RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 CYP46A1Q9Y6A2 500 aa20.01■□□□□ 0.79
SCARB1-205ENST00000538291 SOGA3Q5TF21 947 aa20.01■□□□□ 0.79
SCARB1-205ENST00000538291 ANKRD1Q15327 319 aa20■□□□□ 0.79
SCARB1-205ENST00000538291 CDCA7LQ96GN5 454 aa20■□□□□ 0.79
SCARB1-205ENST00000538291 TRIM5Q9C035 493 aa20■□□□□ 0.79
SCARB1-205ENST00000538291 CCDC69A6NI79 296 aa20■□□□□ 0.79
SCARB1-205ENST00000538291 CT47B1P0C2W7 299 aaPredicted RBP19.99■□□□□ 0.79
SCARB1-205ENST00000538291 RPGRIP1LQ68CZ1 1315 aa19.99■□□□□ 0.79
SCARB1-205ENST00000538291 SMC2O95347 1197 aa19.99■□□□□ 0.79
SCARB1-205ENST00000538291 C9orf84Q5VXU9 1444 aa19.99■□□□□ 0.79
SCARB1-205ENST00000538291 PIP4K2BP78356 416 aa19.98■□□□□ 0.79
SCARB1-205ENST00000538291 CCDC39Q9UFE4 941 aa19.98■□□□□ 0.79
SCARB1-205ENST00000538291 FMNL2Q96PY5 1086 aa19.98■□□□□ 0.79
SCARB1-205ENST00000538291 CEP126Q9P2H0 1117 aa19.98■□□□□ 0.79
SCARB1-205ENST00000538291 TTLL5Q6EMB2 1281 aa19.98■□□□□ 0.79
SCARB1-205ENST00000538291 KIF21BO75037 1637 aa19.97■□□□□ 0.79
SCARB1-205ENST00000538291 RNF214Q8ND24 703 aa19.97■□□□□ 0.79
SCARB1-205ENST00000538291 FAM43AQ8N2R8 423 aa19.97■□□□□ 0.79
SCARB1-205ENST00000538291 BTBD11A6QL63 1104 aa19.96■□□□□ 0.79
SCARB1-205ENST00000538291 ZSCAN29Q8IWY8 852 aaPredicted RBP19.96■□□□□ 0.79
SCARB1-205ENST00000538291 WDR63Q8IWG1 891 aa19.96■□□□□ 0.79
SCARB1-205ENST00000538291 STK11IPQ8N1F8 1099 aa19.96■□□□□ 0.79
SCARB1-205ENST00000538291 ATAD2Q6PL18 1390 aa19.96■□□□□ 0.79
SCARB1-205ENST00000538291 NASPP49321 788 aaPredicted RBP19.96■□□□□ 0.79
SCARB1-205ENST00000538291 PDCL3Q9H2J4 239 aa19.96■□□□□ 0.79
SCARB1-205ENST00000538291 BRPF1P55201 1214 aaPredicted RBP19.96■□□□□ 0.79
SCARB1-205ENST00000538291 FKBP4Q02790 459 aaKnown RBP eCLIP19.96■□□□□ 0.79
SCARB1-205ENST00000538291 NUP133Q8WUM0 1156 aa19.95■□□□□ 0.78
SCARB1-205ENST00000538291 ERCC4Q92889 916 aaPredicted RBP19.95■□□□□ 0.78
SCARB1-205ENST00000538291 ERICH3Q5RHP9 1530 aa19.95■□□□□ 0.78
SCARB1-205ENST00000538291 FIBPO43427 364 aa19.95■□□□□ 0.78
SCARB1-205ENST00000538291 CEBPZQ03701 1054 aaKnown RBP19.95■□□□□ 0.78
SCARB1-205ENST00000538291 STIM1Q13586 685 aa19.95■□□□□ 0.78
SCARB1-205ENST00000538291 FAM13BQ9NYF5 915 aa19.95■□□□□ 0.78
SCARB1-205ENST00000538291 RAPGEF3O95398 923 aa19.95■□□□□ 0.78
SCARB1-205ENST00000538291 AEBP1Q8IUX7 1158 aa19.95■□□□□ 0.78
SCARB1-205ENST00000538291 KIAA1107Q9UPP5 1409 aa19.94■□□□□ 0.78
SCARB1-205ENST00000538291 MRE11P49959 708 aa19.94■□□□□ 0.78
SCARB1-205ENST00000538291 ZNHIT6Q9NWK9 470 aaKnown RBP19.94■□□□□ 0.78
SCARB1-205ENST00000538291 AACSQ86V21 672 aa19.94■□□□□ 0.78
SCARB1-205ENST00000538291 ZHX3Q9H4I2 956 aa19.94■□□□□ 0.78
SCARB1-205ENST00000538291 NOL7Q9UMY1 257 aaKnown RBP19.94■□□□□ 0.78
SCARB1-205ENST00000538291 CCP110O43303 1012 aa19.94■□□□□ 0.78
SCARB1-205ENST00000538291 CTNNA3Q9UI47 895 aa19.94■□□□□ 0.78
SCARB1-205ENST00000538291 IGHMBP2P38935 993 aaKnown RBP19.94■□□□□ 0.78
SCARB1-205ENST00000538291 CAVIN1Q6NZI2 390 aaKnown RBP19.93■□□□□ 0.78
SCARB1-205ENST00000538291 RAI14Q9P0K7 980 aa19.93■□□□□ 0.78
SCARB1-205ENST00000538291 SRGAP3O43295 1099 aa19.93■□□□□ 0.78
SCARB1-205ENST00000538291 CC2D2AQ9P2K1 1620 aa19.93■□□□□ 0.78
SCARB1-205ENST00000538291 STARD3NLO95772 234 aa19.93■□□□□ 0.78
SCARB1-205ENST00000538291 TDO2P48775 406 aa19.93■□□□□ 0.78
SCARB1-205ENST00000538291 STK3Q13188 491 aa19.92■□□□□ 0.78
SCARB1-205ENST00000538291 KCNH5Q8NCM2 988 aa19.92■□□□□ 0.78
SCARB1-205ENST00000538291 CDKL5O76039 1030 aa19.92■□□□□ 0.78
SCARB1-205ENST00000538291 ATF7IPQ6VMQ6 1270 aa19.92■□□□□ 0.78
SCARB1-205ENST00000538291 ZNF428Q96B54 188 aa19.92■□□□□ 0.78
SCARB1-205ENST00000538291 UBAC1Q9BSL1 405 aa19.92■□□□□ 0.78
SCARB1-205ENST00000538291 DACH1Q9UI36 760 aa19.92■□□□□ 0.78
SCARB1-205ENST00000538291 PRPF40AO75400 957 aaKnown RBP19.92■□□□□ 0.78
SCARB1-205ENST00000538291 TSPY26PQ9H489 355 aa19.92■□□□□ 0.78
SCARB1-205ENST00000538291 ANKRD30BQ9BXX2 1392 aa19.92■□□□□ 0.78
SCARB1-205ENST00000538291 ZC3H6P61129 1189 aaKnown RBP19.92■□□□□ 0.78
SCARB1-205ENST00000538291 BICDL1Q6ZP65 573 aa19.92■□□□□ 0.78
SCARB1-205ENST00000538291 RRS1Q15050 365 aaKnown RBP19.91■□□□□ 0.78
SCARB1-205ENST00000538291 LUC7LQ9NQ29 371 aaKnown RBP19.91■□□□□ 0.78
SCARB1-205ENST00000538291 TMOD2Q9NZR1 351 aa19.91■□□□□ 0.78
SCARB1-205ENST00000538291 XPCQ01831 940 aaPredicted RBP19.91■□□□□ 0.78
SCARB1-205ENST00000538291 ERBINQ96RT1 1412 aa19.91■□□□□ 0.78
SCARB1-205ENST00000538291 DCTN1Q14203 1278 aa19.91■□□□□ 0.78
SCARB1-205ENST00000538291 NFKBIBQ15653 356 aa19.91■□□□□ 0.78
SCARB1-205ENST00000538291 LRP2BPQ9P2M1 347 aa19.9■□□□□ 0.78
SCARB1-205ENST00000538291 ME1P48163 572 aa19.9■□□□□ 0.78
SCARB1-205ENST00000538291 BMP2KQ9NSY1 1161 aaPredicted RBP19.9■□□□□ 0.78
SCARB1-205ENST00000538291 BCAR3O75815 825 aa19.89■□□□□ 0.78
SCARB1-205ENST00000538291 FCHSD2O94868 740 aa19.89■□□□□ 0.78
SCARB1-205ENST00000538291 MPHOSPH10O00566 681 aaKnown RBP19.89■□□□□ 0.77
SCARB1-205ENST00000538291 TRAK2O60296 914 aa19.89■□□□□ 0.77
SCARB1-205ENST00000538291 BLOC1S2Q6QNY1 142 aa19.89■□□□□ 0.77
SCARB1-205ENST00000538291 EFCAB5A4FU69 1503 aa19.89■□□□□ 0.77
SCARB1-205ENST00000538291 MAP4K4O95819 1239 aaPredicted RBP19.89■□□□□ 0.77
SCARB1-205ENST00000538291 TROQ12816 1431 aaPredicted RBP19.88■□□□□ 0.77
SCARB1-205ENST00000538291 SERPINC1P01008 464 aa19.88■□□□□ 0.77
SCARB1-205ENST00000538291 CCDC61Q9Y6R9 512 aa19.88■□□□□ 0.77
SCARB1-205ENST00000538291 DHX8Q14562 1220 aaKnown RBP19.88■□□□□ 0.77
SCARB1-205ENST00000538291 ZNF652Q9Y2D9 606 aa19.88■□□□□ 0.77
SCARB1-205ENST00000538291 WDR33Q9C0J8 1336 aaKnown RBP19.88■□□□□ 0.77
SCARB1-205ENST00000538291 TANGO6Q9C0B7 1094 aa19.87■□□□□ 0.77
SCARB1-205ENST00000538291 GNAT3A8MTJ3 354 aa19.87■□□□□ 0.77
SCARB1-205ENST00000538291 KRT85P78386 507 aa19.87■□□□□ 0.77
SCARB1-205ENST00000538291 NUDT16Q96DE0 195 aaKnown RBP19.87■□□□□ 0.77
SCARB1-205ENST00000538291 MVPQ14764 893 aaKnown RBP19.87■□□□□ 0.77
SCARB1-205ENST00000538291 KRT32Q14532 448 aa19.86■□□□□ 0.77
SCARB1-205ENST00000538291 LARP1BQ659C4 914 aaKnown RBP19.86■□□□□ 0.77
SCARB1-205ENST00000538291 PPFIBP1Q86W92 1011 aa19.86■□□□□ 0.77
SCARB1-205ENST00000538291 TXLNBQ8N3L3 684 aa19.86■□□□□ 0.77
SCARB1-205ENST00000538291 ZNF76P36508 570 aa19.86■□□□□ 0.77
SCARB1-205ENST00000538291 DEF6Q9H4E7 631 aa19.86■□□□□ 0.77
SCARB1-205ENST00000538291 IDH1O75874 414 aaKnown RBP19.85■□□□□ 0.77
SCARB1-205ENST00000538291 EHBP1L1Q8N3D4 1523 aa19.85■□□□□ 0.77
SCARB1-205ENST00000538291 SSBP05455 408 aaKnown RBP eCLIP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms