RNA–Protein interactions for RNA: ENST00000539176.1

KLHL42-202, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-202ENST00000539176 USP19O94966 1318 aa33.36■■■□□ 2.93
KLHL42-202ENST00000539176 IQSEC2Q5JU85 1478 aa33.36■■■□□ 2.93
KLHL42-202ENST00000539176 ZBTB7CA1YPR0 619 aa33.36■■■□□ 2.93
KLHL42-202ENST00000539176 CDCA7LQ96GN5 454 aa33.36■■■□□ 2.93
KLHL42-202ENST00000539176 TCP11L2Q8N4U5 519 aa33.35■■■□□ 2.93
KLHL42-202ENST00000539176 MED1Q15648 1581 aaPredicted RBP33.35■■■□□ 2.93
KLHL42-202ENST00000539176 GCP02774 474 aa33.35■■■□□ 2.93
KLHL42-202ENST00000539176 PLEKHF1Q96S99 279 aa33.35■■■□□ 2.93
KLHL42-202ENST00000539176 TSHZ2Q9NRE2 1034 aa33.35■■■□□ 2.93
KLHL42-202ENST00000539176 KCNH5Q8NCM2 988 aa33.34■■■□□ 2.93
KLHL42-202ENST00000539176 HOXC9P31274 260 aa33.33■■■□□ 2.93
KLHL42-202ENST00000539176 SPATA31A3Q5VYP0 1347 aa33.33■■■□□ 2.93
KLHL42-202ENST00000539176 NEUROD2Q15784 382 aa33.33■■■□□ 2.93
KLHL42-202ENST00000539176 RSPH6AQ9H0K4 717 aa33.32■■■□□ 2.92
KLHL42-202ENST00000539176 GOLGA2Q08379 1002 aa33.31■■■□□ 2.92
KLHL42-202ENST00000539176 PRKAR2BP31323 418 aa33.29■■■□□ 2.92
KLHL42-202ENST00000539176 SOS2Q07890 1332 aaPredicted RBP33.29■■■□□ 2.92
KLHL42-202ENST00000539176 NHSL1Q5SYE7 1610 aa33.29■■■□□ 2.92
KLHL42-202ENST00000539176 CABLES1Q8TDN4 633 aa33.29■■■□□ 2.92
KLHL42-202ENST00000539176 FCHSD2O94868 740 aa33.28■■■□□ 2.92
KLHL42-202ENST00000539176 RGPD1P0DJD0 1748 aa33.28■■■□□ 2.92
KLHL42-202ENST00000539176 PHRF1Q9P1Y6 1649 aaKnown RBP33.27■■■□□ 2.92
KLHL42-202ENST00000539176 AEBP1Q8IUX7 1158 aa33.27■■■□□ 2.92
KLHL42-202ENST00000539176 ROBO1Q9Y6N7 1651 aa33.26■■■□□ 2.92
KLHL42-202ENST00000539176 KIF24Q5T7B8 1368 aa33.26■■■□□ 2.92
KLHL42-202ENST00000539176 MAPK8IP3Q9UPT6 1336 aa33.26■■■□□ 2.91
KLHL42-202ENST00000539176 LTV1Q96GA3 475 aaPredicted RBP33.26■■■□□ 2.91
KLHL42-202ENST00000539176 RTL1A6NKG5 1358 aa33.25■■■□□ 2.91
KLHL42-202ENST00000539176 DUSP27Q5VZP5 1158 aa33.24■■■□□ 2.91
KLHL42-202ENST00000539176 ARHGEF25Q86VW2 580 aa33.24■■■□□ 2.91
KLHL42-202ENST00000539176 IP6K1Q92551 441 aa33.24■■■□□ 2.91
KLHL42-202ENST00000539176 CRYBG1Q9Y4K1 1723 aa33.24■■■□□ 2.91
KLHL42-202ENST00000539176 ZC3H6P61129 1189 aaKnown RBP33.23■■■□□ 2.91
KLHL42-202ENST00000539176 SULT6B1Q6IMI4 303 aa33.23■■■□□ 2.91
KLHL42-202ENST00000539176 ARHGEF10O15013 1369 aa33.23■■■□□ 2.91
KLHL42-202ENST00000539176 PHACTR3Q96KR7 559 aa33.22■■■□□ 2.91
KLHL42-202ENST00000539176 NCBP3Q53F19 620 aaKnown RBP33.22■■■□□ 2.91
KLHL42-202ENST00000539176 PNNQ9H307 717 aaKnown RBP33.22■■■□□ 2.91
KLHL42-202ENST00000539176 TMPOP42166 694 aaKnown RBP33.2■■■□□ 2.91
KLHL42-202ENST00000539176 SLFN5Q08AF3 891 aa33.2■■■□□ 2.91
KLHL42-202ENST00000539176 B4GALNT3Q6L9W6 998 aa33.2■■■□□ 2.91
KLHL42-202ENST00000539176 WWC1Q8IX03 1113 aa33.2■■■□□ 2.9
KLHL42-202ENST00000539176 TRMT2AQ8IZ69 625 aaKnown RBP33.19■■■□□ 2.9
KLHL42-202ENST00000539176 EYA1Q99502 592 aa33.19■■■□□ 2.9
KLHL42-202ENST00000539176 E9PSI1 815 aa33.18■■■□□ 2.9
KLHL42-202ENST00000539176 SPINK5Q9NQ38 1064 aaPredicted RBP33.17■■■□□ 2.9
KLHL42-202ENST00000539176 RGPD5Q99666 1765 aa33.16■■■□□ 2.9
KLHL42-202ENST00000539176 PHF23Q9BUL5 403 aaPredicted RBP33.15■■■□□ 2.9
KLHL42-202ENST00000539176 IGSF1Q8N6C5 1336 aa33.15■■■□□ 2.9
KLHL42-202ENST00000539176 RGPD2P0DJD1 1756 aa33.14■■■□□ 2.9
KLHL42-202ENST00000539176 NEFMP07197 916 aa33.14■■■□□ 2.9
KLHL42-202ENST00000539176 CCDC136Q96JN2 1154 aa33.14■■■□□ 2.9
KLHL42-202ENST00000539176 AXIN2Q9Y2T1 843 aa33.14■■■□□ 2.9
KLHL42-202ENST00000539176 RIPK4P57078 832 aa33.12■■■□□ 2.89
KLHL42-202ENST00000539176 TRIM35Q9UPQ4 493 aa33.12■■■□□ 2.89
KLHL42-202ENST00000539176 CCDC27Q2M243 656 aa33.11■■■□□ 2.89
KLHL42-202ENST00000539176 USHBP1Q8N6Y0 703 aa33.11■■■□□ 2.89
KLHL42-202ENST00000539176 ABCA3Q99758 1704 aa33.1■■■□□ 2.89
KLHL42-202ENST00000539176 PIP4K2BP78356 416 aa33.1■■■□□ 2.89
KLHL42-202ENST00000539176 CHRNA2Q15822 529 aa33.1■■■□□ 2.89
KLHL42-202ENST00000539176 AHDC1Q5TGY3 1603 aaPredicted RBP33.1■■■□□ 2.89
KLHL42-202ENST00000539176 NFE2L2Q16236 605 aa33.09■■■□□ 2.89
KLHL42-202ENST00000539176 LRRC59Q96AG4 307 aaKnown RBP33.08■■■□□ 2.89
KLHL42-202ENST00000539176 KIAA0232Q92628 1395 aa33.08■■■□□ 2.89
KLHL42-202ENST00000539176 COL18A1P39060 1754 aa33.08■■■□□ 2.89
KLHL42-202ENST00000539176 DLG5Q8TDM6 1919 aa33.08■■■□□ 2.89
KLHL42-202ENST00000539176 KDRP35968 1356 aa33.07■■■□□ 2.88
KLHL42-202ENST00000539176 ANKRD24Q8TF21 1146 aa33.07■■■□□ 2.88
KLHL42-202ENST00000539176 NBPF6Q5VWK0 638 aa33.06■■■□□ 2.88
KLHL42-202ENST00000539176 NBPF4Q96M43 638 aa33.06■■■□□ 2.88
KLHL42-202ENST00000539176 TOM1O60784 492 aa33.05■■■□□ 2.88
KLHL42-202ENST00000539176 GOLGA6L2Q8N9W4 650 aaPredicted RBP33.05■■■□□ 2.88
KLHL42-202ENST00000539176 HAP1P54257 671 aaPredicted RBP33.03■■■□□ 2.88
KLHL42-202ENST00000539176 WDR63Q8IWG1 891 aa33.03■■■□□ 2.88
KLHL42-202ENST00000539176 UBAP1LF5GYI3 381 aa33.02■■■□□ 2.88
KLHL42-202ENST00000539176 PHLPP1O60346 1717 aa33.02■■■□□ 2.88
KLHL42-202ENST00000539176 EXOC6Q8TAG9 804 aa33.01■■■□□ 2.88
KLHL42-202ENST00000539176 CPDO75976 1380 aa33.01■■■□□ 2.87
KLHL42-202ENST00000539176 THUMPD2Q9BTF0 503 aaKnown RBP32.99■■■□□ 2.87
KLHL42-202ENST00000539176 ERBB3P21860 1342 aa32.97■■■□□ 2.87
KLHL42-202ENST00000539176 PRDM11Q9NQV5 511 aa32.97■■■□□ 2.87
KLHL42-202ENST00000539176 FAM83GA6ND36 823 aa32.96■■■□□ 2.87
KLHL42-202ENST00000539176 MTHFSDQ2M296 383 aaKnown RBP32.96■■■□□ 2.87
KLHL42-202ENST00000539176 COL16A1Q07092 1604 aaPredicted RBP32.96■■■□□ 2.87
KLHL42-202ENST00000539176 DCTN1Q14203 1278 aa32.93■■■□□ 2.86
KLHL42-202ENST00000539176 CAMTA1Q9Y6Y1 1673 aa32.93■■■□□ 2.86
KLHL42-202ENST00000539176 ABCC6O95255 1503 aa32.92■■■□□ 2.86
KLHL42-202ENST00000539176 PLIN1O60240 522 aa32.92■■■□□ 2.86
KLHL42-202ENST00000539176 CERKQ8TCT0 537 aa32.91■■■□□ 2.86
KLHL42-202ENST00000539176 TSR2Q969E8 191 aaKnown RBP32.9■■■□□ 2.86
KLHL42-202ENST00000539176 RBM19Q9Y4C8 960 aaKnown RBP32.9■■■□□ 2.86
KLHL42-202ENST00000539176 NCAPD2Q15021 1401 aa32.9■■■□□ 2.86
KLHL42-202ENST00000539176 LMO7Q8WWI1 1683 aa32.89■■■□□ 2.86
KLHL42-202ENST00000539176 CSB-PGBD3P0DP91 1061 aa32.89■■■□□ 2.86
KLHL42-202ENST00000539176 NLRP2Q9NX02 1062 aa32.89■■■□□ 2.86
KLHL42-202ENST00000539176 COL22A1Q8NFW1 1626 aaPredicted RBP32.89■■■□□ 2.86
KLHL42-202ENST00000539176 LMOD3Q0VAK6 560 aa32.88■■■□□ 2.85
KLHL42-202ENST00000539176 CRBNQ96SW2 442 aa32.87■■■□□ 2.85
KLHL42-202ENST00000539176 IL16Q14005 1332 aa32.87■■■□□ 2.85
KLHL42-202ENST00000539176 MYH16Q9H6N6 1097 aa32.86■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms