RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 CFHP08603 1231 aa11.01□□□□□ -0.65
YBX3-206ENST00000536823 RSPH4AQ5TD94 716 aa11.01□□□□□ -0.65
YBX3-206ENST00000536823 MROH2AA6NES4 1674 aa11.01□□□□□ -0.65
YBX3-206ENST00000536823 PREX1Q8TCU6 1659 aa11.01□□□□□ -0.65
YBX3-206ENST00000536823 MAST1Q9Y2H9 1570 aa11□□□□□ -0.65
YBX3-206ENST00000536823 AVPP01185 164 aa11□□□□□ -0.65
YBX3-206ENST00000536823 DHX29Q7Z478 1369 aaKnown RBP11□□□□□ -0.65
YBX3-206ENST00000536823 NR1I2O75469 434 aa10.99□□□□□ -0.65
YBX3-206ENST00000536823 CEBPAP49715 358 aaPredicted RBP10.99□□□□□ -0.65
YBX3-206ENST00000536823 ESF1Q9H501 851 aaKnown RBP10.99□□□□□ -0.65
YBX3-206ENST00000536823 TMEM134Q9H6X4 195 aa10.98□□□□□ -0.65
YBX3-206ENST00000536823 UHRF1BP1Q6BDS2 1440 aa10.98□□□□□ -0.65
YBX3-206ENST00000536823 PTPN23Q9H3S7 1636 aa10.98□□□□□ -0.65
YBX3-206ENST00000536823 CTC1Q2NKJ3 1217 aa10.97□□□□□ -0.65
YBX3-206ENST00000536823 FGD6Q6ZV73 1430 aa10.97□□□□□ -0.65
YBX3-206ENST00000536823 FAM135AQ9P2D6 1515 aa10.97□□□□□ -0.65
YBX3-206ENST00000536823 CLTCQ00610 1675 aaKnown RBP10.97□□□□□ -0.65
YBX3-206ENST00000536823 TCOF1Q13428 1488 aaKnown RBP10.96□□□□□ -0.65
YBX3-206ENST00000536823 SHANK2Q9UPX8 1470 aa10.96□□□□□ -0.65
YBX3-206ENST00000536823 NPATQ14207 1427 aa10.96□□□□□ -0.65
YBX3-206ENST00000536823 TSPY4P0CV99 314 aa10.96□□□□□ -0.65
YBX3-206ENST00000536823 TSPY10P0CW01 314 aa10.96□□□□□ -0.65
YBX3-206ENST00000536823 HSPA2P54652 639 aa10.96□□□□□ -0.65
YBX3-206ENST00000536823 TOR4AQ9NXH8 423 aa10.96□□□□□ -0.65
YBX3-206ENST00000536823 CROCC2H7BZ55 1655 aa10.95□□□□□ -0.66
YBX3-206ENST00000536823 CYP4X1Q8N118 509 aa10.95□□□□□ -0.66
YBX3-206ENST00000536823 RBM46Q8TBY0 533 aaKnown RBP10.95□□□□□ -0.66
YBX3-206ENST00000536823 ZMYM3Q14202 1370 aa10.94□□□□□ -0.66
YBX3-206ENST00000536823 GGT6Q6P531 493 aa10.94□□□□□ -0.66
YBX3-206ENST00000536823 WDR70Q9NW82 654 aa10.94□□□□□ -0.66
YBX3-206ENST00000536823 DNMT1P26358 1616 aaKnown RBP10.94□□□□□ -0.66
YBX3-206ENST00000536823 RNF17Q9BXT8 1623 aaKnown RBP10.94□□□□□ -0.66
YBX3-206ENST00000536823 KDM5DQ9BY66 1539 aa10.94□□□□□ -0.66
YBX3-206ENST00000536823 KIF3BO15066 747 aa10.93□□□□□ -0.66
YBX3-206ENST00000536823 TSHZ2Q9NRE2 1034 aa10.93□□□□□ -0.66
YBX3-206ENST00000536823 EIF2AK4Q9P2K8 1649 aaKnown RBP10.93□□□□□ -0.66
YBX3-206ENST00000536823 ABCC5O15440 1437 aa10.92□□□□□ -0.66
YBX3-206ENST00000536823 PTPRKQ15262 1439 aa10.92□□□□□ -0.66
YBX3-206ENST00000536823 RPIAP49247 311 aa10.92□□□□□ -0.66
YBX3-206ENST00000536823 SMCPP49901 116 aaPredicted RBP10.92□□□□□ -0.66
YBX3-206ENST00000536823 KDM2AQ9Y2K7 1162 aa10.92□□□□□ -0.66
YBX3-206ENST00000536823 DAPK1P53355 1430 aa10.92□□□□□ -0.66
YBX3-206ENST00000536823 DUOX2Q9NRD8 1548 aa10.91□□□□□ -0.66
YBX3-206ENST00000536823 SCUBE3Q8IX30 993 aa10.91□□□□□ -0.66
YBX3-206ENST00000536823 ZNF142P52746 1687 aaPredicted RBP10.91□□□□□ -0.66
YBX3-206ENST00000536823 MYO3AQ8NEV4 1616 aa10.91□□□□□ -0.66
YBX3-206ENST00000536823 KIF15Q9NS87 1388 aa10.9□□□□□ -0.66
YBX3-206ENST00000536823 PZPP20742 1482 aa10.9□□□□□ -0.66
YBX3-206ENST00000536823 SPSB2Q99619 263 aa10.9□□□□□ -0.66
YBX3-206ENST00000536823 MROH1Q8NDA8 1641 aa10.89□□□□□ -0.67
YBX3-206ENST00000536823 RCCD1A6NED2 376 aa10.89□□□□□ -0.67
YBX3-206ENST00000536823 SLC10A3P09131 477 aa10.89□□□□□ -0.67
YBX3-206ENST00000536823 LCE2CQ5TA81 110 aa10.89□□□□□ -0.67
YBX3-206ENST00000536823 ADGRG1Q9Y653 693 aa10.89□□□□□ -0.67
YBX3-206ENST00000536823 STRCQ7RTU9 1775 aa10.89□□□□□ -0.67
YBX3-206ENST00000536823 ABCC3O15438 1527 aa10.89□□□□□ -0.67
YBX3-206ENST00000536823 ZC3H13Q5T200 1668 aaKnown RBP10.89□□□□□ -0.67
YBX3-206ENST00000536823 CD2BP2O95400 341 aaKnown RBP10.88□□□□□ -0.67
YBX3-206ENST00000536823 NCOA1Q15788 1441 aa10.88□□□□□ -0.67
YBX3-206ENST00000536823 ERBINQ96RT1 1412 aa10.88□□□□□ -0.67
YBX3-206ENST00000536823 CEP170BQ9Y4F5 1589 aaPredicted RBP10.87□□□□□ -0.67
YBX3-206ENST00000536823 TERTO14746 1132 aaKnown RBP10.87□□□□□ -0.67
YBX3-206ENST00000536823 PRDM15P57071 1507 aaPredicted RBP10.87□□□□□ -0.67
YBX3-206ENST00000536823 ADGRL2O95490 1459 aa10.87□□□□□ -0.67
YBX3-206ENST00000536823 WASHC2CQ9Y4E1 1318 aa10.86□□□□□ -0.67
YBX3-206ENST00000536823 PUS10Q3MIT2 529 aaKnown RBP10.86□□□□□ -0.67
YBX3-206ENST00000536823 FCF1Q9Y324 198 aaKnown RBP10.86□□□□□ -0.67
YBX3-206ENST00000536823 TNRQ92752 1358 aa10.86□□□□□ -0.67
YBX3-206ENST00000536823 ANKRD30AQ9BXX3 1397 aa10.86□□□□□ -0.67
YBX3-206ENST00000536823 A2ML1A8K2U0 1454 aa10.86□□□□□ -0.67
YBX3-206ENST00000536823 DEPDC5O75140 1603 aa10.85□□□□□ -0.67
YBX3-206ENST00000536823 CAMSAP1Q5T5Y3 1602 aa10.85□□□□□ -0.67
YBX3-206ENST00000536823 TTC24A2A3L6 582 aaPredicted RBP10.85□□□□□ -0.67
YBX3-206ENST00000536823 PTGDRQ13258 359 aa10.85□□□□□ -0.67
YBX3-206ENST00000536823 PLA2R1Q13018 1463 aa10.85□□□□□ -0.67
YBX3-206ENST00000536823 PTPRTO14522 1441 aa10.84□□□□□ -0.67
YBX3-206ENST00000536823 CEP152O94986 1710 aa10.84□□□□□ -0.67
YBX3-206ENST00000536823 LOC100996750A0A140TA64 210 aa10.84□□□□□ -0.67
YBX3-206ENST00000536823 SNRPBP14678 240 aaKnown RBP10.84□□□□□ -0.67
YBX3-206ENST00000536823 FAM50AQ14320 339 aaKnown RBP10.84□□□□□ -0.67
YBX3-206ENST00000536823 KRTAP4-6Q9BYQ5 205 aa10.84□□□□□ -0.67
YBX3-206ENST00000536823 ATP13A2Q9NQ11 1180 aa10.84□□□□□ -0.67
YBX3-206ENST00000536823 RRP7BPQ9NSQ0 103 aa10.84□□□□□ -0.67
YBX3-206ENST00000536823 FAM161AQ3B820 660 aa10.83□□□□□ -0.68
YBX3-206ENST00000536823 FBXO31Q5XUX0 539 aaPredicted RBP10.83□□□□□ -0.68
YBX3-206ENST00000536823 CHIC2Q9UKJ5 165 aa10.83□□□□□ -0.68
YBX3-206ENST00000536823 SPATA31D1Q6ZQQ2 1576 aa10.82□□□□□ -0.68
YBX3-206ENST00000536823 ERVK-7P63135 1459 aa10.82□□□□□ -0.68
YBX3-206ENST00000536823 NLRP1Q9C000 1473 aa10.82□□□□□ -0.68
YBX3-206ENST00000536823 FAM181BA6NEQ2 426 aa10.82□□□□□ -0.68
YBX3-206ENST00000536823 ARHGAP31Q2M1Z3 1444 aa10.81□□□□□ -0.68
YBX3-206ENST00000536823 VWDEQ8N2E2 1590 aa10.81□□□□□ -0.68
YBX3-206ENST00000536823 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.8□□□□□ -0.68
YBX3-206ENST00000536823 TRIM47Q96LD4 638 aa10.8□□□□□ -0.68
YBX3-206ENST00000536823 SENP2Q9HC62 589 aa10.8□□□□□ -0.68
YBX3-206ENST00000536823 LMTK2Q8IWU2 1503 aa10.79□□□□□ -0.68
YBX3-206ENST00000536823 KANK1Q14678 1352 aa10.79□□□□□ -0.68
YBX3-206ENST00000536823 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.79□□□□□ -0.68
YBX3-206ENST00000536823 FBXO41Q8TF61 875 aa10.79□□□□□ -0.68
YBX3-206ENST00000536823 ANKRD50Q9ULJ7 1429 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms