RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 C19orf44Q9H6X5 657 aa10.46□□□□□ -0.73
ABCA4-207ENST00000536513 TSPYL4Q9UJ04 414 aa10.46□□□□□ -0.73
ABCA4-207ENST00000536513 PLEKHG1Q9ULL1 1385 aa10.46□□□□□ -0.73
ABCA4-207ENST00000536513 NAP1L5Q96NT1 182 aaPredicted RBP10.46□□□□□ -0.73
ABCA4-207ENST00000536513 PTPRUQ92729 1446 aa10.46□□□□□ -0.74
ABCA4-207ENST00000536513 ZMYM4Q5VZL5 1548 aa10.46□□□□□ -0.74
ABCA4-207ENST00000536513 TMEM94Q12767 1356 aa10.45□□□□□ -0.74
ABCA4-207ENST00000536513 TULP4Q9NRJ4 1543 aa10.45□□□□□ -0.74
ABCA4-207ENST00000536513 ANXA1P04083 346 aa10.45□□□□□ -0.74
ABCA4-207ENST00000536513 TSPYL6Q8N831 410 aa10.45□□□□□ -0.74
ABCA4-207ENST00000536513 PTPRMP28827 1452 aa10.45□□□□□ -0.74
ABCA4-207ENST00000536513 EYA1Q99502 592 aa10.45□□□□□ -0.74
ABCA4-207ENST00000536513 ADAMTS13Q76LX8 1427 aa10.45□□□□□ -0.74
ABCA4-207ENST00000536513 A0A0U1RQG5 324 aaPredicted RBP10.45□□□□□ -0.74
ABCA4-207ENST00000536513 KDM5AP29375 1690 aaKnown RBP10.45□□□□□ -0.74
ABCA4-207ENST00000536513 TMEM131LA2VDJ0 1609 aa10.44□□□□□ -0.74
ABCA4-207ENST00000536513 GCP02774 474 aa10.44□□□□□ -0.74
ABCA4-207ENST00000536513 PIP4K2AP48426 406 aaPredicted RBP10.44□□□□□ -0.74
ABCA4-207ENST00000536513 ADGRB1O14514 1584 aa10.44□□□□□ -0.74
ABCA4-207ENST00000536513 RIMS1Q86UR5 1692 aaKnown RBP10.44□□□□□ -0.74
ABCA4-207ENST00000536513 TEFQ10587 303 aa10.44□□□□□ -0.74
ABCA4-207ENST00000536513 TOM1L2Q6ZVM7 507 aa10.44□□□□□ -0.74
ABCA4-207ENST00000536513 FCHSD2O94868 740 aa10.44□□□□□ -0.74
ABCA4-207ENST00000536513 AIMP1Q12904 312 aaKnown RBP10.44□□□□□ -0.74
ABCA4-207ENST00000536513 NOB1Q9ULX3 412 aaKnown RBP10.44□□□□□ -0.74
ABCA4-207ENST00000536513 NLRP1Q9C000 1473 aa10.44□□□□□ -0.74
ABCA4-207ENST00000536513 AGLP35573 1532 aa10.43□□□□□ -0.74
ABCA4-207ENST00000536513 ZNF530Q6P9A1 599 aaPredicted RBP10.43□□□□□ -0.74
ABCA4-207ENST00000536513 SSH1Q8WYL5 1049 aa10.43□□□□□ -0.74
ABCA4-207ENST00000536513 CDK11BP21127 795 aaKnown RBP10.43□□□□□ -0.74
ABCA4-207ENST00000536513 RAPGEF4Q8WZA2 1011 aa10.43□□□□□ -0.74
ABCA4-207ENST00000536513 BCL11BQ9C0K0 894 aaPredicted RBP10.43□□□□□ -0.74
ABCA4-207ENST00000536513 BRPF3Q9ULD4 1205 aa10.43□□□□□ -0.74
ABCA4-207ENST00000536513 ZFYVE9O95405 1425 aa10.42□□□□□ -0.74
ABCA4-207ENST00000536513 QRICH2Q9H0J4 1663 aa10.42□□□□□ -0.74
ABCA4-207ENST00000536513 SBNO2Q9Y2G9 1366 aa10.42□□□□□ -0.74
ABCA4-207ENST00000536513 NFE2L2Q16236 605 aa10.42□□□□□ -0.74
ABCA4-207ENST00000536513 MTHFSDQ2M296 383 aaKnown RBP10.42□□□□□ -0.74
ABCA4-207ENST00000536513 C1orf141Q5JVX7 400 aa10.42□□□□□ -0.74
ABCA4-207ENST00000536513 TWISTNBQ3B726 338 aaPredicted RBP10.42□□□□□ -0.74
ABCA4-207ENST00000536513 NPHP4O75161 1426 aaPredicted RBP10.42□□□□□ -0.74
ABCA4-207ENST00000536513 SMG6Q86US8 1419 aaKnown RBP10.42□□□□□ -0.74
ABCA4-207ENST00000536513 IL13P35225 146 aa10.41□□□□□ -0.74
ABCA4-207ENST00000536513 CADPS2Q86UW7 1296 aa10.41□□□□□ -0.74
ABCA4-207ENST00000536513 RSPH6AQ9H0K4 717 aa10.41□□□□□ -0.74
ABCA4-207ENST00000536513 F6X3S4 739 aa10.41□□□□□ -0.74
ABCA4-207ENST00000536513 NBPF6Q5VWK0 638 aa10.41□□□□□ -0.74
ABCA4-207ENST00000536513 ANKRD24Q8TF21 1146 aa10.41□□□□□ -0.74
ABCA4-207ENST00000536513 NBPF4Q96M43 638 aa10.41□□□□□ -0.74
ABCA4-207ENST00000536513 TRIM35Q9UPQ4 493 aa10.41□□□□□ -0.74
ABCA4-207ENST00000536513 PPLO60437 1756 aa10.4□□□□□ -0.74
ABCA4-207ENST00000536513 PLEKHG3A1L390 1219 aa10.4□□□□□ -0.74
ABCA4-207ENST00000536513 RLBP1P12271 317 aa10.4□□□□□ -0.74
ABCA4-207ENST00000536513 HOXC9P31274 260 aa10.4□□□□□ -0.74
ABCA4-207ENST00000536513 C8orf58Q8NAV2 365 aa10.4□□□□□ -0.74
ABCA4-207ENST00000536513 MBIPQ9NS73 344 aa10.4□□□□□ -0.74
ABCA4-207ENST00000536513 SLC39A6Q13433 755 aa10.4□□□□□ -0.74
ABCA4-207ENST00000536513 SLC4A3P48751 1232 aa10.4□□□□□ -0.75
ABCA4-207ENST00000536513 RARSP54136 660 aaKnown RBP10.4□□□□□ -0.75
ABCA4-207ENST00000536513 ZKSCAN2Q63HK3 967 aa10.4□□□□□ -0.75
ABCA4-207ENST00000536513 SLAIN2Q9P270 581 aa10.4□□□□□ -0.75
ABCA4-207ENST00000536513 POLR3AO14802 1390 aaPredicted RBP10.39□□□□□ -0.75
ABCA4-207ENST00000536513 PTCD1O75127 700 aaKnown RBP10.39□□□□□ -0.75
ABCA4-207ENST00000536513 SLC4A2P04920 1241 aa10.39□□□□□ -0.75
ABCA4-207ENST00000536513 FKBP5Q13451 457 aaPredicted RBP10.39□□□□□ -0.75
ABCA4-207ENST00000536513 MSH6P52701 1360 aa10.39□□□□□ -0.75
ABCA4-207ENST00000536513 DZIP1LQ8IYY4 767 aaKnown RBP10.38□□□□□ -0.75
ABCA4-207ENST00000536513 DDRGK1Q96HY6 314 aa10.38□□□□□ -0.75
ABCA4-207ENST00000536513 SPATA31D1Q6ZQQ2 1576 aa10.38□□□□□ -0.75
ABCA4-207ENST00000536513 GNAI1P63096 354 aa10.38□□□□□ -0.75
ABCA4-207ENST00000536513 STK31Q9BXU1 1019 aa10.38□□□□□ -0.75
ABCA4-207ENST00000536513 AXIN2Q9Y2T1 843 aa10.38□□□□□ -0.75
ABCA4-207ENST00000536513 NRXN1Q9ULB1 1477 aa10.38□□□□□ -0.75
ABCA4-207ENST00000536513 LGR6Q9HBX8 967 aa10.38□□□□□ -0.75
ABCA4-207ENST00000536513 EDC4Q6P2E9 1401 aaKnown RBP10.37□□□□□ -0.75
ABCA4-207ENST00000536513 IQGAP1P46940 1657 aa10.37□□□□□ -0.75
ABCA4-207ENST00000536513 FER1L4A9Z1Z3 1794 aa10.37□□□□□ -0.75
ABCA4-207ENST00000536513 MYL6BP14649 208 aa10.37□□□□□ -0.75
ABCA4-207ENST00000536513 LMOD3Q0VAK6 560 aa10.37□□□□□ -0.75
ABCA4-207ENST00000536513 UBAP1LF5GYI3 381 aa10.36□□□□□ -0.75
ABCA4-207ENST00000536513 TMEM57Q8N5G2 664 aa10.36□□□□□ -0.75
ABCA4-207ENST00000536513 CPS1P31327 1500 aa10.36□□□□□ -0.75
ABCA4-207ENST00000536513 WDR63Q8IWG1 891 aa10.36□□□□□ -0.75
ABCA4-207ENST00000536513 JARID2Q92833 1246 aaPredicted RBP10.36□□□□□ -0.75
ABCA4-207ENST00000536513 TAF7LQ5H9L4 462 aa10.35□□□□□ -0.75
ABCA4-207ENST00000536513 NINLQ9Y2I6 1382 aa10.35□□□□□ -0.75
ABCA4-207ENST00000536513 CALD1Q05682 793 aaKnown RBP10.35□□□□□ -0.75
ABCA4-207ENST00000536513 CFAP44Q96MT7 982 aa10.35□□□□□ -0.75
ABCA4-207ENST00000536513 PUS7Q96PZ0 661 aaKnown RBP10.35□□□□□ -0.75
ABCA4-207ENST00000536513 USP6P35125 1406 aa10.35□□□□□ -0.75
ABCA4-207ENST00000536513 GNAT3A8MTJ3 354 aa10.35□□□□□ -0.75
ABCA4-207ENST00000536513 IPO8O15397 1037 aaKnown RBP10.35□□□□□ -0.75
ABCA4-207ENST00000536513 KCNQ3O43525 872 aa10.35□□□□□ -0.75
ABCA4-207ENST00000536513 TRIM27P14373 513 aa10.35□□□□□ -0.75
ABCA4-207ENST00000536513 KCNH5Q8NCM2 988 aa10.35□□□□□ -0.75
ABCA4-207ENST00000536513 NSD2O96028 1365 aa10.35□□□□□ -0.75
ABCA4-207ENST00000536513 PLEKHF1Q96S99 279 aa10.34□□□□□ -0.75
ABCA4-207ENST00000536513 LNPKQ9C0E8 428 aa10.34□□□□□ -0.75
ABCA4-207ENST00000536513 FAM177BA6PVY3 158 aa10.34□□□□□ -0.75
ABCA4-207ENST00000536513 GSE1Q14687 1217 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms