RNA–Protein interactions for RNA: ENST00000536144.1

MRE11-206, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 3

Gene MRE11, Length 619 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-206ENST00000536144 TULP4Q9NRJ4 1543 aa12.68□□□□□ -0.38
MRE11-206ENST00000536144 MICALL2Q8IY33 904 aa12.68□□□□□ -0.38
MRE11-206ENST00000536144 ST20-MTHFSA0A0A6YYL1 179 aa12.67□□□□□ -0.38
MRE11-206ENST00000536144 PPP1R37O75864 691 aa12.67□□□□□ -0.38
MRE11-206ENST00000536144 SRPK2P78362 688 aaKnown RBP12.67□□□□□ -0.38
MRE11-206ENST00000536144 DDX17Q92841 729 aaKnown RBP12.67□□□□□ -0.38
MRE11-206ENST00000536144 JCADQ9P266 1359 aa12.67□□□□□ -0.38
MRE11-206ENST00000536144 PLEKHG3A1L390 1219 aa12.66□□□□□ -0.38
MRE11-206ENST00000536144 PUS7Q96PZ0 661 aaKnown RBP12.66□□□□□ -0.38
MRE11-206ENST00000536144 TESK2Q96S53 571 aa12.66□□□□□ -0.38
MRE11-206ENST00000536144 USP47Q96K76 1375 aa12.66□□□□□ -0.38
MRE11-206ENST00000536144 ATP7BP35670 1465 aa12.65□□□□□ -0.38
MRE11-206ENST00000536144 PSME1Q06323 249 aa12.65□□□□□ -0.38
MRE11-206ENST00000536144 TMEM121BQ9BXQ6 578 aaPredicted RBP12.65□□□□□ -0.38
MRE11-206ENST00000536144 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.65□□□□□ -0.38
MRE11-206ENST00000536144 COL16A1Q07092 1604 aaPredicted RBP12.65□□□□□ -0.38
MRE11-206ENST00000536144 NHSL1Q5SYE7 1610 aa12.65□□□□□ -0.38
MRE11-206ENST00000536144 USP32Q8NFA0 1604 aa12.64□□□□□ -0.39
MRE11-206ENST00000536144 KRT28Q7Z3Y7 464 aa12.64□□□□□ -0.39
MRE11-206ENST00000536144 PMFBP1Q8TBY8 1022 aa12.64□□□□□ -0.39
MRE11-206ENST00000536144 QRICH2Q9H0J4 1663 aa12.64□□□□□ -0.39
MRE11-206ENST00000536144 PHLPP1O60346 1717 aa12.63□□□□□ -0.39
MRE11-206ENST00000536144 NGDNQ8NEJ9 315 aaKnown RBP12.63□□□□□ -0.39
MRE11-206ENST00000536144 POLR3AO14802 1390 aaPredicted RBP12.63□□□□□ -0.39
MRE11-206ENST00000536144 PXDNQ92626 1479 aa12.63□□□□□ -0.39
MRE11-206ENST00000536144 KIF1AQ12756 1690 aa12.63□□□□□ -0.39
MRE11-206ENST00000536144 SPATA31A6Q5VVP1 1343 aa12.62□□□□□ -0.39
MRE11-206ENST00000536144 SBNO1A3KN83 1393 aa12.62□□□□□ -0.39
MRE11-206ENST00000536144 ATAD2Q6PL18 1390 aa12.62□□□□□ -0.39
MRE11-206ENST00000536144 GTPBP6O43824 516 aaPredicted RBP12.62□□□□□ -0.39
MRE11-206ENST00000536144 EIF4G2P78344 907 aaKnown RBP eCLIP12.61□□□□□ -0.39
MRE11-206ENST00000536144 XPCQ01831 940 aaPredicted RBP12.61□□□□□ -0.39
MRE11-206ENST00000536144 CABP1Q9NZU7 370 aa12.61□□□□□ -0.39
MRE11-206ENST00000536144 PPIP5K1Q6PFW1 1433 aa12.61□□□□□ -0.39
MRE11-206ENST00000536144 ACEP12821 1306 aa12.61□□□□□ -0.39
MRE11-206ENST00000536144 SPATA31A3Q5VYP0 1347 aa12.61□□□□□ -0.39
MRE11-206ENST00000536144 PNPLA6Q8IY17 1366 aa12.6□□□□□ -0.39
MRE11-206ENST00000536144 TMF1P82094 1093 aa12.6□□□□□ -0.39
MRE11-206ENST00000536144 CDCA8Q53HL2 280 aa12.59□□□□□ -0.39
MRE11-206ENST00000536144 BRD4O60885 1362 aaPredicted RBP12.58□□□□□ -0.4
MRE11-206ENST00000536144 RGPD8O14715 1765 aaPredicted RBP12.58□□□□□ -0.4
MRE11-206ENST00000536144 ARHGEF10O15013 1369 aa12.57□□□□□ -0.4
MRE11-206ENST00000536144 TNS3Q68CZ2 1445 aa12.57□□□□□ -0.4
MRE11-206ENST00000536144 HSPA5P11021 654 aaKnown RBP12.57□□□□□ -0.4
MRE11-206ENST00000536144 ITSN1Q15811 1721 aa12.57□□□□□ -0.4
MRE11-206ENST00000536144 SPRYD3Q8NCJ5 442 aa12.56□□□□□ -0.4
MRE11-206ENST00000536144 SHPRHQ149N8 1683 aa12.56□□□□□ -0.4
MRE11-206ENST00000536144 TOPAZ1Q8N9V7 1692 aa12.56□□□□□ -0.4
MRE11-206ENST00000536144 DISP3Q9P2K9 1392 aa12.56□□□□□ -0.4
MRE11-206ENST00000536144 NINLQ9Y2I6 1382 aa12.56□□□□□ -0.4
MRE11-206ENST00000536144 CFAP44Q96MT7 982 aa12.55□□□□□ -0.4
MRE11-206ENST00000536144 CPSF1Q10570 1443 aaKnown RBP12.54□□□□□ -0.4
MRE11-206ENST00000536144 NUTM2BA6NNL0 878 aaPredicted RBP12.54□□□□□ -0.4
MRE11-206ENST00000536144 NUTM2EB1AL46 878 aaPredicted RBP12.54□□□□□ -0.4
MRE11-206ENST00000536144 PAXIP1Q6ZW49 1069 aaPredicted RBP12.54□□□□□ -0.4
MRE11-206ENST00000536144 NUTM2AQ8IVF1 878 aaPredicted RBP12.54□□□□□ -0.4
MRE11-206ENST00000536144 TMC1Q8TDI8 760 aa12.54□□□□□ -0.4
MRE11-206ENST00000536144 SLC12A5Q9H2X9 1139 aa12.54□□□□□ -0.4
MRE11-206ENST00000536144 TERF2IPQ9NYB0 399 aa12.54□□□□□ -0.4
MRE11-206ENST00000536144 SSH2Q76I76 1423 aa12.54□□□□□ -0.4
MRE11-206ENST00000536144 LMOD2Q6P5Q4 547 aa12.53□□□□□ -0.4
MRE11-206ENST00000536144 USP6P35125 1406 aa12.53□□□□□ -0.4
MRE11-206ENST00000536144 MED1Q15648 1581 aaPredicted RBP12.52□□□□□ -0.4
MRE11-206ENST00000536144 COL22A1Q8NFW1 1626 aaPredicted RBP12.52□□□□□ -0.4
MRE11-206ENST00000536144 HDGFL2Q7Z4V5 671 aaPredicted RBP12.52□□□□□ -0.41
MRE11-206ENST00000536144 LRP6O75581 1613 aa12.51□□□□□ -0.41
MRE11-206ENST00000536144 TMEM92Q6UXU6 159 aa12.51□□□□□ -0.41
MRE11-206ENST00000536144 ABTB2Q8N961 1025 aa12.51□□□□□ -0.41
MRE11-206ENST00000536144 FAM163AQ96GL9 167 aaPredicted RBP12.51□□□□□ -0.41
MRE11-206ENST00000536144 KTN1Q86UP2 1357 aaKnown RBP12.51□□□□□ -0.41
MRE11-206ENST00000536144 TRPM3Q9HCF6 1732 aaPredicted RBP12.51□□□□□ -0.41
MRE11-206ENST00000536144 MEX3CQ5U5Q3 659 aaKnown RBP12.5□□□□□ -0.41
MRE11-206ENST00000536144 TTC21BQ7Z4L5 1316 aa12.5□□□□□ -0.41
MRE11-206ENST00000536144 TTC21AQ8NDW8 1320 aa12.5□□□□□ -0.41
MRE11-206ENST00000536144 CD163L1Q9NR16 1453 aa12.5□□□□□ -0.41
MRE11-206ENST00000536144 SNPHO15079 494 aa12.49□□□□□ -0.41
MRE11-206ENST00000536144 ADAMTS2O95450 1211 aa12.49□□□□□ -0.41
MRE11-206ENST00000536144 ZEB1P37275 1124 aaPredicted RBP12.49□□□□□ -0.41
MRE11-206ENST00000536144 NLRP13Q86W25 1043 aa12.49□□□□□ -0.41
MRE11-206ENST00000536144 TMC2Q8TDI7 906 aa12.49□□□□□ -0.41
MRE11-206ENST00000536144 CABLES1Q8TDN4 633 aa12.49□□□□□ -0.41
MRE11-206ENST00000536144 A0A1W2PP64 1363 aa12.48□□□□□ -0.41
MRE11-206ENST00000536144 ANKRD36BQ8N2N9 1353 aa12.48□□□□□ -0.41
MRE11-206ENST00000536144 HAP1P54257 671 aaPredicted RBP12.48□□□□□ -0.41
MRE11-206ENST00000536144 FNBP4Q8N3X1 1017 aaPredicted RBP12.48□□□□□ -0.41
MRE11-206ENST00000536144 RGS17Q9UGC6 210 aaPredicted RBP12.48□□□□□ -0.41
MRE11-206ENST00000536144 ALS2Q96Q42 1657 aa12.48□□□□□ -0.41
MRE11-206ENST00000536144 EDC4Q6P2E9 1401 aaKnown RBP12.47□□□□□ -0.41
MRE11-206ENST00000536144 USP19O94966 1318 aa12.47□□□□□ -0.41
MRE11-206ENST00000536144 C11orf95C9JLR9 678 aaPredicted RBP12.47□□□□□ -0.41
MRE11-206ENST00000536144 NGLY1Q96IV0 654 aa12.47□□□□□ -0.41
MRE11-206ENST00000536144 C8orf37Q96NL8 207 aa12.47□□□□□ -0.41
MRE11-206ENST00000536144 NUTM2GQ5VZR2 741 aa12.46□□□□□ -0.41
MRE11-206ENST00000536144 ZNF772Q68DY9 489 aaPredicted RBP12.46□□□□□ -0.41
MRE11-206ENST00000536144 C2orf72A6NCS6 295 aa12.45□□□□□ -0.42
MRE11-206ENST00000536144 GCP02774 474 aa12.45□□□□□ -0.42
MRE11-206ENST00000536144 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.45□□□□□ -0.42
MRE11-206ENST00000536144 USP31Q70CQ4 1352 aa12.44□□□□□ -0.42
MRE11-206ENST00000536144 AFF2P51816 1311 aa12.44□□□□□ -0.42
MRE11-206ENST00000536144 AKAP12Q02952 1782 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms