RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 DIP2AQ14689 1571 aa22.9■■□□□ 1.26
GNE-204ENST00000539208 PTCH1Q13635 1447 aa22.9■■□□□ 1.26
GNE-204ENST00000539208 VIRMAQ69YN4 1812 aaKnown RBP22.9■■□□□ 1.26
GNE-204ENST00000539208 IPO8O15397 1037 aaKnown RBP22.9■■□□□ 1.26
GNE-204ENST00000539208 DDX19BQ9UMR2 479 aa22.89■■□□□ 1.26
GNE-204ENST00000539208 OVOS2A0A0J9YW53 1432 aa22.89■■□□□ 1.25
GNE-204ENST00000539208 USP6P35125 1406 aa22.89■■□□□ 1.25
GNE-204ENST00000539208 OVOS2Q6IE36 1432 aa22.89■■□□□ 1.25
GNE-204ENST00000539208 RRS1Q15050 365 aaKnown RBP22.89■■□□□ 1.25
GNE-204ENST00000539208 NOB1Q9ULX3 412 aaKnown RBP22.89■■□□□ 1.25
GNE-204ENST00000539208 LMOD3Q0VAK6 560 aa22.88■■□□□ 1.25
GNE-204ENST00000539208 SLC26A8Q96RN1 970 aa22.88■■□□□ 1.25
GNE-204ENST00000539208 IFT57Q9NWB7 429 aa22.88■■□□□ 1.25
GNE-204ENST00000539208 THEMISQ8N1K5 641 aaPredicted RBP22.87■■□□□ 1.25
GNE-204ENST00000539208 NALCNQ8IZF0 1738 aa22.87■■□□□ 1.25
GNE-204ENST00000539208 ZNF853P0CG23 659 aa22.87■■□□□ 1.25
GNE-204ENST00000539208 GNAI1P63096 354 aa22.87■■□□□ 1.25
GNE-204ENST00000539208 AMOTL2Q9Y2J4 779 aa22.87■■□□□ 1.25
GNE-204ENST00000539208 SSH2Q76I76 1423 aa22.86■■□□□ 1.25
GNE-204ENST00000539208 USP31Q70CQ4 1352 aa22.85■■□□□ 1.25
GNE-204ENST00000539208 HDAC1Q13547 482 aaPredicted RBP22.84■■□□□ 1.25
GNE-204ENST00000539208 DLG5Q8TDM6 1919 aa22.83■■□□□ 1.25
GNE-204ENST00000539208 PDZRN3Q9UPQ7 1066 aa22.83■■□□□ 1.24
GNE-204ENST00000539208 TTC21AQ8NDW8 1320 aa22.82■■□□□ 1.24
GNE-204ENST00000539208 VAMP4O75379 141 aa22.82■■□□□ 1.24
GNE-204ENST00000539208 ITPRIPQ8IWB1 547 aa22.82■■□□□ 1.24
GNE-204ENST00000539208 ARHGAP45Q92619 1136 aa22.81■■□□□ 1.24
GNE-204ENST00000539208 CFAP44Q96MT7 982 aa22.81■■□□□ 1.24
GNE-204ENST00000539208 LAS1LQ9Y4W2 734 aaKnown RBP22.81■■□□□ 1.24
GNE-204ENST00000539208 EIF4A2Q14240 407 aaKnown RBP22.8■■□□□ 1.24
GNE-204ENST00000539208 TMEM57Q8N5G2 664 aa22.8■■□□□ 1.24
GNE-204ENST00000539208 XRN1Q8IZH2 1706 aaKnown RBP22.8■■□□□ 1.24
GNE-204ENST00000539208 ZBTB40Q9NUA8 1239 aa22.8■■□□□ 1.24
GNE-204ENST00000539208 THUMPD2Q9BTF0 503 aaKnown RBP22.79■■□□□ 1.24
GNE-204ENST00000539208 RIMS1Q86UR5 1692 aaKnown RBP22.79■■□□□ 1.24
GNE-204ENST00000539208 MBIPQ9NS73 344 aa22.79■■□□□ 1.24
GNE-204ENST00000539208 NUTM2FA1L443 756 aa22.77■■□□□ 1.24
GNE-204ENST00000539208 MRPL50Q8N5N7 158 aaKnown RBP22.77■■□□□ 1.24
GNE-204ENST00000539208 RGPD1P0DJD0 1748 aa22.77■■□□□ 1.24
GNE-204ENST00000539208 PEAK1Q9H792 1746 aa22.77■■□□□ 1.24
GNE-204ENST00000539208 PIK3R4Q99570 1358 aa22.77■■□□□ 1.24
GNE-204ENST00000539208 NBR1Q14596 966 aa22.76■■□□□ 1.23
GNE-204ENST00000539208 CHMP4BQ9H444 224 aaKnown RBP22.75■■□□□ 1.23
GNE-204ENST00000539208 ANKARQ7Z5J8 1434 aa22.75■■□□□ 1.23
GNE-204ENST00000539208 SULT6B1Q6IMI4 303 aa22.74■■□□□ 1.23
GNE-204ENST00000539208 SMC5Q8IY18 1101 aa22.74■■□□□ 1.23
GNE-204ENST00000539208 TSPYL6Q8N831 410 aa22.74■■□□□ 1.23
GNE-204ENST00000539208 USP19O94966 1318 aa22.74■■□□□ 1.23
GNE-204ENST00000539208 TWISTNBQ3B726 338 aaPredicted RBP22.73■■□□□ 1.23
GNE-204ENST00000539208 HSP90AB2PQ58FF8 381 aa22.72■■□□□ 1.23
GNE-204ENST00000539208 AEBP1Q8IUX7 1158 aa22.72■■□□□ 1.23
GNE-204ENST00000539208 CEP170BQ9Y4F5 1589 aaPredicted RBP22.71■■□□□ 1.23
GNE-204ENST00000539208 ARHGEF10O15013 1369 aa22.71■■□□□ 1.23
GNE-204ENST00000539208 RGPD8O14715 1765 aaPredicted RBP22.7■■□□□ 1.23
GNE-204ENST00000539208 FAM83GA6ND36 823 aa22.7■■□□□ 1.23
GNE-204ENST00000539208 DAXXQ9UER7 740 aaPredicted RBP22.7■■□□□ 1.23
GNE-204ENST00000539208 SBNO1A3KN83 1393 aa22.7■■□□□ 1.22
GNE-204ENST00000539208 PLPPR3Q6T4P5 718 aa22.7■■□□□ 1.22
GNE-204ENST00000539208 NGDNQ8NEJ9 315 aaKnown RBP22.7■■□□□ 1.22
GNE-204ENST00000539208 C8orf58Q8NAV2 365 aa22.69■■□□□ 1.22
GNE-204ENST00000539208 USP35Q9P2H5 1018 aa22.69■■□□□ 1.22
GNE-204ENST00000539208 FMN2Q9NZ56 1722 aa22.69■■□□□ 1.22
GNE-204ENST00000539208 ABCC4O15439 1325 aa22.69■■□□□ 1.22
GNE-204ENST00000539208 ZBTB7BO15156 539 aaPredicted RBP22.69■■□□□ 1.22
GNE-204ENST00000539208 FLT4P35916 1363 aa22.68■■□□□ 1.22
GNE-204ENST00000539208 MAP3K19Q56UN5 1328 aa22.68■■□□□ 1.22
GNE-204ENST00000539208 SEC24BO95487 1268 aa22.68■■□□□ 1.22
GNE-204ENST00000539208 HAP1P54257 671 aaPredicted RBP22.68■■□□□ 1.22
GNE-204ENST00000539208 RTL5Q5HYW3 569 aaPredicted RBP22.67■■□□□ 1.22
GNE-204ENST00000539208 PIK3C2AO00443 1686 aa22.67■■□□□ 1.22
GNE-204ENST00000539208 CHL1O00533 1208 aa22.67■■□□□ 1.22
GNE-204ENST00000539208 DCTN1Q14203 1278 aa22.66■■□□□ 1.22
GNE-204ENST00000539208 USP54Q70EL1 1684 aa22.66■■□□□ 1.22
GNE-204ENST00000539208 KCNA6P17658 529 aa22.66■■□□□ 1.22
GNE-204ENST00000539208 API5Q9BZZ5 524 aaKnown RBP22.66■■□□□ 1.22
GNE-204ENST00000539208 KIF24Q5T7B8 1368 aa22.65■■□□□ 1.22
GNE-204ENST00000539208 KIAA0232Q92628 1395 aa22.65■■□□□ 1.22
GNE-204ENST00000539208 KDRP35968 1356 aa22.65■■□□□ 1.22
GNE-204ENST00000539208 ELL2O00472 640 aaPredicted RBP22.65■■□□□ 1.22
GNE-204ENST00000539208 NUCB1Q02818 461 aa22.63■■□□□ 1.21
GNE-204ENST00000539208 UPF2Q9HAU5 1272 aaKnown RBP22.63■■□□□ 1.21
GNE-204ENST00000539208 TRHP20396 242 aaPredicted RBP22.62■■□□□ 1.21
GNE-204ENST00000539208 SLC4A3P48751 1232 aa22.62■■□□□ 1.21
GNE-204ENST00000539208 CRB1P82279 1406 aa22.61■■□□□ 1.21
GNE-204ENST00000539208 IGSF1Q8N6C5 1336 aa22.61■■□□□ 1.21
GNE-204ENST00000539208 ZNF142P52746 1687 aaPredicted RBP22.6■■□□□ 1.21
GNE-204ENST00000539208 CHD2O14647 1828 aaKnown RBP22.6■■□□□ 1.21
GNE-204ENST00000539208 GCC1Q96CN9 775 aa22.6■■□□□ 1.21
GNE-204ENST00000539208 TBC1D32Q96NH3 1257 aa22.6■■□□□ 1.21
GNE-204ENST00000539208 SOX12O15370 315 aa22.59■■□□□ 1.21
GNE-204ENST00000539208 AMPHP49418 695 aa22.59■■□□□ 1.21
GNE-204ENST00000539208 MCM10Q7L590 875 aa22.59■■□□□ 1.21
GNE-204ENST00000539208 MARF1Q9Y4F3 1742 aaKnown RBP22.59■■□□□ 1.21
GNE-204ENST00000539208 ANKLE2Q86XL3 938 aa22.59■■□□□ 1.21
GNE-204ENST00000539208 NLRP6P59044 892 aa22.58■■□□□ 1.21
GNE-204ENST00000539208 DEKP35659 375 aaKnown RBP22.57■■□□□ 1.2
GNE-204ENST00000539208 CHD1LQ86WJ1 897 aa22.57■■□□□ 1.2
GNE-204ENST00000539208 EYA1Q99502 592 aa22.57■■□□□ 1.2
GNE-204ENST00000539208 MTHFSDQ2M296 383 aaKnown RBP22.56■■□□□ 1.2
GNE-204ENST00000539208 BECN1Q14457 450 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms