RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 CHMP4BQ9H444 224 aaKnown RBP17.39■□□□□ 0.37
SMG6-203ENST00000536871 SMC4Q9NTJ3 1288 aa17.39■□□□□ 0.37
SMG6-203ENST00000536871 RRS1Q15050 365 aaKnown RBP17.38■□□□□ 0.37
SMG6-203ENST00000536871 PLPPR3Q6T4P5 718 aa17.38■□□□□ 0.37
SMG6-203ENST00000536871 FTSJ3Q8IY81 847 aaKnown RBP17.38■□□□□ 0.37
SMG6-203ENST00000536871 DZIP1LQ8IYY4 767 aaKnown RBP17.38■□□□□ 0.37
SMG6-203ENST00000536871 ZRANB1Q9UGI0 708 aa17.38■□□□□ 0.37
SMG6-203ENST00000536871 COG6Q9Y2V7 657 aa17.38■□□□□ 0.37
SMG6-203ENST00000536871 PANK1Q8TE04 598 aa17.37■□□□□ 0.37
SMG6-203ENST00000536871 TSR2Q969E8 191 aaKnown RBP17.37■□□□□ 0.37
SMG6-203ENST00000536871 HMOX1P09601 288 aa17.37■□□□□ 0.37
SMG6-203ENST00000536871 KCNA6P17658 529 aa17.37■□□□□ 0.37
SMG6-203ENST00000536871 MVPQ14764 893 aaKnown RBP17.37■□□□□ 0.37
SMG6-203ENST00000536871 SBNO1A3KN83 1393 aa17.36■□□□□ 0.37
SMG6-203ENST00000536871 FMN2Q9NZ56 1722 aa17.36■□□□□ 0.37
SMG6-203ENST00000536871 FBLN1P23142 703 aa17.35■□□□□ 0.37
SMG6-203ENST00000536871 ATF7IPQ6VMQ6 1270 aa17.35■□□□□ 0.37
SMG6-203ENST00000536871 DDX19BQ9UMR2 479 aa17.35■□□□□ 0.37
SMG6-203ENST00000536871 SETD1BQ9UPS6 1966 aaKnown RBP17.35■□□□□ 0.37
SMG6-203ENST00000536871 ARHGEF10O15013 1369 aa17.35■□□□□ 0.37
SMG6-203ENST00000536871 FLT4P35916 1363 aa17.35■□□□□ 0.37
SMG6-203ENST00000536871 EIF4A2Q14240 407 aaKnown RBP17.35■□□□□ 0.37
SMG6-203ENST00000536871 PHACTR3Q96KR7 559 aa17.35■□□□□ 0.37
SMG6-203ENST00000536871 CFAP44Q96MT7 982 aa17.35■□□□□ 0.37
SMG6-203ENST00000536871 RWDD1Q9H446 243 aaPredicted RBP17.35■□□□□ 0.37
SMG6-203ENST00000536871 ZNF853P0CG23 659 aa17.34■□□□□ 0.37
SMG6-203ENST00000536871 ARHGAP45Q92619 1136 aa17.34■□□□□ 0.37
SMG6-203ENST00000536871 SSH1Q8WYL5 1049 aa17.33■□□□□ 0.37
SMG6-203ENST00000536871 USP54Q70EL1 1684 aa17.33■□□□□ 0.36
SMG6-203ENST00000536871 IPO9Q96P70 1041 aaKnown RBP17.33■□□□□ 0.36
SMG6-203ENST00000536871 NUTM2FA1L443 756 aa17.32■□□□□ 0.36
SMG6-203ENST00000536871 FAM161AQ3B820 660 aa17.32■□□□□ 0.36
SMG6-203ENST00000536871 CHD2O14647 1828 aaKnown RBP17.32■□□□□ 0.36
SMG6-203ENST00000536871 BCL2L13Q9BXK5 485 aa17.31■□□□□ 0.36
SMG6-203ENST00000536871 RLBP1P12271 317 aa17.3■□□□□ 0.36
SMG6-203ENST00000536871 TRIM27P14373 513 aa17.3■□□□□ 0.36
SMG6-203ENST00000536871 SULT6B1Q6IMI4 303 aa17.3■□□□□ 0.36
SMG6-203ENST00000536871 NPHP4O75161 1426 aaPredicted RBP17.3■□□□□ 0.36
SMG6-203ENST00000536871 ADGRL3Q9HAR2 1447 aa17.3■□□□□ 0.36
SMG6-203ENST00000536871 RGPD1P0DJD0 1748 aa17.29■□□□□ 0.36
SMG6-203ENST00000536871 MAP3K19Q56UN5 1328 aa17.29■□□□□ 0.36
SMG6-203ENST00000536871 MSH5O43196 834 aa17.29■□□□□ 0.36
SMG6-203ENST00000536871 RTL1A6NKG5 1358 aa17.28■□□□□ 0.36
SMG6-203ENST00000536871 KDRP35968 1356 aa17.28■□□□□ 0.36
SMG6-203ENST00000536871 AMPHP49418 695 aa17.28■□□□□ 0.36
SMG6-203ENST00000536871 NOB1Q9ULX3 412 aaKnown RBP17.28■□□□□ 0.36
SMG6-203ENST00000536871 VAMP4O75379 141 aa17.27■□□□□ 0.36
SMG6-203ENST00000536871 IGHDP01880 384 aa17.27■□□□□ 0.36
SMG6-203ENST00000536871 NLRP6P59044 892 aa17.27■□□□□ 0.36
SMG6-203ENST00000536871 DDRGK1Q96HY6 314 aa17.27■□□□□ 0.36
SMG6-203ENST00000536871 PHF8Q9UPP1 1060 aa17.27■□□□□ 0.36
SMG6-203ENST00000536871 NOP58Q9Y2X3 529 aaKnown RBP17.27■□□□□ 0.36
SMG6-203ENST00000536871 HTATSF1O43719 755 aaKnown RBP17.27■□□□□ 0.35
SMG6-203ENST00000536871 HSP90AB2PQ58FF8 381 aa17.27■□□□□ 0.35
SMG6-203ENST00000536871 LAS1LQ9Y4W2 734 aaKnown RBP17.27■□□□□ 0.35
SMG6-203ENST00000536871 PIK3C2AO00443 1686 aa17.26■□□□□ 0.35
SMG6-203ENST00000536871 PEAK1Q9H792 1746 aa17.26■□□□□ 0.35
SMG6-203ENST00000536871 HDAC1Q13547 482 aaPredicted RBP17.26■□□□□ 0.35
SMG6-203ENST00000536871 MBIPQ9NS73 344 aa17.26■□□□□ 0.35
SMG6-203ENST00000536871 KIAA0232Q92628 1395 aa17.25■□□□□ 0.35
SMG6-203ENST00000536871 GAS2L2Q8NHY3 880 aa17.25■□□□□ 0.35
SMG6-203ENST00000536871 IGSF1Q8N6C5 1336 aa17.25■□□□□ 0.35
SMG6-203ENST00000536871 ITPRIPQ8IWB1 547 aa17.24■□□□□ 0.35
SMG6-203ENST00000536871 ZBTB47Q9UFB7 747 aaPredicted RBP17.24■□□□□ 0.35
SMG6-203ENST00000536871 TWISTNBQ3B726 338 aaPredicted RBP17.24■□□□□ 0.35
SMG6-203ENST00000536871 API5Q9BZZ5 524 aaKnown RBP17.24■□□□□ 0.35
SMG6-203ENST00000536871 PCDHB15Q9Y5E8 787 aa17.24■□□□□ 0.35
SMG6-203ENST00000536871 NWD1Q149M9 1564 aa17.24■□□□□ 0.35
SMG6-203ENST00000536871 MRPL50Q8N5N7 158 aaKnown RBP17.23■□□□□ 0.35
SMG6-203ENST00000536871 ABTB2Q8N961 1025 aa17.23■□□□□ 0.35
SMG6-203ENST00000536871 CHL1O00533 1208 aa17.22■□□□□ 0.35
SMG6-203ENST00000536871 RGPD8O14715 1765 aaPredicted RBP17.22■□□□□ 0.35
SMG6-203ENST00000536871 RGS3P49796 1198 aa17.22■□□□□ 0.35
SMG6-203ENST00000536871 AEBP1Q8IUX7 1158 aa17.22■□□□□ 0.35
SMG6-203ENST00000536871 KCNH5Q8NCM2 988 aa17.22■□□□□ 0.35
SMG6-203ENST00000536871 RTF1Q92541 710 aaKnown RBP17.22■□□□□ 0.35
SMG6-203ENST00000536871 ZBTB40Q9NUA8 1239 aa17.21■□□□□ 0.35
SMG6-203ENST00000536871 DLG5Q8TDM6 1919 aa17.2■□□□□ 0.34
SMG6-203ENST00000536871 C8orf34Q49A92 452 aa17.2■□□□□ 0.34
SMG6-203ENST00000536871 TMEM57Q8N5G2 664 aa17.2■□□□□ 0.34
SMG6-203ENST00000536871 THUMPD2Q9BTF0 503 aaKnown RBP17.2■□□□□ 0.34
SMG6-203ENST00000536871 TNNQ9UQP3 1299 aa17.2■□□□□ 0.34
SMG6-203ENST00000536871 SOS1Q07889 1333 aaPredicted RBP17.2■□□□□ 0.34
SMG6-203ENST00000536871 HOXC9P31274 260 aa17.2■□□□□ 0.34
SMG6-203ENST00000536871 BABAM1Q9NWV8 329 aa17.2■□□□□ 0.34
SMG6-203ENST00000536871 PSME1Q06323 249 aa17.18■□□□□ 0.34
SMG6-203ENST00000536871 EYA1Q99502 592 aa17.18■□□□□ 0.34
SMG6-203ENST00000536871 ABCC4O15439 1325 aa17.18■□□□□ 0.34
SMG6-203ENST00000536871 PAK3O75914 559 aaPredicted RBP17.17■□□□□ 0.34
SMG6-203ENST00000536871 NCOA3Q9Y6Q9 1424 aa17.17■□□□□ 0.34
SMG6-203ENST00000536871 CRB1P82279 1406 aa17.16■□□□□ 0.34
SMG6-203ENST00000536871 PTPRCP08575 1304 aa17.16■□□□□ 0.34
SMG6-203ENST00000536871 SOX12O15370 315 aa17.16■□□□□ 0.34
SMG6-203ENST00000536871 SMC5Q8IY18 1101 aa17.16■□□□□ 0.34
SMG6-203ENST00000536871 PDZRN3Q9UPQ7 1066 aa17.16■□□□□ 0.34
SMG6-203ENST00000536871 FAM83GA6ND36 823 aa17.16■□□□□ 0.34
SMG6-203ENST00000536871 ESCO1Q5FWF5 840 aa17.16■□□□□ 0.34
SMG6-203ENST00000536871 C14orf37Q86TY3 774 aa17.16■□□□□ 0.34
SMG6-203ENST00000536871 TSPYL6Q8N831 410 aa17.16■□□□□ 0.34
SMG6-203ENST00000536871 C8orf58Q8NAV2 365 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms