RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 BACH2Q9BYV9 841 aa12.02□□□□□ -0.49
DDB1-211ENST00000538280 USP21Q9UK80 565 aa12.02□□□□□ -0.49
DDB1-211ENST00000538280 CPSF1Q10570 1443 aaKnown RBP12.02□□□□□ -0.49
DDB1-211ENST00000538280 PLCH1Q4KWH8 1693 aa12.01□□□□□ -0.49
DDB1-211ENST00000538280 PDE4AP27815 886 aa12.01□□□□□ -0.49
DDB1-211ENST00000538280 TNNT2P45379 298 aaPredicted RBP12.01□□□□□ -0.49
DDB1-211ENST00000538280 XPCQ01831 940 aaPredicted RBP12.01□□□□□ -0.49
DDB1-211ENST00000538280 PLEKHF1Q96S99 279 aa12.01□□□□□ -0.49
DDB1-211ENST00000538280 TOPAZ1Q8N9V7 1692 aa12□□□□□ -0.49
DDB1-211ENST00000538280 BCAR3O75815 825 aa12□□□□□ -0.49
DDB1-211ENST00000538280 HDGFL2Q7Z4V5 671 aaPredicted RBP12□□□□□ -0.49
DDB1-211ENST00000538280 NRKQ7Z2Y5 1582 aa12□□□□□ -0.49
DDB1-211ENST00000538280 ITSN1Q15811 1721 aa12□□□□□ -0.49
DDB1-211ENST00000538280 VIRMAQ69YN4 1812 aaKnown RBP12□□□□□ -0.49
DDB1-211ENST00000538280 FNBP4Q8N3X1 1017 aaPredicted RBP11.99□□□□□ -0.49
DDB1-211ENST00000538280 TRPC5Q9UL62 973 aaPredicted RBP11.99□□□□□ -0.49
DDB1-211ENST00000538280 EDC4Q6P2E9 1401 aaKnown RBP11.99□□□□□ -0.49
DDB1-211ENST00000538280 ANP32AP39687 249 aaKnown RBP11.98□□□□□ -0.49
DDB1-211ENST00000538280 AAMPQ13685 434 aa11.98□□□□□ -0.49
DDB1-211ENST00000538280 IPO9Q96P70 1041 aaKnown RBP11.98□□□□□ -0.49
DDB1-211ENST00000538280 GGNBP2Q9H3C7 697 aa11.98□□□□□ -0.49
DDB1-211ENST00000538280 NOP58Q9Y2X3 529 aaKnown RBP11.98□□□□□ -0.49
DDB1-211ENST00000538280 KIF1AQ12756 1690 aa11.97□□□□□ -0.49
DDB1-211ENST00000538280 IL16Q14005 1332 aa11.97□□□□□ -0.49
DDB1-211ENST00000538280 CT47B1P0C2W7 299 aaPredicted RBP11.97□□□□□ -0.49
DDB1-211ENST00000538280 RARSP54136 660 aaKnown RBP11.97□□□□□ -0.49
DDB1-211ENST00000538280 RRP7AQ9Y3A4 280 aaKnown RBP11.97□□□□□ -0.49
DDB1-211ENST00000538280 AATKQ6ZMQ8 1374 aa11.96□□□□□ -0.49
DDB1-211ENST00000538280 NUTM2FA1L443 756 aa11.96□□□□□ -0.49
DDB1-211ENST00000538280 U2AF1L5P0DN76 240 aaPredicted RBP11.96□□□□□ -0.49
DDB1-211ENST00000538280 U2AF1Q01081 240 aaKnown RBP eCLIP11.96□□□□□ -0.49
DDB1-211ENST00000538280 ERICH6Q7L0X2 663 aa11.96□□□□□ -0.49
DDB1-211ENST00000538280 MYH16Q9H6N6 1097 aa11.96□□□□□ -0.49
DDB1-211ENST00000538280 CABP1Q9NZU7 370 aa11.96□□□□□ -0.49
DDB1-211ENST00000538280 SLIT2O94813 1529 aa11.96□□□□□ -0.5
DDB1-211ENST00000538280 PPIP5K1Q6PFW1 1433 aa11.95□□□□□ -0.5
DDB1-211ENST00000538280 MAP2P11137 1827 aaKnown RBP11.95□□□□□ -0.5
DDB1-211ENST00000538280 WASLO00401 505 aaPredicted RBP11.95□□□□□ -0.5
DDB1-211ENST00000538280 TMPOP42166 694 aaKnown RBP11.95□□□□□ -0.5
DDB1-211ENST00000538280 WAPLQ7Z5K2 1190 aa11.95□□□□□ -0.5
DDB1-211ENST00000538280 TRIM35Q9UPQ4 493 aa11.95□□□□□ -0.5
DDB1-211ENST00000538280 NRAPQ86VF7 1730 aa11.94□□□□□ -0.5
DDB1-211ENST00000538280 FOXO3O43524 673 aa11.94□□□□□ -0.5
DDB1-211ENST00000538280 ESCO1Q5FWF5 840 aa11.94□□□□□ -0.5
DDB1-211ENST00000538280 NPHP3Q7Z494 1330 aa11.93□□□□□ -0.5
DDB1-211ENST00000538280 DIAPH1O60610 1272 aaKnown RBP11.93□□□□□ -0.5
DDB1-211ENST00000538280 CLUAP1Q96AJ1 413 aa11.93□□□□□ -0.5
DDB1-211ENST00000538280 NWD2Q9ULI1 1742 aa11.93□□□□□ -0.5
DDB1-211ENST00000538280 LRP5O75197 1615 aa11.93□□□□□ -0.5
DDB1-211ENST00000538280 PAK3O75914 559 aaPredicted RBP11.92□□□□□ -0.5
DDB1-211ENST00000538280 NEUROD2Q15784 382 aa11.92□□□□□ -0.5
DDB1-211ENST00000538280 PNNQ9H307 717 aaKnown RBP11.92□□□□□ -0.5
DDB1-211ENST00000538280 DEFB132Q7Z7B7 95 aa11.91□□□□□ -0.5
DDB1-211ENST00000538280 SKAP1Q86WV1 359 aa11.91□□□□□ -0.5
DDB1-211ENST00000538280 GJD4Q96KN9 370 aaPredicted RBP11.91□□□□□ -0.5
DDB1-211ENST00000538280 RSPH6AQ9H0K4 717 aa11.91□□□□□ -0.5
DDB1-211ENST00000538280 POLKQ9UBT6 870 aa11.91□□□□□ -0.5
DDB1-211ENST00000538280 TRPM3Q9HCF6 1732 aaPredicted RBP11.91□□□□□ -0.5
DDB1-211ENST00000538280 CRYBG1Q9Y4K1 1723 aa11.91□□□□□ -0.5
DDB1-211ENST00000538280 MAPK8IP3Q9UPT6 1336 aa11.9□□□□□ -0.5
DDB1-211ENST00000538280 FCHSD2O94868 740 aa11.9□□□□□ -0.5
DDB1-211ENST00000538280 IGHDP01880 384 aa11.9□□□□□ -0.5
DDB1-211ENST00000538280 FAM161AQ3B820 660 aa11.9□□□□□ -0.5
DDB1-211ENST00000538280 C8orf34Q49A92 452 aa11.9□□□□□ -0.5
DDB1-211ENST00000538280 PANK1Q8TE04 598 aa11.9□□□□□ -0.5
DDB1-211ENST00000538280 ZRANB1Q9UGI0 708 aa11.9□□□□□ -0.5
DDB1-211ENST00000538280 PRR36Q9H6K5 1346 aa11.89□□□□□ -0.51
DDB1-211ENST00000538280 U2SURPO15042 1029 aaKnown RBP11.89□□□□□ -0.51
DDB1-211ENST00000538280 NUDT16Q96DE0 195 aaKnown RBP11.89□□□□□ -0.51
DDB1-211ENST00000538280 COG6Q9Y2V7 657 aa11.89□□□□□ -0.51
DDB1-211ENST00000538280 RGPD1P0DJD0 1748 aa11.89□□□□□ -0.51
DDB1-211ENST00000538280 TNS1Q9HBL0 1735 aaKnown RBP11.89□□□□□ -0.51
DDB1-211ENST00000538280 SPATA31A3Q5VYP0 1347 aa11.88□□□□□ -0.51
DDB1-211ENST00000538280 TNS3Q68CZ2 1445 aa11.88□□□□□ -0.51
DDB1-211ENST00000538280 PLEKHG5O94827 1062 aa11.88□□□□□ -0.51
DDB1-211ENST00000538280 RLBP1P12271 317 aa11.88□□□□□ -0.51
DDB1-211ENST00000538280 CANXP27824 592 aaKnown RBP11.88□□□□□ -0.51
DDB1-211ENST00000538280 ZBTB47Q9UFB7 747 aaPredicted RBP11.88□□□□□ -0.51
DDB1-211ENST00000538280 CCDC61Q9Y6R9 512 aa11.88□□□□□ -0.51
DDB1-211ENST00000538280 ALS2Q96Q42 1657 aa11.87□□□□□ -0.51
DDB1-211ENST00000538280 OVOS2A0A0J9YW53 1432 aa11.87□□□□□ -0.51
DDB1-211ENST00000538280 OVOS2Q6IE36 1432 aa11.87□□□□□ -0.51
DDB1-211ENST00000538280 IL13P35225 146 aa11.87□□□□□ -0.51
DDB1-211ENST00000538280 UNC5CLQ8IV45 518 aa11.87□□□□□ -0.51
DDB1-211ENST00000538280 PMFBP1Q8TBY8 1022 aa11.87□□□□□ -0.51
DDB1-211ENST00000538280 CABLES1Q8TDN4 633 aa11.87□□□□□ -0.51
DDB1-211ENST00000538280 TNNQ9UQP3 1299 aa11.87□□□□□ -0.51
DDB1-211ENST00000538280 DLG5Q8TDM6 1919 aa11.87□□□□□ -0.51
DDB1-211ENST00000538280 USP54Q70EL1 1684 aa11.87□□□□□ -0.51
DDB1-211ENST00000538280 SSH2Q76I76 1423 aa11.86□□□□□ -0.51
DDB1-211ENST00000538280 RIPK4P57078 832 aa11.86□□□□□ -0.51
DDB1-211ENST00000538280 EXOSC9Q06265 439 aaKnown RBP11.86□□□□□ -0.51
DDB1-211ENST00000538280 MVPQ14764 893 aaKnown RBP11.86□□□□□ -0.51
DDB1-211ENST00000538280 ZKSCAN2Q63HK3 967 aa11.86□□□□□ -0.51
DDB1-211ENST00000538280 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.86□□□□□ -0.51
DDB1-211ENST00000538280 ZNF692Q9BU19 519 aaPredicted RBP11.86□□□□□ -0.51
DDB1-211ENST00000538280 PLEKHG3A1L390 1219 aa11.85□□□□□ -0.51
DDB1-211ENST00000538280 BRPF1P55201 1214 aaPredicted RBP11.85□□□□□ -0.51
DDB1-211ENST00000538280 NFE2L2Q16236 605 aa11.85□□□□□ -0.51
DDB1-211ENST00000538280 NME9Q86XW9 330 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms