RNA–Protein interactions for RNA: ENST00000534720.1

NPIPA1-204, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

TSL 5

Gene NPIPA1, Length 1,915 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-204ENST00000534720 RUNDC1Q96C34 613 aa8.6□□□□□ -1.03
NPIPA1-204ENST00000534720 COG3Q96JB2 828 aa8.6□□□□□ -1.03
NPIPA1-204ENST00000534720 STRCP1A6NGW2 1772 aa8.6□□□□□ -1.03
NPIPA1-204ENST00000534720 PIK3C2AO00443 1686 aa8.6□□□□□ -1.03
NPIPA1-204ENST00000534720 CDK12Q9NYV4 1490 aaPredicted RBP8.59□□□□□ -1.03
NPIPA1-204ENST00000534720 TTC21AQ8NDW8 1320 aa8.59□□□□□ -1.03
NPIPA1-204ENST00000534720 APAF1O14727 1248 aa8.59□□□□□ -1.03
NPIPA1-204ENST00000534720 POLKQ9UBT6 870 aa8.59□□□□□ -1.03
NPIPA1-204ENST00000534720 OVOS2A0A0J9YW53 1432 aa8.59□□□□□ -1.03
NPIPA1-204ENST00000534720 OVOS2Q6IE36 1432 aa8.59□□□□□ -1.03
NPIPA1-204ENST00000534720 MYT1Q01538 1121 aa8.58□□□□□ -1.04
NPIPA1-204ENST00000534720 CDCA7LQ96GN5 454 aa8.58□□□□□ -1.04
NPIPA1-204ENST00000534720 STRCQ7RTU9 1775 aa8.58□□□□□ -1.04
NPIPA1-204ENST00000534720 LRRC7Q96NW7 1537 aa8.58□□□□□ -1.04
NPIPA1-204ENST00000534720 DIAPH1O60610 1272 aaKnown RBP8.58□□□□□ -1.04
NPIPA1-204ENST00000534720 GOLGA2Q08379 1002 aa8.58□□□□□ -1.04
NPIPA1-204ENST00000534720 TSPYL2Q9H2G4 693 aaPredicted RBP8.58□□□□□ -1.04
NPIPA1-204ENST00000534720 DLG5Q8TDM6 1919 aa8.57□□□□□ -1.04
NPIPA1-204ENST00000534720 U2AF1L5P0DN76 240 aaPredicted RBP8.57□□□□□ -1.04
NPIPA1-204ENST00000534720 U2AF1Q01081 240 aaKnown RBP eCLIP8.57□□□□□ -1.04
NPIPA1-204ENST00000534720 NGDNQ8NEJ9 315 aaKnown RBP8.57□□□□□ -1.04
NPIPA1-204ENST00000534720 PMFBP1Q8TBY8 1022 aa8.57□□□□□ -1.04
NPIPA1-204ENST00000534720 ZRANB1Q9UGI0 708 aa8.57□□□□□ -1.04
NPIPA1-204ENST00000534720 USP31Q70CQ4 1352 aa8.57□□□□□ -1.04
NPIPA1-204ENST00000534720 PEAK1Q9H792 1746 aa8.57□□□□□ -1.04
NPIPA1-204ENST00000534720 KIF1AQ12756 1690 aa8.57□□□□□ -1.04
NPIPA1-204ENST00000534720 CHRM1P11229 460 aaPredicted RBP8.56□□□□□ -1.04
NPIPA1-204ENST00000534720 RNF25Q96BH1 459 aaPredicted RBP8.56□□□□□ -1.04
NPIPA1-204ENST00000534720 PNNQ9H307 717 aaKnown RBP8.56□□□□□ -1.04
NPIPA1-204ENST00000534720 XIRP1Q702N8 1843 aaKnown RBP8.56□□□□□ -1.04
NPIPA1-204ENST00000534720 SLFN5Q08AF3 891 aa8.56□□□□□ -1.04
NPIPA1-204ENST00000534720 CCDC27Q2M243 656 aa8.56□□□□□ -1.04
NPIPA1-204ENST00000534720 DUSP27Q5VZP5 1158 aa8.56□□□□□ -1.04
NPIPA1-204ENST00000534720 TRMT2AQ8IZ69 625 aaKnown RBP8.56□□□□□ -1.04
NPIPA1-204ENST00000534720 TCP11L2Q8N4U5 519 aa8.56□□□□□ -1.04
NPIPA1-204ENST00000534720 RCAN3Q9UKA8 241 aa8.56□□□□□ -1.04
NPIPA1-204ENST00000534720 LTN1O94822 1766 aa8.55□□□□□ -1.04
NPIPA1-204ENST00000534720 KDM4FA0A1W2PPD8 638 aa8.55□□□□□ -1.04
NPIPA1-204ENST00000534720 HAX1O00165 279 aa8.55□□□□□ -1.04
NPIPA1-204ENST00000534720 U2SURPO15042 1029 aaKnown RBP8.55□□□□□ -1.04
NPIPA1-204ENST00000534720 FBLN1P23142 703 aa8.55□□□□□ -1.04
NPIPA1-204ENST00000534720 PLEKHF1Q96S99 279 aa8.55□□□□□ -1.04
NPIPA1-204ENST00000534720 DAXXQ9UER7 740 aaPredicted RBP8.55□□□□□ -1.04
NPIPA1-204ENST00000534720 EMILIN1Q9Y6C2 1016 aa8.55□□□□□ -1.04
NPIPA1-204ENST00000534720 RGPD1P0DJD0 1748 aa8.55□□□□□ -1.04
NPIPA1-204ENST00000534720 NCOA3Q9Y6Q9 1424 aa8.55□□□□□ -1.04
NPIPA1-204ENST00000534720 E9PSI1 815 aa8.54□□□□□ -1.04
NPIPA1-204ENST00000534720 PYGBP11216 843 aa8.54□□□□□ -1.04
NPIPA1-204ENST00000534720 IRX6P78412 446 aaPredicted RBP8.54□□□□□ -1.04
NPIPA1-204ENST00000534720 PROSER2Q86WR7 435 aaPredicted RBP8.54□□□□□ -1.04
NPIPA1-204ENST00000534720 WWC1Q8IX03 1113 aa8.54□□□□□ -1.04
NPIPA1-204ENST00000534720 PHF8Q9UPP1 1060 aa8.54□□□□□ -1.04
NPIPA1-204ENST00000534720 LMTK3Q96Q04 1460 aa8.54□□□□□ -1.04
NPIPA1-204ENST00000534720 PPM1GO15355 546 aaPredicted RBP8.54□□□□□ -1.04
NPIPA1-204ENST00000534720 FCHSD2O94868 740 aa8.54□□□□□ -1.04
NPIPA1-204ENST00000534720 TRPM3Q9HCF6 1732 aaPredicted RBP8.53□□□□□ -1.04
NPIPA1-204ENST00000534720 IL13P35225 146 aa8.53□□□□□ -1.04
NPIPA1-204ENST00000534720 WDR63Q8IWG1 891 aa8.53□□□□□ -1.04
NPIPA1-204ENST00000534720 MAPK8IP3Q9UPT6 1336 aa8.53□□□□□ -1.04
NPIPA1-204ENST00000534720 PAK3O75914 559 aaPredicted RBP8.52□□□□□ -1.04
NPIPA1-204ENST00000534720 RRP1P56182 461 aaKnown RBP8.52□□□□□ -1.04
NPIPA1-204ENST00000534720 RRS1Q15050 365 aaKnown RBP8.52□□□□□ -1.04
NPIPA1-204ENST00000534720 C14orf37Q86TY3 774 aa8.52□□□□□ -1.04
NPIPA1-204ENST00000534720 RBM33Q96EV2 1170 aaKnown RBP8.52□□□□□ -1.04
NPIPA1-204ENST00000534720 PPP4R2Q9NY27 417 aa8.52□□□□□ -1.04
NPIPA1-204ENST00000534720 NEUROD2Q15784 382 aa8.52□□□□□ -1.05
NPIPA1-204ENST00000534720 RSPH6AQ9H0K4 717 aa8.52□□□□□ -1.05
NPIPA1-204ENST00000534720 DCCP43146 1447 aa8.52□□□□□ -1.05
NPIPA1-204ENST00000534720 PHRF1Q9P1Y6 1649 aaKnown RBP8.51□□□□□ -1.05
NPIPA1-204ENST00000534720 TMPOP42166 694 aaKnown RBP8.51□□□□□ -1.05
NPIPA1-204ENST00000534720 HSPA2P54652 639 aa8.51□□□□□ -1.05
NPIPA1-204ENST00000534720 ESCO1Q5FWF5 840 aa8.51□□□□□ -1.05
NPIPA1-204ENST00000534720 C19orf44Q9H6X5 657 aa8.51□□□□□ -1.05
NPIPA1-204ENST00000534720 RRP7AQ9Y3A4 280 aaKnown RBP8.51□□□□□ -1.05
NPIPA1-204ENST00000534720 SBNO1A3KN83 1393 aa8.51□□□□□ -1.05
NPIPA1-204ENST00000534720 KIF24Q5T7B8 1368 aa8.51□□□□□ -1.05
NPIPA1-204ENST00000534720 RIOK3O14730 519 aaKnown RBP8.5□□□□□ -1.05
NPIPA1-204ENST00000534720 NEFMP07197 916 aa8.5□□□□□ -1.05
NPIPA1-204ENST00000534720 C1orf167Q5SNV9 1468 aa8.5□□□□□ -1.05
NPIPA1-204ENST00000534720 ALS2Q96Q42 1657 aa8.5□□□□□ -1.05
NPIPA1-204ENST00000534720 CD44P16070 742 aaKnown RBP8.5□□□□□ -1.05
NPIPA1-204ENST00000534720 NLRP6P59044 892 aa8.5□□□□□ -1.05
NPIPA1-204ENST00000534720 ABTB2Q8N961 1025 aa8.5□□□□□ -1.05
NPIPA1-204ENST00000534720 FLT4P35916 1363 aa8.49□□□□□ -1.05
NPIPA1-204ENST00000534720 TMEM94Q12767 1356 aa8.49□□□□□ -1.05
NPIPA1-204ENST00000534720 PRKAR2BP31323 418 aa8.49□□□□□ -1.05
NPIPA1-204ENST00000534720 EIF4A2Q14240 407 aaKnown RBP8.49□□□□□ -1.05
NPIPA1-204ENST00000534720 MAP3K19Q56UN5 1328 aa8.49□□□□□ -1.05
NPIPA1-204ENST00000534720 NFAT5O94916 1531 aa8.49□□□□□ -1.05
NPIPA1-204ENST00000534720 MST1RQ04912 1400 aa8.49□□□□□ -1.05
NPIPA1-204ENST00000534720 RIPK4P57078 832 aa8.48□□□□□ -1.05
NPIPA1-204ENST00000534720 PSME1Q06323 249 aa8.48□□□□□ -1.05
NPIPA1-204ENST00000534720 TRIM35Q9UPQ4 493 aa8.48□□□□□ -1.05
NPIPA1-204ENST00000534720 IL16Q14005 1332 aa8.48□□□□□ -1.05
NPIPA1-204ENST00000534720 SLIT3O75094 1523 aa8.48□□□□□ -1.05
NPIPA1-204ENST00000534720 HMOX1P09601 288 aa8.48□□□□□ -1.05
NPIPA1-204ENST00000534720 ORAI2Q96SN7 254 aa8.48□□□□□ -1.05
NPIPA1-204ENST00000534720 MYH16Q9H6N6 1097 aa8.48□□□□□ -1.05
NPIPA1-204ENST00000534720 ATF3P18847 181 aa8.47□□□□□ -1.05
NPIPA1-204ENST00000534720 NFE2L2Q16236 605 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms