RNA–Protein interactions for RNA: ENST00000536461.5

KDM4B-203, Transcript of lysine demethylase 4B, humanhuman

TSL 1 (best) BASIC

Gene KDM4B, Length 5,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-203ENST00000536461 CCDC184Q52MB2 194 aa19.48■□□□□ 0.71
KDM4B-203ENST00000536461 KDM5BQ9UGL1 1544 aa19.48■□□□□ 0.71
KDM4B-203ENST00000536461 GPATCH8Q9UKJ3 1502 aaKnown RBP19.47■□□□□ 0.71
KDM4B-203ENST00000536461 NSD3Q9BZ95 1437 aa19.47■□□□□ 0.71
KDM4B-203ENST00000536461 CCDC39Q9UFE4 941 aa19.47■□□□□ 0.71
KDM4B-203ENST00000536461 GNAT3A8MTJ3 354 aa19.47■□□□□ 0.71
KDM4B-203ENST00000536461 AMOTQ4VCS5 1084 aa19.47■□□□□ 0.71
KDM4B-203ENST00000536461 NME9Q86XW9 330 aa19.47■□□□□ 0.71
KDM4B-203ENST00000536461 TRIM29Q14134 588 aa19.47■□□□□ 0.71
KDM4B-203ENST00000536461 A2MP01023 1474 aa19.47■□□□□ 0.71
KDM4B-203ENST00000536461 NFXL1Q6ZNB6 911 aa19.47■□□□□ 0.71
KDM4B-203ENST00000536461 MPHOSPH8Q99549 860 aa19.47■□□□□ 0.71
KDM4B-203ENST00000536461 NOS1P29475 1434 aa19.46■□□□□ 0.71
KDM4B-203ENST00000536461 ZNF592Q92610 1267 aa19.46■□□□□ 0.71
KDM4B-203ENST00000536461 C14orf93Q9H972 538 aaKnown RBP19.46■□□□□ 0.71
KDM4B-203ENST00000536461 PTCD1O75127 700 aaKnown RBP19.46■□□□□ 0.71
KDM4B-203ENST00000536461 BECN2A8MW95 431 aa19.46■□□□□ 0.71
KDM4B-203ENST00000536461 BICDL1Q6ZP65 573 aa19.46■□□□□ 0.71
KDM4B-203ENST00000536461 SRCIN1Q9C0H9 1055 aa19.45■□□□□ 0.7
KDM4B-203ENST00000536461 RALYLQ86SE5 291 aaKnown RBP19.45■□□□□ 0.7
KDM4B-203ENST00000536461 CCDC173Q0VFZ6 552 aa19.45■□□□□ 0.7
KDM4B-203ENST00000536461 ZPR1O75312 459 aa19.43■□□□□ 0.7
KDM4B-203ENST00000536461 ZNF652Q9Y2D9 606 aa19.43■□□□□ 0.7
KDM4B-203ENST00000536461 NPHP3Q7Z494 1330 aa19.43■□□□□ 0.7
KDM4B-203ENST00000536461 TSR2Q969E8 191 aaKnown RBP19.43■□□□□ 0.7
KDM4B-203ENST00000536461 SMC3Q9UQE7 1217 aa19.43■□□□□ 0.7
KDM4B-203ENST00000536461 RRP9O43818 475 aaKnown RBP19.43■□□□□ 0.7
KDM4B-203ENST00000536461 TPM3P06753 285 aa19.43■□□□□ 0.7
KDM4B-203ENST00000536461 CCDC57Q2TAC2 916 aa19.43■□□□□ 0.7
KDM4B-203ENST00000536461 ERC1Q8IUD2 1116 aa19.43■□□□□ 0.7
KDM4B-203ENST00000536461 MPRIPQ6WCQ1 1025 aa19.42■□□□□ 0.7
KDM4B-203ENST00000536461 RAPGEF6Q8TEU7 1601 aa19.42■□□□□ 0.7
KDM4B-203ENST00000536461 GNAI2P04899 355 aa19.42■□□□□ 0.7
KDM4B-203ENST00000536461 CNTROBQ8N137 903 aa19.42■□□□□ 0.7
KDM4B-203ENST00000536461 MCM2P49736 904 aa19.42■□□□□ 0.7
KDM4B-203ENST00000536461 CCT4P50991 539 aaKnown RBP19.42■□□□□ 0.7
KDM4B-203ENST00000536461 CCDC158Q5M9N0 1113 aa19.42■□□□□ 0.7
KDM4B-203ENST00000536461 THOC2Q8NI27 1593 aaKnown RBP19.41■□□□□ 0.7
KDM4B-203ENST00000536461 NFE2L2Q16236 605 aa19.41■□□□□ 0.7
KDM4B-203ENST00000536461 HIP1O00291 1037 aa19.41■□□□□ 0.7
KDM4B-203ENST00000536461 PDZRN3Q9UPQ7 1066 aa19.41■□□□□ 0.7
KDM4B-203ENST00000536461 FSD1Q9BTV5 496 aa19.41■□□□□ 0.7
KDM4B-203ENST00000536461 PSMA5P28066 241 aa19.4■□□□□ 0.7
KDM4B-203ENST00000536461 GRPEL1Q9HAV7 217 aa19.4■□□□□ 0.7
KDM4B-203ENST00000536461 CAVIN1Q6NZI2 390 aaKnown RBP19.4■□□□□ 0.7
KDM4B-203ENST00000536461 RBM10P98175 930 aaKnown RBP19.4■□□□□ 0.7
KDM4B-203ENST00000536461 USHBP1Q8N6Y0 703 aa19.4■□□□□ 0.7
KDM4B-203ENST00000536461 HOOK1Q9UJC3 728 aaKnown RBP19.4■□□□□ 0.7
KDM4B-203ENST00000536461 CREBRFQ8IUR6 639 aa19.39■□□□□ 0.7
KDM4B-203ENST00000536461 RNF214Q8ND24 703 aa19.39■□□□□ 0.7
KDM4B-203ENST00000536461 TPM1P09493 284 aa19.39■□□□□ 0.69
KDM4B-203ENST00000536461 CCAR1Q8IX12 1150 aaKnown RBP19.39■□□□□ 0.69
KDM4B-203ENST00000536461 TPD52L1Q16890 204 aaPredicted RBP19.39■□□□□ 0.69
KDM4B-203ENST00000536461 IKQ13123 557 aaPredicted RBP19.38■□□□□ 0.69
KDM4B-203ENST00000536461 ABCC10Q5T3U5 1492 aa19.38■□□□□ 0.69
KDM4B-203ENST00000536461 ESPNB1AK53 854 aa19.38■□□□□ 0.69
KDM4B-203ENST00000536461 TSR1Q2NL82 804 aaKnown RBP19.38■□□□□ 0.69
KDM4B-203ENST00000536461 DNAJC2Q99543 621 aaKnown RBP19.38■□□□□ 0.69
KDM4B-203ENST00000536461 ATF7IPQ6VMQ6 1270 aa19.38■□□□□ 0.69
KDM4B-203ENST00000536461 NUP153P49790 1475 aaKnown RBP19.38■□□□□ 0.69
KDM4B-203ENST00000536461 ACEP12821 1306 aa19.37■□□□□ 0.69
KDM4B-203ENST00000536461 C19orf44Q9H6X5 657 aa19.37■□□□□ 0.69
KDM4B-203ENST00000536461 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.37■□□□□ 0.69
KDM4B-203ENST00000536461 TTC39AQ5SRH9 613 aa19.37■□□□□ 0.69
KDM4B-203ENST00000536461 SLC3A2P08195 630 aaKnown RBP19.37■□□□□ 0.69
KDM4B-203ENST00000536461 GPS2Q13227 327 aa19.36■□□□□ 0.69
KDM4B-203ENST00000536461 NOB1Q9ULX3 412 aaKnown RBP19.36■□□□□ 0.69
KDM4B-203ENST00000536461 ABCC2Q92887 1545 aa19.36■□□□□ 0.69
KDM4B-203ENST00000536461 CHRNA2Q15822 529 aa19.36■□□□□ 0.69
KDM4B-203ENST00000536461 TEX35Q5T0J7 233 aa19.36■□□□□ 0.69
KDM4B-203ENST00000536461 RABEP1Q15276 862 aa19.36■□□□□ 0.69
KDM4B-203ENST00000536461 CCAR2Q8N163 923 aaKnown RBP19.36■□□□□ 0.69
KDM4B-203ENST00000536461 MCM4P33991 863 aa19.36■□□□□ 0.69
KDM4B-203ENST00000536461 CCDC47Q96A33 483 aaKnown RBP19.36■□□□□ 0.69
KDM4B-203ENST00000536461 NCKAP5LQ9HCH0 1330 aa19.35■□□□□ 0.69
KDM4B-203ENST00000536461 EMILIN1Q9Y6C2 1016 aa19.35■□□□□ 0.69
KDM4B-203ENST00000536461 MVPQ14764 893 aaKnown RBP19.35■□□□□ 0.69
KDM4B-203ENST00000536461 IFT57Q9NWB7 429 aa19.35■□□□□ 0.69
KDM4B-203ENST00000536461 MBD3O95983 291 aa19.35■□□□□ 0.69
KDM4B-203ENST00000536461 IGHMBP2P38935 993 aaKnown RBP19.35■□□□□ 0.69
KDM4B-203ENST00000536461 RPRD2Q5VT52 1461 aaKnown RBP19.35■□□□□ 0.69
KDM4B-203ENST00000536461 RBM5P52756 815 aaKnown RBP eCLIP19.34■□□□□ 0.693e-6■■■□□ 15.8
KDM4B-203ENST00000536461 CCDC43Q96MW1 224 aaKnown RBP19.34■□□□□ 0.69
KDM4B-203ENST00000536461 BCL11BQ9C0K0 894 aaPredicted RBP19.34■□□□□ 0.69
KDM4B-203ENST00000536461 BICD2Q8TD16 824 aa19.34■□□□□ 0.69
KDM4B-203ENST00000536461 SART3Q15020 963 aaKnown RBP19.34■□□□□ 0.69
KDM4B-203ENST00000536461 ADAMTS12P58397 1594 aa19.34■□□□□ 0.69
KDM4B-203ENST00000536461 HMGN5P82970 282 aaKnown RBP19.34■□□□□ 0.69
KDM4B-203ENST00000536461 TAF7Q15545 349 aaPredicted RBP19.34■□□□□ 0.69
KDM4B-203ENST00000536461 NOC3LQ8WTT2 800 aaKnown RBP19.34■□□□□ 0.69
KDM4B-203ENST00000536461 CEP126Q9P2H0 1117 aa19.34■□□□□ 0.69
KDM4B-203ENST00000536461 TRAPPC8Q9Y2L5 1435 aa19.34■□□□□ 0.69
KDM4B-203ENST00000536461 ZMYM3Q14202 1370 aa19.34■□□□□ 0.69
KDM4B-203ENST00000536461 VPS37CA5D8V6 355 aaPredicted RBP19.33■□□□□ 0.69
KDM4B-203ENST00000536461 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.33■□□□□ 0.691e-6■■■□□ 17.8
KDM4B-203ENST00000536461 WDR62O43379 1518 aa19.33■□□□□ 0.69
KDM4B-203ENST00000536461 RIMS2Q9UQ26 1411 aa19.33■□□□□ 0.69
KDM4B-203ENST00000536461 TMPOP42166 694 aaKnown RBP19.33■□□□□ 0.69
KDM4B-203ENST00000536461 SAFBQ15424 915 aaKnown RBP eCLIP19.33■□□□□ 0.691e-6■■□□□ 11.4
KDM4B-203ENST00000536461 C8orf37Q96NL8 207 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms