RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 MEX3CQ5U5Q3 659 aaKnown RBP18.69■□□□□ 0.58
CDCA3-207ENST00000538862 IGHDP01880 384 aa18.68■□□□□ 0.58
CDCA3-207ENST00000538862 RGS3P49796 1198 aa18.68■□□□□ 0.58
CDCA3-207ENST00000538862 NEUROD2Q15784 382 aa18.68■□□□□ 0.58
CDCA3-207ENST00000538862 CDK19Q9BWU1 502 aa18.68■□□□□ 0.58
CDCA3-207ENST00000538862 RRP7AQ9Y3A4 280 aaKnown RBP18.68■□□□□ 0.58
CDCA3-207ENST00000538862 KRT28Q7Z3Y7 464 aa18.67■□□□□ 0.58
CDCA3-207ENST00000538862 LAS1LQ9Y4W2 734 aaKnown RBP18.67■□□□□ 0.58
CDCA3-207ENST00000538862 PANK1Q8TE04 598 aa18.66■□□□□ 0.58
CDCA3-207ENST00000538862 MYH16Q9H6N6 1097 aa18.66■□□□□ 0.58
CDCA3-207ENST00000538862 DAXXQ9UER7 740 aaPredicted RBP18.66■□□□□ 0.58
CDCA3-207ENST00000538862 COG6Q9Y2V7 657 aa18.66■□□□□ 0.58
CDCA3-207ENST00000538862 VIRMAQ69YN4 1812 aaKnown RBP18.66■□□□□ 0.58
CDCA3-207ENST00000538862 MAPK8IP3Q9UPT6 1336 aa18.66■□□□□ 0.58
CDCA3-207ENST00000538862 ATP7BP35670 1465 aa18.66■□□□□ 0.58
CDCA3-207ENST00000538862 NEFMP07197 916 aa18.66■□□□□ 0.58
CDCA3-207ENST00000538862 CABP2Q9NPB3 220 aa18.66■□□□□ 0.58
CDCA3-207ENST00000538862 NUDT16Q96DE0 195 aaKnown RBP18.65■□□□□ 0.58
CDCA3-207ENST00000538862 ATAD2Q6PL18 1390 aa18.64■□□□□ 0.57
CDCA3-207ENST00000538862 PLEKHG5O94827 1062 aa18.64■□□□□ 0.57
CDCA3-207ENST00000538862 ADAMTS2O95450 1211 aa18.64■□□□□ 0.57
CDCA3-207ENST00000538862 CT47B1P0C2W7 299 aaPredicted RBP18.64■□□□□ 0.57
CDCA3-207ENST00000538862 PSME1Q06323 249 aa18.64■□□□□ 0.57
CDCA3-207ENST00000538862 POTEAQ6S8J7 498 aa18.64■□□□□ 0.57
CDCA3-207ENST00000538862 A0A1W2PP64 1363 aa18.63■□□□□ 0.57
CDCA3-207ENST00000538862 ITSN1Q15811 1721 aa18.63■□□□□ 0.57
CDCA3-207ENST00000538862 U2AF1L5P0DN76 240 aaPredicted RBP18.63■□□□□ 0.57
CDCA3-207ENST00000538862 U2AF1Q01081 240 aaKnown RBP eCLIP18.63■□□□□ 0.57
CDCA3-207ENST00000538862 FRAT1Q92837 279 aaPredicted RBP18.63■□□□□ 0.57
CDCA3-207ENST00000538862 COL22A1Q8NFW1 1626 aaPredicted RBP18.63■□□□□ 0.57
CDCA3-207ENST00000538862 SPATA31A3Q5VYP0 1347 aa18.62■□□□□ 0.57
CDCA3-207ENST00000538862 SRPK2P78362 688 aaKnown RBP18.62■□□□□ 0.57
CDCA3-207ENST00000538862 C8orf37Q96NL8 207 aa18.62■□□□□ 0.57
CDCA3-207ENST00000538862 ANKRD26Q9UPS8 1709 aa18.62■□□□□ 0.57
CDCA3-207ENST00000538862 LMOD2Q6P5Q4 547 aa18.61■□□□□ 0.57
CDCA3-207ENST00000538862 TERF2IPQ9NYB0 399 aa18.61■□□□□ 0.57
CDCA3-207ENST00000538862 TOPAZ1Q8N9V7 1692 aa18.61■□□□□ 0.57
CDCA3-207ENST00000538862 NGDNQ8NEJ9 315 aaKnown RBP18.61■□□□□ 0.57
CDCA3-207ENST00000538862 TNS3Q68CZ2 1445 aa18.6■□□□□ 0.57
CDCA3-207ENST00000538862 TRPM3Q9HCF6 1732 aaPredicted RBP18.59■□□□□ 0.57
CDCA3-207ENST00000538862 PLEKHF1Q96S99 279 aa18.59■□□□□ 0.57
CDCA3-207ENST00000538862 COL3A1P02461 1466 aaPredicted RBP18.58■□□□□ 0.57
CDCA3-207ENST00000538862 AFF2P51816 1311 aa18.58■□□□□ 0.56
CDCA3-207ENST00000538862 CABLES1Q8TDN4 633 aa18.57■□□□□ 0.56
CDCA3-207ENST00000538862 SBNO1A3KN83 1393 aa18.57■□□□□ 0.56
CDCA3-207ENST00000538862 RLBP1P12271 317 aa18.57■□□□□ 0.56
CDCA3-207ENST00000538862 CCDC61Q9Y6R9 512 aa18.57■□□□□ 0.56
CDCA3-207ENST00000538862 CD163L1Q9NR16 1453 aa18.56■□□□□ 0.56
CDCA3-207ENST00000538862 FYB1O15117 783 aa18.56■□□□□ 0.56
CDCA3-207ENST00000538862 PCDHB15Q9Y5E8 787 aa18.56■□□□□ 0.56
CDCA3-207ENST00000538862 ACEP12821 1306 aa18.55■□□□□ 0.56
CDCA3-207ENST00000538862 IL16Q14005 1332 aa18.55■□□□□ 0.56
CDCA3-207ENST00000538862 NGLY1Q96IV0 654 aa18.55■□□□□ 0.56
CDCA3-207ENST00000538862 GGNBP2Q9H3C7 697 aa18.55■□□□□ 0.56
CDCA3-207ENST00000538862 RWDD1Q9H446 243 aaPredicted RBP18.55■□□□□ 0.56
CDCA3-207ENST00000538862 PPIP5K1Q6PFW1 1433 aa18.55■□□□□ 0.56
CDCA3-207ENST00000538862 TMPOP42166 694 aaKnown RBP18.55■□□□□ 0.56
CDCA3-207ENST00000538862 ZKSCAN2Q63HK3 967 aa18.55■□□□□ 0.56
CDCA3-207ENST00000538862 MARF1Q9Y4F3 1742 aaKnown RBP18.54■□□□□ 0.56
CDCA3-207ENST00000538862 ALS2Q96Q42 1657 aa18.54■□□□□ 0.56
CDCA3-207ENST00000538862 SLC4A3P48751 1232 aa18.54■□□□□ 0.56
CDCA3-207ENST00000538862 PNNQ9H307 717 aaKnown RBP18.54■□□□□ 0.56
CDCA3-207ENST00000538862 USP19O94966 1318 aa18.53■□□□□ 0.56
CDCA3-207ENST00000538862 MVPQ14764 893 aaKnown RBP18.53■□□□□ 0.56
CDCA3-207ENST00000538862 ZNF772Q68DY9 489 aaPredicted RBP18.53■□□□□ 0.56
CDCA3-207ENST00000538862 HDGFL2Q7Z4V5 671 aaPredicted RBP18.53■□□□□ 0.56
CDCA3-207ENST00000538862 BCL2L13Q9BXK5 485 aa18.53■□□□□ 0.56
CDCA3-207ENST00000538862 ABCA3Q99758 1704 aa18.53■□□□□ 0.56
CDCA3-207ENST00000538862 U2SURPO15042 1029 aaKnown RBP18.53■□□□□ 0.56
CDCA3-207ENST00000538862 NFKBIBQ15653 356 aa18.53■□□□□ 0.56
CDCA3-207ENST00000538862 TNNQ9UQP3 1299 aa18.53■□□□□ 0.56
CDCA3-207ENST00000538862 PLEKHG3A1L390 1219 aa18.52■□□□□ 0.56
CDCA3-207ENST00000538862 HAP1P54257 671 aaPredicted RBP18.52■□□□□ 0.56
CDCA3-207ENST00000538862 DZIP1LQ8IYY4 767 aaKnown RBP18.52■□□□□ 0.56
CDCA3-207ENST00000538862 CABP1Q9NZU7 370 aa18.52■□□□□ 0.56
CDCA3-207ENST00000538862 TRIM35Q9UPQ4 493 aa18.52■□□□□ 0.56
CDCA3-207ENST00000538862 ARHGEF10O15013 1369 aa18.52■□□□□ 0.55
CDCA3-207ENST00000538862 SOCS7O14512 581 aa18.51■□□□□ 0.55
CDCA3-207ENST00000538862 UBE2Q2Q8WVN8 375 aa18.51■□□□□ 0.55
CDCA3-207ENST00000538862 KIF20BQ96Q89 1820 aa18.5■□□□□ 0.55
CDCA3-207ENST00000538862 NUTM2GQ5VZR2 741 aa18.5■□□□□ 0.55
CDCA3-207ENST00000538862 DIAPH1O60610 1272 aaKnown RBP18.49■□□□□ 0.55
CDCA3-207ENST00000538862 PDZRN3Q9UPQ7 1066 aa18.49■□□□□ 0.55
CDCA3-207ENST00000538862 EXOSC9Q06265 439 aaKnown RBP18.49■□□□□ 0.55
CDCA3-207ENST00000538862 FTSJ3Q8IY81 847 aaKnown RBP18.49■□□□□ 0.55
CDCA3-207ENST00000538862 USP21Q9UK80 565 aa18.48■□□□□ 0.55
CDCA3-207ENST00000538862 EIF5BO60841 1220 aaKnown RBP18.47■□□□□ 0.55
CDCA3-207ENST00000538862 TSR2Q969E8 191 aaKnown RBP18.47■□□□□ 0.55
CDCA3-207ENST00000538862 SMC4Q9NTJ3 1288 aa18.47■□□□□ 0.55
CDCA3-207ENST00000538862 QTRT2Q9H974 415 aaKnown RBP18.47■□□□□ 0.55
CDCA3-207ENST00000538862 CRYBG1Q9Y4K1 1723 aa18.46■□□□□ 0.55
CDCA3-207ENST00000538862 FCHSD2O94868 740 aa18.46■□□□□ 0.55
CDCA3-207ENST00000538862 SEC24BO95487 1268 aa18.46■□□□□ 0.55
CDCA3-207ENST00000538862 RIPK4P57078 832 aa18.46■□□□□ 0.55
CDCA3-207ENST00000538862 FNBP4Q8N3X1 1017 aaPredicted RBP18.46■□□□□ 0.55
CDCA3-207ENST00000538862 DDX19BQ9UMR2 479 aa18.46■□□□□ 0.55
CDCA3-207ENST00000538862 BECN1Q14457 450 aa18.45■□□□□ 0.54
CDCA3-207ENST00000538862 TRIM27P14373 513 aa18.45■□□□□ 0.54
CDCA3-207ENST00000538862 RXRBP28702 533 aa18.45■□□□□ 0.54
CDCA3-207ENST00000538862 HDAC1Q13547 482 aaPredicted RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms