RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 PHF23Q9BUL5 403 aaPredicted RBP27.38■■□□□ 1.97
TRIM3-214ENST00000536344 IL13P35225 146 aa27.38■■□□□ 1.97
TRIM3-214ENST00000536344 HSP90AB2PQ58FF8 381 aa27.37■■□□□ 1.97
TRIM3-214ENST00000536344 ARXQ96QS3 562 aa27.37■■□□□ 1.97
TRIM3-214ENST00000536344 HSPA2P54652 639 aa27.36■■□□□ 1.97
TRIM3-214ENST00000536344 TOPAZ1Q8N9V7 1692 aa27.36■■□□□ 1.97
TRIM3-214ENST00000536344 RGS3P49796 1198 aa27.35■■□□□ 1.97
TRIM3-214ENST00000536344 AEBP1Q8IUX7 1158 aa27.35■■□□□ 1.97
TRIM3-214ENST00000536344 XPCQ01831 940 aaPredicted RBP27.34■■□□□ 1.97
TRIM3-214ENST00000536344 KDM2BQ8NHM5 1336 aa27.34■■□□□ 1.97
TRIM3-214ENST00000536344 NLRP6P59044 892 aa27.33■■□□□ 1.97
TRIM3-214ENST00000536344 FAM161AQ3B820 660 aa27.33■■□□□ 1.97
TRIM3-214ENST00000536344 NGEFQ8N5V2 710 aa27.33■■□□□ 1.97
TRIM3-214ENST00000536344 WDR63Q8IWG1 891 aa27.33■■□□□ 1.97
TRIM3-214ENST00000536344 LRRC7Q96NW7 1537 aa27.33■■□□□ 1.97
TRIM3-214ENST00000536344 FCHSD2O94868 740 aa27.32■■□□□ 1.96
TRIM3-214ENST00000536344 NPHP4O75161 1426 aaPredicted RBP27.32■■□□□ 1.96
TRIM3-214ENST00000536344 ESCO1Q5FWF5 840 aa27.32■■□□□ 1.96
TRIM3-214ENST00000536344 TNNQ9UQP3 1299 aa27.32■■□□□ 1.96
TRIM3-214ENST00000536344 ZNF142P52746 1687 aaPredicted RBP27.31■■□□□ 1.96
TRIM3-214ENST00000536344 CANXP27824 592 aaKnown RBP27.31■■□□□ 1.96
TRIM3-214ENST00000536344 VSIG10Q8N0Z9 540 aa27.31■■□□□ 1.96
TRIM3-214ENST00000536344 EIF4A2Q14240 407 aaKnown RBP27.3■■□□□ 1.96
TRIM3-214ENST00000536344 CCDC27Q2M243 656 aa27.3■■□□□ 1.96
TRIM3-214ENST00000536344 CHD2O14647 1828 aaKnown RBP27.29■■□□□ 1.96
TRIM3-214ENST00000536344 AATKQ6ZMQ8 1374 aa27.29■■□□□ 1.96
TRIM3-214ENST00000536344 ABTB2Q8N961 1025 aa27.29■■□□□ 1.96
TRIM3-214ENST00000536344 PIK3R4Q99570 1358 aa27.29■■□□□ 1.96
TRIM3-214ENST00000536344 SULT6B1Q6IMI4 303 aa27.28■■□□□ 1.96
TRIM3-214ENST00000536344 NRKQ7Z2Y5 1582 aa27.28■■□□□ 1.96
TRIM3-214ENST00000536344 OVOS2A0A0J9YW53 1432 aa27.28■■□□□ 1.96
TRIM3-214ENST00000536344 OVOS2Q6IE36 1432 aa27.28■■□□□ 1.96
TRIM3-214ENST00000536344 PANK1Q8TE04 598 aa27.28■■□□□ 1.96
TRIM3-214ENST00000536344 EXOSC9Q06265 439 aaKnown RBP27.27■■□□□ 1.96
TRIM3-214ENST00000536344 MAP3K19Q56UN5 1328 aa27.27■■□□□ 1.96
TRIM3-214ENST00000536344 FAM83GA6ND36 823 aa27.27■■□□□ 1.96
TRIM3-214ENST00000536344 DCTN1Q14203 1278 aa27.27■■□□□ 1.96
TRIM3-214ENST00000536344 ORAI2Q96SN7 254 aa27.27■■□□□ 1.96
TRIM3-214ENST00000536344 ZMYND15Q9H091 742 aa27.27■■□□□ 1.96
TRIM3-214ENST00000536344 PHF8Q9UPP1 1060 aa27.27■■□□□ 1.96
TRIM3-214ENST00000536344 NALCNQ8IZF0 1738 aa27.27■■□□□ 1.96
TRIM3-214ENST00000536344 ZBTB7CA1YPR0 619 aa27.26■■□□□ 1.96
TRIM3-214ENST00000536344 CLUAP1Q96AJ1 413 aa27.26■■□□□ 1.95
TRIM3-214ENST00000536344 SSH2Q76I76 1423 aa27.26■■□□□ 1.95
TRIM3-214ENST00000536344 CDK12Q9NYV4 1490 aaPredicted RBP27.26■■□□□ 1.95
TRIM3-214ENST00000536344 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.25■■□□□ 1.95
TRIM3-214ENST00000536344 MYH16Q9H6N6 1097 aa27.25■■□□□ 1.95
TRIM3-214ENST00000536344 RARSP54136 660 aaKnown RBP27.25■■□□□ 1.95
TRIM3-214ENST00000536344 PROSER2Q86WR7 435 aaPredicted RBP27.25■■□□□ 1.95
TRIM3-214ENST00000536344 LTV1Q96GA3 475 aaPredicted RBP27.23■■□□□ 1.95
TRIM3-214ENST00000536344 FOXO3O43524 673 aa27.23■■□□□ 1.95
TRIM3-214ENST00000536344 LMOD2Q6P5Q4 547 aa27.23■■□□□ 1.95
TRIM3-214ENST00000536344 AMPHP49418 695 aa27.22■■□□□ 1.95
TRIM3-214ENST00000536344 SLKQ9H2G2 1235 aaPredicted RBP27.22■■□□□ 1.95
TRIM3-214ENST00000536344 COG6Q9Y2V7 657 aa27.22■■□□□ 1.95
TRIM3-214ENST00000536344 PNNQ9H307 717 aaKnown RBP27.22■■□□□ 1.95
TRIM3-214ENST00000536344 NFE2L2Q16236 605 aa27.21■■□□□ 1.95
TRIM3-214ENST00000536344 CENPQQ7L2Z9 268 aaPredicted RBP27.21■■□□□ 1.95
TRIM3-214ENST00000536344 PSME1Q06323 249 aa27.2■■□□□ 1.95
TRIM3-214ENST00000536344 TTC21AQ8NDW8 1320 aa27.2■■□□□ 1.95
TRIM3-214ENST00000536344 ELL2O00472 640 aaPredicted RBP27.2■■□□□ 1.94
TRIM3-214ENST00000536344 PEAK1Q9H792 1746 aa27.19■■□□□ 1.94
TRIM3-214ENST00000536344 FMN2Q9NZ56 1722 aa27.19■■□□□ 1.94
TRIM3-214ENST00000536344 NAP1L5Q96NT1 182 aaPredicted RBP27.19■■□□□ 1.94
TRIM3-214ENST00000536344 PIK3C2AO00443 1686 aa27.17■■□□□ 1.94
TRIM3-214ENST00000536344 RLBP1P12271 317 aa27.17■■□□□ 1.94
TRIM3-214ENST00000536344 ANKARQ7Z5J8 1434 aa27.15■■□□□ 1.94
TRIM3-214ENST00000536344 SEC24BO95487 1268 aa27.15■■□□□ 1.94
TRIM3-214ENST00000536344 USP31Q70CQ4 1352 aa27.15■■□□□ 1.94
TRIM3-214ENST00000536344 DDX17Q92841 729 aaKnown RBP27.15■■□□□ 1.94
TRIM3-214ENST00000536344 ADGRL3Q9HAR2 1447 aa27.14■■□□□ 1.94
TRIM3-214ENST00000536344 USP19O94966 1318 aa27.14■■□□□ 1.94
TRIM3-214ENST00000536344 SMC4Q9NTJ3 1288 aa27.13■■□□□ 1.93
TRIM3-214ENST00000536344 GLIPR1L2Q4G1C9 344 aa27.12■■□□□ 1.93
TRIM3-214ENST00000536344 SSH1Q8WYL5 1049 aa27.12■■□□□ 1.93
TRIM3-214ENST00000536344 MCM10Q7L590 875 aa27.11■■□□□ 1.93
TRIM3-214ENST00000536344 PANK2Q9BZ23 570 aa27.11■■□□□ 1.93
TRIM3-214ENST00000536344 USHBP1Q8N6Y0 703 aa27.1■■□□□ 1.93
TRIM3-214ENST00000536344 TSPYL6Q8N831 410 aa27.09■■□□□ 1.93
TRIM3-214ENST00000536344 EYA1Q99502 592 aa27.09■■□□□ 1.93
TRIM3-214ENST00000536344 XRCC6P12956 609 aaKnown RBP eCLIP27.08■■□□□ 1.93
TRIM3-214ENST00000536344 DLG5Q8TDM6 1919 aa27.07■■□□□ 1.92
TRIM3-214ENST00000536344 HSP90AA2PQ14568 343 aaPredicted RBP27.07■■□□□ 1.92
TRIM3-214ENST00000536344 FLT4P35916 1363 aa27.07■■□□□ 1.92
TRIM3-214ENST00000536344 KDM4FA0A1W2PPD8 638 aa27.06■■□□□ 1.92
TRIM3-214ENST00000536344 HOXC9P31274 260 aa27.06■■□□□ 1.92
TRIM3-214ENST00000536344 MBIPQ9NS73 344 aa27.06■■□□□ 1.92
TRIM3-214ENST00000536344 GZF1Q9H116 711 aaPredicted RBP27.06■■□□□ 1.92
TRIM3-214ENST00000536344 SBNO1A3KN83 1393 aa27.06■■□□□ 1.92
TRIM3-214ENST00000536344 NCBP3Q53F19 620 aaKnown RBP27.05■■□□□ 1.92
TRIM3-214ENST00000536344 MIS18AQ9NYP9 233 aa27.05■■□□□ 1.92
TRIM3-214ENST00000536344 KRT24Q2M2I5 525 aa27.04■■□□□ 1.92
TRIM3-214ENST00000536344 IL16Q14005 1332 aa27.03■■□□□ 1.92
TRIM3-214ENST00000536344 NOB1Q9ULX3 412 aaKnown RBP27.03■■□□□ 1.92
TRIM3-214ENST00000536344 PDE3AQ14432 1141 aa27.03■■□□□ 1.92
TRIM3-214ENST00000536344 TMEM94Q12767 1356 aa27.03■■□□□ 1.92
TRIM3-214ENST00000536344 L1TD1Q5T7N2 865 aaKnown RBP27.02■■□□□ 1.92
TRIM3-214ENST00000536344 MTHFSDQ2M296 383 aaKnown RBP27.02■■□□□ 1.92
TRIM3-214ENST00000536344 IGHDP01880 384 aa27.01■■□□□ 1.91
TRIM3-214ENST00000536344 FTSJ3Q8IY81 847 aaKnown RBP27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms