RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 IPO8O15397 1037 aaKnown RBP31.68■■■□□ 2.66
RAB40C-204ENST00000538492 ALDH1L2Q3SY69 923 aa31.67■■■□□ 2.66
RAB40C-204ENST00000538492 PLPPR3Q6T4P5 718 aa31.67■■■□□ 2.66
RAB40C-204ENST00000538492 SLC26A8Q96RN1 970 aa31.66■■■□□ 2.66
RAB40C-204ENST00000538492 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.65■■■□□ 2.66
RAB40C-204ENST00000538492 ELL2O00472 640 aaPredicted RBP31.63■■■□□ 2.65
RAB40C-204ENST00000538492 TSPYL6Q8N831 410 aa31.63■■■□□ 2.65
RAB40C-204ENST00000538492 CALD1Q05682 793 aaKnown RBP31.63■■■□□ 2.65
RAB40C-204ENST00000538492 ACEP12821 1306 aa31.62■■■□□ 2.65
RAB40C-204ENST00000538492 DLG5Q8TDM6 1919 aa31.62■■■□□ 2.65
RAB40C-204ENST00000538492 HDAC1Q13547 482 aaPredicted RBP31.62■■■□□ 2.65
RAB40C-204ENST00000538492 ZBTB40Q9NUA8 1239 aa31.62■■■□□ 2.65
RAB40C-204ENST00000538492 GNAI1P63096 354 aa31.62■■■□□ 2.65
RAB40C-204ENST00000538492 MBIPQ9NS73 344 aa31.62■■■□□ 2.65
RAB40C-204ENST00000538492 PLEKHG1Q9ULL1 1385 aa31.61■■■□□ 2.65
RAB40C-204ENST00000538492 FAM83GA6ND36 823 aa31.61■■■□□ 2.65
RAB40C-204ENST00000538492 VAMP4O75379 141 aa31.61■■■□□ 2.65
RAB40C-204ENST00000538492 IFT57Q9NWB7 429 aa31.61■■■□□ 2.65
RAB40C-204ENST00000538492 TTC21BQ7Z4L5 1316 aa31.6■■■□□ 2.65
RAB40C-204ENST00000538492 USP35Q9P2H5 1018 aa31.6■■■□□ 2.65
RAB40C-204ENST00000538492 ZNF428Q96B54 188 aa31.58■■■□□ 2.65
RAB40C-204ENST00000538492 DCTN1Q14203 1278 aa31.58■■■□□ 2.65
RAB40C-204ENST00000538492 ZNF853P0CG23 659 aa31.57■■■□□ 2.64
RAB40C-204ENST00000538492 AEBP1Q8IUX7 1158 aa31.56■■■□□ 2.64
RAB40C-204ENST00000538492 PTPRUQ92729 1446 aa31.56■■■□□ 2.64
RAB40C-204ENST00000538492 MRPL50Q8N5N7 158 aaKnown RBP31.55■■■□□ 2.64
RAB40C-204ENST00000538492 LMOD3Q0VAK6 560 aa31.55■■■□□ 2.64
RAB40C-204ENST00000538492 EIF4A2Q14240 407 aaKnown RBP31.55■■■□□ 2.64
RAB40C-204ENST00000538492 EID1Q9Y6B2 187 aa31.55■■■□□ 2.64
RAB40C-204ENST00000538492 SOX12O15370 315 aa31.54■■■□□ 2.64
RAB40C-204ENST00000538492 BRPF1P55201 1214 aaPredicted RBP31.54■■■□□ 2.64
RAB40C-204ENST00000538492 CFAP44Q96MT7 982 aa31.54■■■□□ 2.64
RAB40C-204ENST00000538492 NRKQ7Z2Y5 1582 aa31.53■■■□□ 2.64
RAB40C-204ENST00000538492 TOPAZ1Q8N9V7 1692 aa31.53■■■□□ 2.64
RAB40C-204ENST00000538492 PLEKHG3A1L390 1219 aa31.53■■■□□ 2.64
RAB40C-204ENST00000538492 SULT6B1Q6IMI4 303 aa31.53■■■□□ 2.64
RAB40C-204ENST00000538492 TWISTNBQ3B726 338 aaPredicted RBP31.52■■■□□ 2.64
RAB40C-204ENST00000538492 SMC5Q8IY18 1101 aa31.52■■■□□ 2.64
RAB40C-204ENST00000538492 NFKBIBQ15653 356 aa31.52■■■□□ 2.64
RAB40C-204ENST00000538492 C8orf58Q8NAV2 365 aa31.52■■■□□ 2.64
RAB40C-204ENST00000538492 UPF2Q9HAU5 1272 aaKnown RBP31.52■■■□□ 2.64
RAB40C-204ENST00000538492 USP6P35125 1406 aa31.51■■■□□ 2.63
RAB40C-204ENST00000538492 BCL11AQ9H165 835 aa31.51■■■□□ 2.63
RAB40C-204ENST00000538492 AMOTL2Q9Y2J4 779 aa31.51■■■□□ 2.63
RAB40C-204ENST00000538492 OVOS2A0A0J9YW53 1432 aa31.49■■■□□ 2.63
RAB40C-204ENST00000538492 OVOS2Q6IE36 1432 aa31.49■■■□□ 2.63
RAB40C-204ENST00000538492 HSP90AB2PQ58FF8 381 aa31.48■■■□□ 2.63
RAB40C-204ENST00000538492 ARHGAP45Q92619 1136 aa31.46■■■□□ 2.63
RAB40C-204ENST00000538492 TBC1D32Q96NH3 1257 aa31.46■■■□□ 2.63
RAB40C-204ENST00000538492 ZBTB7BO15156 539 aaPredicted RBP31.46■■■□□ 2.63
RAB40C-204ENST00000538492 C1orf115Q9H7X2 142 aa31.46■■■□□ 2.63
RAB40C-204ENST00000538492 PTCH1Q13635 1447 aa31.45■■■□□ 2.63
RAB40C-204ENST00000538492 PEAK1Q9H792 1746 aa31.43■■■□□ 2.62
RAB40C-204ENST00000538492 BECN1Q14457 450 aa31.42■■■□□ 2.62
RAB40C-204ENST00000538492 LNPKQ9C0E8 428 aa31.42■■■□□ 2.62
RAB40C-204ENST00000538492 NUCB1Q02818 461 aa31.41■■■□□ 2.62
RAB40C-204ENST00000538492 MCM10Q7L590 875 aa31.41■■■□□ 2.62
RAB40C-204ENST00000538492 PIK3R4Q99570 1358 aa31.4■■■□□ 2.62
RAB40C-204ENST00000538492 NALCNQ8IZF0 1738 aa31.4■■■□□ 2.62
RAB40C-204ENST00000538492 ABCC4O15439 1325 aa31.39■■■□□ 2.62
RAB40C-204ENST00000538492 TBX22Q9Y458 520 aa31.39■■■□□ 2.62
RAB40C-204ENST00000538492 SLIT1O75093 1534 aa31.39■■■□□ 2.62
RAB40C-204ENST00000538492 KRT24Q2M2I5 525 aa31.38■■■□□ 2.61
RAB40C-204ENST00000538492 MFAP1P55081 439 aaKnown RBP31.38■■■□□ 2.61
RAB40C-204ENST00000538492 ARHGAP23Q9P227 1491 aa31.38■■■□□ 2.61
RAB40C-204ENST00000538492 RGPD8O14715 1765 aaPredicted RBP31.38■■■□□ 2.61
RAB40C-204ENST00000538492 SSH2Q76I76 1423 aa31.38■■■□□ 2.61
RAB40C-204ENST00000538492 USP31Q70CQ4 1352 aa31.37■■■□□ 2.61
RAB40C-204ENST00000538492 NGDNQ8NEJ9 315 aaKnown RBP31.37■■■□□ 2.61
RAB40C-204ENST00000538492 CHD1LQ86WJ1 897 aa31.37■■■□□ 2.61
RAB40C-204ENST00000538492 CHMP4BQ9H444 224 aaKnown RBP31.35■■■□□ 2.61
RAB40C-204ENST00000538492 MAP3K19Q56UN5 1328 aa31.35■■■□□ 2.61
RAB40C-204ENST00000538492 FER1L4A9Z1Z3 1794 aa31.35■■■□□ 2.61
RAB40C-204ENST00000538492 FRAT2O75474 233 aaPredicted RBP31.34■■■□□ 2.61
RAB40C-204ENST00000538492 THEMISQ8N1K5 641 aaPredicted RBP31.34■■■□□ 2.61
RAB40C-204ENST00000538492 SLKQ9H2G2 1235 aaPredicted RBP31.34■■■□□ 2.61
RAB40C-204ENST00000538492 API5Q9BZZ5 524 aaKnown RBP31.33■■■□□ 2.61
RAB40C-204ENST00000538492 ANKRD45Q5TZF3 282 aa31.33■■■□□ 2.61
RAB40C-204ENST00000538492 TTC21AQ8NDW8 1320 aa31.32■■■□□ 2.6
RAB40C-204ENST00000538492 DIP2AQ14689 1571 aa31.32■■■□□ 2.6
RAB40C-204ENST00000538492 RGPD1P0DJD0 1748 aa31.32■■■□□ 2.6
RAB40C-204ENST00000538492 SIRT2Q8IXJ6 389 aa31.31■■■□□ 2.6
RAB40C-204ENST00000538492 C22orf23Q9BZE7 217 aa31.31■■■□□ 2.6
RAB40C-204ENST00000538492 CHL1O00533 1208 aa31.31■■■□□ 2.6
RAB40C-204ENST00000538492 TBC1D2Q9BYX2 928 aa31.3■■■□□ 2.6
RAB40C-204ENST00000538492 GCC1Q96CN9 775 aa31.29■■■□□ 2.6
RAB40C-204ENST00000538492 FOXO3O43524 673 aa31.28■■■□□ 2.6
RAB40C-204ENST00000538492 FMN2Q9NZ56 1722 aa31.27■■■□□ 2.6
RAB40C-204ENST00000538492 RIMS1Q86UR5 1692 aaKnown RBP31.26■■■□□ 2.6
RAB40C-204ENST00000538492 MIS18AQ9NYP9 233 aa31.26■■■□□ 2.6
RAB40C-204ENST00000538492 AMPHP49418 695 aa31.26■■■□□ 2.59
RAB40C-204ENST00000538492 FLT4P35916 1363 aa31.25■■■□□ 2.59
RAB40C-204ENST00000538492 KCNA6P17658 529 aa31.25■■■□□ 2.59
RAB40C-204ENST00000538492 SBNO1A3KN83 1393 aa31.24■■■□□ 2.59
RAB40C-204ENST00000538492 ARHGEF10O15013 1369 aa31.24■■■□□ 2.59
RAB40C-204ENST00000538492 MTHFSDQ2M296 383 aaKnown RBP31.24■■■□□ 2.59
RAB40C-204ENST00000538492 NUTM2GQ5VZR2 741 aa31.24■■■□□ 2.59
RAB40C-204ENST00000538492 NLRP6P59044 892 aa31.22■■■□□ 2.59
RAB40C-204ENST00000538492 PIK3C2AO00443 1686 aa31.22■■■□□ 2.59
RAB40C-204ENST00000538492 CRB1P82279 1406 aa31.21■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms