RNA–Protein interactions for RNA: ENST00000537796.2

NECAP1-203, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,418 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-203ENST00000537796 EIF4A2Q14240 407 aaKnown RBP9.43□□□□□ -0.9
NECAP1-203ENST00000537796 MAP2P11137 1827 aaKnown RBP9.43□□□□□ -0.9
NECAP1-203ENST00000537796 ADGRB2O60241 1585 aa9.43□□□□□ -0.9
NECAP1-203ENST00000537796 MRPL50Q8N5N7 158 aaKnown RBP9.43□□□□□ -0.9
NECAP1-203ENST00000537796 LTV1Q96GA3 475 aaPredicted RBP9.43□□□□□ -0.9
NECAP1-203ENST00000537796 ZBTB7CA1YPR0 619 aa9.42□□□□□ -0.9
NECAP1-203ENST00000537796 SIRT2Q8IXJ6 389 aa9.42□□□□□ -0.9
NECAP1-203ENST00000537796 TBC1D32Q96NH3 1257 aa9.42□□□□□ -0.9
NECAP1-203ENST00000537796 UPF2Q9HAU5 1272 aaKnown RBP9.42□□□□□ -0.9
NECAP1-203ENST00000537796 FAM135BQ49AJ0 1406 aa9.42□□□□□ -0.9
NECAP1-203ENST00000537796 IPO8O15397 1037 aaKnown RBP9.42□□□□□ -0.9
NECAP1-203ENST00000537796 C14orf37Q86TY3 774 aa9.42□□□□□ -0.9
NECAP1-203ENST00000537796 C16orf71Q8IYS4 520 aaPredicted RBP9.41□□□□□ -0.9
NECAP1-203ENST00000537796 ZBTB7BO15156 539 aaPredicted RBP9.41□□□□□ -0.9
NECAP1-203ENST00000537796 GSE1Q14687 1217 aa9.41□□□□□ -0.9
NECAP1-203ENST00000537796 C22orf23Q9BZE7 217 aa9.41□□□□□ -0.9
NECAP1-203ENST00000537796 PNNQ9H307 717 aaKnown RBP9.41□□□□□ -0.9
NECAP1-203ENST00000537796 TTC21BQ7Z4L5 1316 aa9.41□□□□□ -0.9
NECAP1-203ENST00000537796 KIF16BQ96L93 1317 aa9.41□□□□□ -0.9
NECAP1-203ENST00000537796 TNRQ92752 1358 aa9.41□□□□□ -0.9
NECAP1-203ENST00000537796 GNAI1P63096 354 aa9.4□□□□□ -0.9
NECAP1-203ENST00000537796 HDAC1Q13547 482 aaPredicted RBP9.4□□□□□ -0.9
NECAP1-203ENST00000537796 SMC5Q8IY18 1101 aa9.4□□□□□ -0.9
NECAP1-203ENST00000537796 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.4□□□□□ -0.9
NECAP1-203ENST00000537796 GZF1Q9H116 711 aaPredicted RBP9.4□□□□□ -0.9
NECAP1-203ENST00000537796 AMOTL2Q9Y2J4 779 aa9.4□□□□□ -0.9
NECAP1-203ENST00000537796 IL16Q14005 1332 aa9.4□□□□□ -0.9
NECAP1-203ENST00000537796 CPSF1Q10570 1443 aaKnown RBP9.4□□□□□ -0.91
NECAP1-203ENST00000537796 SMARCA5O60264 1052 aaPredicted RBP9.4□□□□□ -0.91
NECAP1-203ENST00000537796 CHD1LQ86WJ1 897 aa9.4□□□□□ -0.91
NECAP1-203ENST00000537796 OTUD7AQ8TE49 926 aaPredicted RBP9.4□□□□□ -0.91
NECAP1-203ENST00000537796 RBM42Q9BTD8 480 aaKnown RBP9.4□□□□□ -0.91
NECAP1-203ENST00000537796 MED14O60244 1454 aa9.39□□□□□ -0.91
NECAP1-203ENST00000537796 EDC4Q6P2E9 1401 aaKnown RBP9.39□□□□□ -0.91
NECAP1-203ENST00000537796 F6X3S4 739 aa9.39□□□□□ -0.91
NECAP1-203ENST00000537796 NGDNQ8NEJ9 315 aaKnown RBP9.39□□□□□ -0.91
NECAP1-203ENST00000537796 USP35Q9P2H5 1018 aa9.39□□□□□ -0.91
NECAP1-203ENST00000537796 CT47B1P0C2W7 299 aaPredicted RBP9.39□□□□□ -0.91
NECAP1-203ENST00000537796 BECN1Q14457 450 aa9.39□□□□□ -0.91
NECAP1-203ENST00000537796 SLC4A10Q6U841 1118 aa9.39□□□□□ -0.91
NECAP1-203ENST00000537796 USHBP1Q8N6Y0 703 aa9.39□□□□□ -0.91
NECAP1-203ENST00000537796 ZNF428Q96B54 188 aa9.38□□□□□ -0.91
NECAP1-203ENST00000537796 CFAP44Q96MT7 982 aa9.38□□□□□ -0.91
NECAP1-203ENST00000537796 IFT57Q9NWB7 429 aa9.38□□□□□ -0.91
NECAP1-203ENST00000537796 NUCB1Q02818 461 aa9.38□□□□□ -0.91
NECAP1-203ENST00000537796 G2E3Q7L622 706 aa9.38□□□□□ -0.91
NECAP1-203ENST00000537796 TMEM2Q9UHN6 1383 aa9.38□□□□□ -0.91
NECAP1-203ENST00000537796 ZNF853P0CG23 659 aa9.38□□□□□ -0.91
NECAP1-203ENST00000537796 ALDH1L2Q3SY69 923 aa9.38□□□□□ -0.91
NECAP1-203ENST00000537796 NRXN3Q9Y4C0 1643 aa9.38□□□□□ -0.91
NECAP1-203ENST00000537796 KIF20BQ96Q89 1820 aa9.38□□□□□ -0.91
NECAP1-203ENST00000537796 ATP7BP35670 1465 aa9.37□□□□□ -0.91
NECAP1-203ENST00000537796 SPATA31D1Q6ZQQ2 1576 aa9.37□□□□□ -0.91
NECAP1-203ENST00000537796 MAP3K19Q56UN5 1328 aa9.37□□□□□ -0.91
NECAP1-203ENST00000537796 MTHFSDQ2M296 383 aaKnown RBP9.37□□□□□ -0.91
NECAP1-203ENST00000537796 CD2BP2O95400 341 aaKnown RBP9.36□□□□□ -0.91
NECAP1-203ENST00000537796 AMPHP49418 695 aa9.36□□□□□ -0.91
NECAP1-203ENST00000537796 TSHZ3Q63HK5 1081 aa9.36□□□□□ -0.91
NECAP1-203ENST00000537796 PTPRUQ92729 1446 aa9.36□□□□□ -0.91
NECAP1-203ENST00000537796 SLC4A2P04920 1241 aa9.36□□□□□ -0.91
NECAP1-203ENST00000537796 HDGFP51858 240 aaKnown RBP9.36□□□□□ -0.91
NECAP1-203ENST00000537796 NLRP6P59044 892 aa9.36□□□□□ -0.91
NECAP1-203ENST00000537796 MEIS3Q99687 375 aa9.36□□□□□ -0.91
NECAP1-203ENST00000537796 PPP6R1Q9UPN7 881 aa9.36□□□□□ -0.91
NECAP1-203ENST00000537796 XPCQ01831 940 aaPredicted RBP9.35□□□□□ -0.91
NECAP1-203ENST00000537796 ANTXR1Q9H6X2 564 aa9.35□□□□□ -0.91
NECAP1-203ENST00000537796 ADAMTS13Q76LX8 1427 aa9.35□□□□□ -0.91
NECAP1-203ENST00000537796 TRHP20396 242 aaPredicted RBP9.35□□□□□ -0.91
NECAP1-203ENST00000537796 ZNF692Q9BU19 519 aaPredicted RBP9.35□□□□□ -0.91
NECAP1-203ENST00000537796 AAMPQ13685 434 aa9.35□□□□□ -0.91
NECAP1-203ENST00000537796 SETD1AO15047 1707 aaKnown RBP9.35□□□□□ -0.91
NECAP1-203ENST00000537796 ANKRD26Q9UPS8 1709 aa9.35□□□□□ -0.91
NECAP1-203ENST00000537796 EID1Q9Y6B2 187 aa9.34□□□□□ -0.91
NECAP1-203ENST00000537796 DLC1Q96QB1 1528 aa9.34□□□□□ -0.91
NECAP1-203ENST00000537796 KCNA6P17658 529 aa9.34□□□□□ -0.91
NECAP1-203ENST00000537796 NCBP3Q53F19 620 aaKnown RBP9.34□□□□□ -0.91
NECAP1-203ENST00000537796 TBC1D9Q6ZT07 1266 aa9.34□□□□□ -0.91
NECAP1-203ENST00000537796 EYA1Q99502 592 aa9.34□□□□□ -0.91
NECAP1-203ENST00000537796 TSPYL4Q9UJ04 414 aa9.34□□□□□ -0.91
NECAP1-203ENST00000537796 AGLP35573 1532 aa9.33□□□□□ -0.92
NECAP1-203ENST00000537796 CALD1Q05682 793 aaKnown RBP9.33□□□□□ -0.92
NECAP1-203ENST00000537796 ABCC4O15439 1325 aa9.33□□□□□ -0.92
NECAP1-203ENST00000537796 GSPT1P15170 499 aaKnown RBP9.33□□□□□ -0.92
NECAP1-203ENST00000537796 CDK12Q9NYV4 1490 aaPredicted RBP9.33□□□□□ -0.92
NECAP1-203ENST00000537796 DLG5Q8TDM6 1919 aa9.32□□□□□ -0.92
NECAP1-203ENST00000537796 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.32□□□□□ -0.92
NECAP1-203ENST00000537796 LMOD3Q0VAK6 560 aa9.32□□□□□ -0.92
NECAP1-203ENST00000537796 AATKQ6ZMQ8 1374 aa9.32□□□□□ -0.92
NECAP1-203ENST00000537796 CDC42BPGQ6DT37 1551 aa9.32□□□□□ -0.92
NECAP1-203ENST00000537796 CHL1O00533 1208 aa9.32□□□□□ -0.92
NECAP1-203ENST00000537796 LMOD2Q6P5Q4 547 aa9.32□□□□□ -0.92
NECAP1-203ENST00000537796 RTF1Q92541 710 aaKnown RBP9.32□□□□□ -0.92
NECAP1-203ENST00000537796 API5Q9BZZ5 524 aaKnown RBP9.32□□□□□ -0.92
NECAP1-203ENST00000537796 MSH6P52701 1360 aa9.32□□□□□ -0.92
NECAP1-203ENST00000537796 SETD1BQ9UPS6 1966 aaKnown RBP9.31□□□□□ -0.92
NECAP1-203ENST00000537796 RIMS1Q86UR5 1692 aaKnown RBP9.31□□□□□ -0.92
NECAP1-203ENST00000537796 ABTB2Q8N961 1025 aa9.31□□□□□ -0.92
NECAP1-203ENST00000537796 HSCBQ8IWL3 235 aa9.31□□□□□ -0.92
NECAP1-203ENST00000537796 EXOC6BQ9Y2D4 811 aa9.31□□□□□ -0.92
NECAP1-203ENST00000537796 USP6P35125 1406 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms