RNA–Protein interactions for RNA: ENST00000536805.5

PTCD2-211, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2 BASIC

Gene PTCD2, Length 1,911 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-211ENST00000536805 TRIM44Q96DX7 344 aaPredicted RBP15.05■□□□□ 0
PTCD2-211ENST00000536805 GOLGA6L22H0YM25 854 aa15.05■□□□□ -0
PTCD2-211ENST00000536805 HSP90AA1P07900 732 aaKnown RBP15.05■□□□□ -0
PTCD2-211ENST00000536805 GAS2L3Q86XJ1 694 aa15.05■□□□□ -0
PTCD2-211ENST00000536805 KIF24Q5T7B8 1368 aa15.05■□□□□ -0
PTCD2-211ENST00000536805 CDC45O75419 566 aa15.04■□□□□ -0
PTCD2-211ENST00000536805 ERBB4Q15303 1308 aa15.04■□□□□ -0
PTCD2-211ENST00000536805 YTHDC2Q9H6S0 1430 aaKnown RBP15.04■□□□□ -0
PTCD2-211ENST00000536805 ARHGEF40Q8TER5 1519 aa15.04■□□□□ -0
PTCD2-211ENST00000536805 TMEM131LA2VDJ0 1609 aa15.04■□□□□ -0
PTCD2-211ENST00000536805 RRP9O43818 475 aaKnown RBP15.04■□□□□ -0
PTCD2-211ENST00000536805 VAMP4O75379 141 aa15.04■□□□□ -0
PTCD2-211ENST00000536805 CCDC173Q0VFZ6 552 aa15.04■□□□□ -0
PTCD2-211ENST00000536805 SAFB2Q14151 953 aaKnown RBP eCLIP15.04■□□□□ -0
PTCD2-211ENST00000536805 NFE2L2Q16236 605 aa15.04■□□□□ -0
PTCD2-211ENST00000536805 GLIPR1L2Q4G1C9 344 aa15.04■□□□□ -0
PTCD2-211ENST00000536805 SLC52A1Q9NWF4 448 aa15.04■□□□□ -0
PTCD2-211ENST00000536805 YEATS2Q9ULM3 1422 aa15.03■□□□□ -0
PTCD2-211ENST00000536805 DIP2CQ9Y2E4 1556 aa15.03■□□□□ -0
PTCD2-211ENST00000536805 MYO5BQ9ULV0 1848 aa15.03■□□□□ -0
PTCD2-211ENST00000536805 ATP7BP35670 1465 aa15.03■□□□□ -0
PTCD2-211ENST00000536805 CD2BP2O95400 341 aaKnown RBP15.03■□□□□ -0
PTCD2-211ENST00000536805 NUTM2DQ5VT03 806 aaPredicted RBP15.03■□□□□ -0
PTCD2-211ENST00000536805 IFT57Q9NWB7 429 aa15.03■□□□□ -0
PTCD2-211ENST00000536805 PRKAR2BP31323 418 aa15.02■□□□□ -0
PTCD2-211ENST00000536805 GNAI1P63096 354 aa15.02■□□□□ -0
PTCD2-211ENST00000536805 KLHL40Q2TBA0 621 aa15.02■□□□□ -0
PTCD2-211ENST00000536805 PPP1R9BQ96SB3 815 aa15.02■□□□□ -0
PTCD2-211ENST00000536805 PREX1Q8TCU6 1659 aa15.01□□□□□ -0.01
PTCD2-211ENST00000536805 RABEP1Q15276 862 aa15.01□□□□□ -0.01
PTCD2-211ENST00000536805 NEO1Q92859 1461 aa15.01□□□□□ -0.01
PTCD2-211ENST00000536805 MINK1Q8N4C8 1332 aaPredicted RBP15□□□□□ -0.01
PTCD2-211ENST00000536805 ZNF853P0CG23 659 aa15□□□□□ -0.01
PTCD2-211ENST00000536805 SSFA2P28290 1259 aa15□□□□□ -0.01
PTCD2-211ENST00000536805 IDI1Q13907 227 aa15□□□□□ -0.01
PTCD2-211ENST00000536805 SIRT2Q8IXJ6 389 aa15□□□□□ -0.01
PTCD2-211ENST00000536805 GAS2L2Q8NHY3 880 aa15□□□□□ -0.01
PTCD2-211ENST00000536805 PRAM1Q96QH2 718 aa15□□□□□ -0.01
PTCD2-211ENST00000536805 API5Q9BZZ5 524 aaKnown RBP15□□□□□ -0.01
PTCD2-211ENST00000536805 DLC1Q96QB1 1528 aa15□□□□□ -0.01
PTCD2-211ENST00000536805 TPM2P07951 284 aa15□□□□□ -0.01
PTCD2-211ENST00000536805 STK26Q9P289 416 aa15□□□□□ -0.01
PTCD2-211ENST00000536805 CDK12Q9NYV4 1490 aaPredicted RBP14.99□□□□□ -0.01
PTCD2-211ENST00000536805 KNDC1Q76NI1 1749 aa14.99□□□□□ -0.01
PTCD2-211ENST00000536805 BAG4O95429 457 aaKnown RBP14.99□□□□□ -0.01
PTCD2-211ENST00000536805 C1orf115Q9H7X2 142 aa14.99□□□□□ -0.01
PTCD2-211ENST00000536805 ALKQ9UM73 1620 aa14.99□□□□□ -0.01
PTCD2-211ENST00000536805 HSP90AA2PQ14568 343 aaPredicted RBP14.98□□□□□ -0.01
PTCD2-211ENST00000536805 POLKQ9UBT6 870 aa14.98□□□□□ -0.01
PTCD2-211ENST00000536805 NASPP49321 788 aaPredicted RBP14.98□□□□□ -0.01
PTCD2-211ENST00000536805 NUCB2P80303 420 aa14.98□□□□□ -0.01
PTCD2-211ENST00000536805 LMOD3Q0VAK6 560 aa14.98□□□□□ -0.01
PTCD2-211ENST00000536805 MAP2P11137 1827 aaKnown RBP14.97□□□□□ -0.01
PTCD2-211ENST00000536805 GSPT1P15170 499 aaKnown RBP14.97□□□□□ -0.01
PTCD2-211ENST00000536805 ZNF445P59923 1031 aa14.97□□□□□ -0.01
PTCD2-211ENST00000536805 ANP32BQ92688 251 aaKnown RBP14.97□□□□□ -0.01
PTCD2-211ENST00000536805 RBM42Q9BTD8 480 aaKnown RBP14.97□□□□□ -0.01
PTCD2-211ENST00000536805 PLEKHM2Q8IWE5 1019 aa14.96□□□□□ -0.01
PTCD2-211ENST00000536805 TSPYL6Q8N831 410 aa14.96□□□□□ -0.01
PTCD2-211ENST00000536805 CDK19Q9BWU1 502 aa14.96□□□□□ -0.01
PTCD2-211ENST00000536805 MBIPQ9NS73 344 aa14.96□□□□□ -0.01
PTCD2-211ENST00000536805 FOXD4L1Q9NU39 408 aa14.96□□□□□ -0.01
PTCD2-211ENST00000536805 DLG5Q8TDM6 1919 aa14.96□□□□□ -0.01
PTCD2-211ENST00000536805 CYP2E1P05181 493 aaPredicted RBP14.96□□□□□ -0.02
PTCD2-211ENST00000536805 TWISTNBQ3B726 338 aaPredicted RBP14.96□□□□□ -0.02
PTCD2-211ENST00000536805 TTC22Q5TAA0 569 aa14.96□□□□□ -0.02
PTCD2-211ENST00000536805 ZSCAN30Q86W11 494 aa14.96□□□□□ -0.02
PTCD2-211ENST00000536805 DCTPP1Q9H773 170 aa14.96□□□□□ -0.02
PTCD2-211ENST00000536805 DDX49Q9Y6V7 483 aaKnown RBP14.96□□□□□ -0.02
PTCD2-211ENST00000536805 CPSF1Q10570 1443 aaKnown RBP14.95□□□□□ -0.02
PTCD2-211ENST00000536805 PHACTR3Q96KR7 559 aa14.95□□□□□ -0.02
PTCD2-211ENST00000536805 CABP1Q9NZU7 370 aa14.95□□□□□ -0.02
PTCD2-211ENST00000536805 AATKQ6ZMQ8 1374 aa14.94□□□□□ -0.02
PTCD2-211ENST00000536805 HS1BP3Q53T59 392 aa14.94□□□□□ -0.02
PTCD2-211ENST00000536805 CWC22Q9HCG8 908 aaKnown RBP14.94□□□□□ -0.02
PTCD2-211ENST00000536805 RIMS2Q9UQ26 1411 aa14.94□□□□□ -0.02
PTCD2-211ENST00000536805 RICTORQ6R327 1708 aa14.94□□□□□ -0.02
PTCD2-211ENST00000536805 IL13P35225 146 aa14.94□□□□□ -0.02
PTCD2-211ENST00000536805 INTS3Q68E01 1043 aaKnown RBP14.94□□□□□ -0.02
PTCD2-211ENST00000536805 EDC4Q6P2E9 1401 aaKnown RBP14.93□□□□□ -0.02
PTCD2-211ENST00000536805 NPM1P06748 294 aaKnown RBP eCLIP14.93□□□□□ -0.02
PTCD2-211ENST00000536805 THUMPD2Q9BTF0 503 aaKnown RBP14.93□□□□□ -0.02
PTCD2-211ENST00000536805 USP26Q9BXU7 913 aa14.93□□□□□ -0.02
PTCD2-211ENST00000536805 ATP10DQ9P241 1426 aa14.93□□□□□ -0.02
PTCD2-211ENST00000536805 HMOX1P09601 288 aa14.92□□□□□ -0.02
PTCD2-211ENST00000536805 TERF1P54274 439 aa14.92□□□□□ -0.02
PTCD2-211ENST00000536805 HAP1P54257 671 aaPredicted RBP14.91□□□□□ -0.02
PTCD2-211ENST00000536805 ANKRD44Q8N8A2 993 aa14.91□□□□□ -0.02
PTCD2-211ENST00000536805 LMBRD1Q9NUN5 540 aa14.91□□□□□ -0.02
PTCD2-211ENST00000536805 OFD1O75665 1012 aa14.9□□□□□ -0.02
PTCD2-211ENST00000536805 CASC1Q6TDU7 716 aa14.9□□□□□ -0.02
PTCD2-211ENST00000536805 RPAP2Q8IXW5 612 aaPredicted RBP14.9□□□□□ -0.02
PTCD2-211ENST00000536805 C8orf58Q8NAV2 365 aa14.9□□□□□ -0.02
PTCD2-211ENST00000536805 SETD1AO15047 1707 aaKnown RBP14.9□□□□□ -0.02
PTCD2-211ENST00000536805 NRKQ7Z2Y5 1582 aa14.9□□□□□ -0.02
PTCD2-211ENST00000536805 ST18O60284 1047 aa14.9□□□□□ -0.02
PTCD2-211ENST00000536805 MCTP1Q6DN14 999 aa14.9□□□□□ -0.02
PTCD2-211ENST00000536805 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.9□□□□□ -0.02
PTCD2-211ENST00000536805 AK9Q5TCS8 1911 aa14.89□□□□□ -0.03
PTCD2-211ENST00000536805 RGS12O14924 1447 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms