RNA–Protein interactions for RNA: ENST00000538941.6

SCAPER-203, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 1 (best) BASIC

Gene SCAPER, Length 4,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-203ENST00000538941 KDM5DQ9BY66 1539 aa8.25□□□□□ -1.09
SCAPER-203ENST00000538941 TAF3Q5VWG9 929 aa8.25□□□□□ -1.09
SCAPER-203ENST00000538941 SYCP2Q9BX26 1530 aa8.25□□□□□ -1.09
SCAPER-203ENST00000538941 ATP10BO94823 1461 aa8.25□□□□□ -1.09
SCAPER-203ENST00000538941 ZNF445P59923 1031 aa8.25□□□□□ -1.09
SCAPER-203ENST00000538941 MPNDQ8N594 471 aa8.25□□□□□ -1.09
SCAPER-203ENST00000538941 RUFY2Q8WXA3 655 aa8.25□□□□□ -1.09
SCAPER-203ENST00000538941 VPS37CA5D8V6 355 aaPredicted RBP8.24□□□□□ -1.09
SCAPER-203ENST00000538941 PRIM1P49642 420 aaKnown RBP8.24□□□□□ -1.09
SCAPER-203ENST00000538941 CBX1P83916 185 aa8.24□□□□□ -1.09
SCAPER-203ENST00000538941 ZBTB40Q9NUA8 1239 aa8.24□□□□□ -1.09
SCAPER-203ENST00000538941 NAP1L2Q9ULW6 460 aaPredicted RBP8.24□□□□□ -1.09
SCAPER-203ENST00000538941 ADGRF5Q8IZF2 1346 aa8.24□□□□□ -1.09
SCAPER-203ENST00000538941 BECN2A8MW95 431 aa8.24□□□□□ -1.09
SCAPER-203ENST00000538941 UVSSAQ2YD98 709 aa8.24□□□□□ -1.09
SCAPER-203ENST00000538941 RBM42Q9BTD8 480 aaKnown RBP8.24□□□□□ -1.09
SCAPER-203ENST00000538941 CCDC94Q9BW85 323 aaPredicted RBP8.24□□□□□ -1.09
SCAPER-203ENST00000538941 BCL11BQ9C0K0 894 aaPredicted RBP8.24□□□□□ -1.09
SCAPER-203ENST00000538941 FIBPO43427 364 aa8.24□□□□□ -1.09
SCAPER-203ENST00000538941 CCDC192P0DO97 292 aa8.24□□□□□ -1.09
SCAPER-203ENST00000538941 CCDC183Q5T5S1 534 aa8.24□□□□□ -1.09
SCAPER-203ENST00000538941 CARD14Q9BXL6 1004 aa8.24□□□□□ -1.09
SCAPER-203ENST00000538941 CHMP4AQ9BY43 222 aa8.24□□□□□ -1.09
SCAPER-203ENST00000538941 ZKSCAN1P17029 563 aaPredicted RBP8.23□□□□□ -1.09
SCAPER-203ENST00000538941 TTC22Q5TAA0 569 aa8.23□□□□□ -1.09
SCAPER-203ENST00000538941 ZHX1Q9UKY1 873 aaPredicted RBP8.23□□□□□ -1.09
SCAPER-203ENST00000538941 SOX12O15370 315 aa8.23□□□□□ -1.09
SCAPER-203ENST00000538941 NFE2L2Q16236 605 aa8.23□□□□□ -1.09
SCAPER-203ENST00000538941 TPD52L1Q16890 204 aaPredicted RBP8.23□□□□□ -1.09
SCAPER-203ENST00000538941 SPC24Q8NBT2 197 aa8.23□□□□□ -1.09
SCAPER-203ENST00000538941 TRPM1Q7Z4N2 1603 aa8.23□□□□□ -1.09
SCAPER-203ENST00000538941 CLASP1Q7Z460 1538 aa8.23□□□□□ -1.09
SCAPER-203ENST00000538941 TULP1O00294 542 aaPredicted RBP8.23□□□□□ -1.09
SCAPER-203ENST00000538941 ARHGAP45Q92619 1136 aa8.23□□□□□ -1.09
SCAPER-203ENST00000538941 CHMP3Q9Y3E7 222 aa8.23□□□□□ -1.09
SCAPER-203ENST00000538941 MAST1Q9Y2H9 1570 aa8.23□□□□□ -1.09
SCAPER-203ENST00000538941 RPGRIP1LQ68CZ1 1315 aa8.23□□□□□ -1.09
SCAPER-203ENST00000538941 KDM5AP29375 1690 aaKnown RBP8.23□□□□□ -1.09
SCAPER-203ENST00000538941 GAS2L3Q86XJ1 694 aa8.23□□□□□ -1.09
SCAPER-203ENST00000538941 ARHGEF5Q12774 1597 aa8.22□□□□□ -1.09
SCAPER-203ENST00000538941 HSP90B1P14625 803 aaKnown RBP8.22□□□□□ -1.09
SCAPER-203ENST00000538941 PPP4R3BQ5MIZ7 849 aa8.22□□□□□ -1.09
SCAPER-203ENST00000538941 HDAC5Q9UQL6 1122 aa8.22□□□□□ -1.09
SCAPER-203ENST00000538941 ATAD2Q6PL18 1390 aa8.22□□□□□ -1.09
SCAPER-203ENST00000538941 BICD2Q8TD16 824 aa8.22□□□□□ -1.09
SCAPER-203ENST00000538941 TRIM5Q9C035 493 aa8.22□□□□□ -1.09
SCAPER-203ENST00000538941 RBSNQ9H1K0 784 aa8.22□□□□□ -1.09
SCAPER-203ENST00000538941 USP25Q9UHP3 1055 aa8.22□□□□□ -1.09
SCAPER-203ENST00000538941 WDR7Q9Y4E6 1490 aa8.22□□□□□ -1.09
SCAPER-203ENST00000538941 H3BQV1 296 aa8.21□□□□□ -1.09
SCAPER-203ENST00000538941 TEX35Q5T0J7 233 aa8.21□□□□□ -1.09
SCAPER-203ENST00000538941 IFFO2Q5TF58 517 aa8.21□□□□□ -1.09
SCAPER-203ENST00000538941 AEBP1Q8IUX7 1158 aa8.21□□□□□ -1.09
SCAPER-203ENST00000538941 CCDC112Q8NEF3 446 aa8.21□□□□□ -1.09
SCAPER-203ENST00000538941 ZNF500O60304 480 aaPredicted RBP8.21□□□□□ -1.09
SCAPER-203ENST00000538941 GNAI3P08754 354 aa8.21□□□□□ -1.1
SCAPER-203ENST00000538941 LRRCC1Q9C099 1032 aa8.21□□□□□ -1.1
SCAPER-203ENST00000538941 ANKRD36BQ8N2N9 1353 aa8.21□□□□□ -1.1
SCAPER-203ENST00000538941 ADCY5O95622 1261 aa8.21□□□□□ -1.1
SCAPER-203ENST00000538941 GNAI2P04899 355 aa8.21□□□□□ -1.1
SCAPER-203ENST00000538941 CCT4P50991 539 aaKnown RBP8.2□□□□□ -1.1
SCAPER-203ENST00000538941 FKBP5Q13451 457 aaPredicted RBP8.2□□□□□ -1.1
SCAPER-203ENST00000538941 NOLC1Q14978 699 aaKnown RBP eCLIP8.2□□□□□ -1.1
SCAPER-203ENST00000538941 SRCIN1Q9C0H9 1055 aa8.2□□□□□ -1.1
SCAPER-203ENST00000538941 IBTKQ9P2D0 1353 aaPredicted RBP8.2□□□□□ -1.1
SCAPER-203ENST00000538941 CNTROBQ8N137 903 aa8.2□□□□□ -1.1
SCAPER-203ENST00000538941 GTPBP4Q9BZE4 634 aaKnown RBP8.2□□□□□ -1.1
SCAPER-203ENST00000538941 PAXIP1Q6ZW49 1069 aaPredicted RBP8.2□□□□□ -1.1
SCAPER-203ENST00000538941 ARGLU1Q9NWB6 273 aaPredicted RBP8.2□□□□□ -1.1
SCAPER-203ENST00000538941 HDGFP51858 240 aaKnown RBP8.2□□□□□ -1.1
SCAPER-203ENST00000538941 CROCC2H7BZ55 1655 aa8.2□□□□□ -1.1
SCAPER-203ENST00000538941 TSPYL4Q9UJ04 414 aa8.19□□□□□ -1.1
SCAPER-203ENST00000538941 SMARCA5O60264 1052 aaPredicted RBP8.19□□□□□ -1.1
SCAPER-203ENST00000538941 PDCP20941 246 aa8.19□□□□□ -1.1
SCAPER-203ENST00000538941 BRD2P25440 801 aaKnown RBP8.19□□□□□ -1.1
SCAPER-203ENST00000538941 NOS1P29475 1434 aa8.19□□□□□ -1.1
SCAPER-203ENST00000538941 ERBB4Q15303 1308 aa8.19□□□□□ -1.1
SCAPER-203ENST00000538941 HSP90AB4PQ58FF6 505 aa8.19□□□□□ -1.1
SCAPER-203ENST00000538941 RNF20Q5VTR2 975 aa8.19□□□□□ -1.1
SCAPER-203ENST00000538941 TMX3Q96JJ7 454 aa8.19□□□□□ -1.1
SCAPER-203ENST00000538941 KLHL34Q8N239 644 aa8.19□□□□□ -1.1
SCAPER-203ENST00000538941 BBXQ8WY36 941 aaPredicted RBP8.19□□□□□ -1.1
SCAPER-203ENST00000538941 LMBRD1Q9NUN5 540 aa8.19□□□□□ -1.1
SCAPER-203ENST00000538941 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.19□□□□□ -1.1
SCAPER-203ENST00000538941 SDSP20132 328 aa8.18□□□□□ -1.1
SCAPER-203ENST00000538941 THUMPD2Q9BTF0 503 aaKnown RBP8.18□□□□□ -1.1
SCAPER-203ENST00000538941 KRT85P78386 507 aa8.18□□□□□ -1.1
SCAPER-203ENST00000538941 MRPL50Q8N5N7 158 aaKnown RBP8.18□□□□□ -1.1
SCAPER-203ENST00000538941 TNMDQ9H2S6 317 aa8.18□□□□□ -1.1
SCAPER-203ENST00000538941 CGNQ9P2M7 1197 aaKnown RBP8.18□□□□□ -1.1
SCAPER-203ENST00000538941 SLC4A2P04920 1241 aa8.18□□□□□ -1.1
SCAPER-203ENST00000538941 UBTFL1P0CB47 393 aaPredicted RBP8.18□□□□□ -1.1
SCAPER-203ENST00000538941 GPS2Q13227 327 aa8.18□□□□□ -1.1
SCAPER-203ENST00000538941 PRAM1Q96QH2 718 aa8.18□□□□□ -1.1
SCAPER-203ENST00000538941 NUP62CLQ9H1M0 184 aa8.18□□□□□ -1.1
SCAPER-203ENST00000538941 E9PCH4 1651 aa8.18□□□□□ -1.1
SCAPER-203ENST00000538941 ZGPATQ8N5A5 531 aaKnown RBP8.18□□□□□ -1.1
SCAPER-203ENST00000538941 USP26Q9BXU7 913 aa8.18□□□□□ -1.1
SCAPER-203ENST00000538941 C14orf93Q9H972 538 aaKnown RBP8.18□□□□□ -1.1
SCAPER-203ENST00000538941 PSMA5P28066 241 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms