aa12.01□□□□□ -0.49
CDH13-204ENST00000539548 ELL2O00472 640 aaPredicted RBP12□□□□□ -0.49
CDH13-204ENST00000539548 PLEKHM2Q8IWE5 1019 aa12□□□□□ -0.49
CDH13-204ENST00000539548 SETD1AO15047 1707 aaKnown RBP12□□□□□ -0.49
CDH13-204ENST00000539548 WAPLQ7Z5K2 1190 aa11.99□□□□□ -0.49
CDH13-204ENST00000539548 GAS2L3Q86XJ1 694 aa11.99□□□□□ -0.49
CDH13-204ENST00000539548 RBM42Q9BTD8 480 aaKnown RBP11.99□□□□□ -0.49
CDH13-204ENST00000539548 KNDC1Q76NI1 1749 aa11.99□□□□□ -0.49
CDH13-204ENST00000539548 INTS3Q68E01 1043 aaKnown RBP11.99□□□□□ -0.49
CDH13-204ENST00000539548 GAS2L2Q8NHY3 880 aa11.99□□□□□ -0.49
CDH13-204ENST00000539548 GSPT1P15170 499 aaKnown RBP11.98□□□□□ -0.49
CDH13-204ENST00000539548 RABEP1Q15276 862 aa11.98□□□□□ -0.49
CDH13-204ENST00000539548 STAG3Q9UJ98 1225 aa11.98□□□□□ -0.49
CDH13-204ENST00000539548 RIMS2Q9UQ26 1411 aa11.98□□□□□ -0.49
CDH13-204ENST00000539548 ESPNB1AK53 854 aa11.98□□□□□ -0.49
CDH13-204ENST00000539548 GOLGA6L22H0YM25 854 aa11.98□□□□□ -0.49
CDH13-204ENST00000539548 TTC22Q5TAA0 569 aa11.98□□□□□ -0.49
CDH13-204ENST00000539548 ILDR1Q86SU0 546 aaPredicted RBP11.98□□□□□ -0.49
CDH13-204ENST00000539548 NME9Q86XW9 330 aa11.98□□□□□ -0.49
CDH13-204ENST00000539548 UBE2Q2Q8WVN8 375 aa11.98□□□□□ -0.49
CDH13-204ENST00000539548 FOXD4L1Q9NU39 408 aa11.98□□□□□ -0.49
CDH13-204ENST00000539548 WASLO00401 505 aaPredicted RBP11.97□□□□□ -0.49
CDH13-204ENST00000539548 SSFA2P28290 1259 aa11.97□□□□□ -0.49
CDH13-204ENST00000539548 ANKRD44Q8N8A2 993 aa11.97□□□□□ -0.49
CDH13-204ENST00000539548 RPAP2Q8IXW5 612 aaPredicted RBP11.96□□□□□ -0.49
CDH13-204ENST00000539548 USP26Q9BXU7 913 aa11.96□□□□□ -0.49
CDH13-204ENST00000539548 IBTKQ9P2D0 1353 aaPredicted RBP11.96□□□□□ -0.49
CDH13-204ENST00000539548 A2ML1A8K2U0 1454 aa11.96□□□□□ -0.49
CDH13-204ENST00000539548 MON2Q7Z3U7 1717 aa11.96□□□□□ -0.49
CDH13-204ENST00000539548 HAP1P54257 671 aaPredicted RBP11.96□□□□□ -0.5
CDH13-204ENST00000539548 COG3Q96JB2 828 aa11.96□□□□□ -0.5
CDH13-204ENST00000539548 PPP6R1Q9UPN7 881 aa11.96□□□□□ -0.5
CDH13-204ENST00000539548 BAG4O95429 457 aaKnown RBP11.95□□□□□ -0.5
CDH13-204ENST00000539548 KLHL40Q2TBA0 621 aa11.95□□□□□ -0.5
CDH13-204ENST00000539548 ZRANB1Q9UGI0 708 aa11.95□□□□□ -0.5
CDH13-204ENST00000539548 FAM83GA6ND36 823 aa11.95□□□□□ -0.5
CDH13-204ENST00000539548 NAP1L5Q96NT1 182 aaPredicted RBP11.95□□□□□ -0.5
CDH13-204ENST00000539548 AKAP12Q02952 1782 aa11.94□□□□□ -0.5
CDH13-204ENST00000539548 NUCB2P80303 420 aa11.94□□□□□ -0.5
CDH13-204ENST00000539548 TRIM44Q96DX7 344 aaPredicted RBP11.94□□□□□ -0.5
CDH13-204ENST00000539548 AK9Q5TCS8 1911 aa11.94□□□□□ -0.5
CDH13-204ENST00000539548 CPS1P31327 1500 aa11.94□□□□□ -0.5
CDH13-204ENST00000539548 ATP10DQ9P241 1426 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms