RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 PCDHB15Q9Y5E8 787 aa8.35□□□□□ -1.07
CHKA-208ENST00000533910 ARHGEF12Q9NZN5 1544 aa8.34□□□□□ -1.07
CHKA-208ENST00000533910 QPCTQ16769 361 aa8.34□□□□□ -1.07
CHKA-208ENST00000533910 INO80Q9ULG1 1556 aaPredicted RBP8.34□□□□□ -1.07
CHKA-208ENST00000533910 KDM5DQ9BY66 1539 aa8.34□□□□□ -1.08
CHKA-208ENST00000533910 ACIN1Q9UKV3 1341 aaKnown RBP8.33□□□□□ -1.08
CHKA-208ENST00000533910 DENND4BO75064 1496 aaPredicted RBP8.33□□□□□ -1.08
CHKA-208ENST00000533910 MAP3K4Q9Y6R4 1608 aa8.33□□□□□ -1.08
CHKA-208ENST00000533910 GLI2P10070 1586 aa8.33□□□□□ -1.08
CHKA-208ENST00000533910 DNAJB2P25686 324 aa8.33□□□□□ -1.08
CHKA-208ENST00000533910 NUTM1Q86Y26 1132 aa8.33□□□□□ -1.08
CHKA-208ENST00000533910 CCDC82Q8N4S0 544 aa8.33□□□□□ -1.08
CHKA-208ENST00000533910 RDH13Q8NBN7 331 aa8.33□□□□□ -1.08
CHKA-208ENST00000533910 TMEM134Q9H6X4 195 aa8.33□□□□□ -1.08
CHKA-208ENST00000533910 ZFYVE16Q7Z3T8 1539 aa8.33□□□□□ -1.08
CHKA-208ENST00000533910 ANKRD30AQ9BXX3 1397 aa8.33□□□□□ -1.08
CHKA-208ENST00000533910 RSPH4AQ5TD94 716 aa8.32□□□□□ -1.08
CHKA-208ENST00000533910 RSBN1LQ6PCB5 846 aaPredicted RBP8.32□□□□□ -1.08
CHKA-208ENST00000533910 SAMD7Q7Z3H4 446 aa8.32□□□□□ -1.08
CHKA-208ENST00000533910 CABLES1Q8TDN4 633 aa8.32□□□□□ -1.08
CHKA-208ENST00000533910 IRX2Q9BZI1 471 aaPredicted RBP8.32□□□□□ -1.08
CHKA-208ENST00000533910 COG6Q9Y2V7 657 aa8.32□□□□□ -1.08
CHKA-208ENST00000533910 FANCAO15360 1455 aa8.32□□□□□ -1.08
CHKA-208ENST00000533910 UNC13BO14795 1591 aa8.31□□□□□ -1.08
CHKA-208ENST00000533910 SPTLC1O15269 473 aa8.31□□□□□ -1.08
CHKA-208ENST00000533910 RTL5Q5HYW3 569 aaPredicted RBP8.31□□□□□ -1.08
CHKA-208ENST00000533910 PROSER2Q86WR7 435 aaPredicted RBP8.31□□□□□ -1.08
CHKA-208ENST00000533910 HLA-CQ95604 372 aa8.31□□□□□ -1.08
CHKA-208ENST00000533910 RRP7BPQ9NSQ0 103 aa8.31□□□□□ -1.08
CHKA-208ENST00000533910 CHIC2Q9UKJ5 165 aa8.31□□□□□ -1.08
CHKA-208ENST00000533910 DIP2BQ9P265 1576 aa8.31□□□□□ -1.08
CHKA-208ENST00000533910 ANKRD50Q9ULJ7 1429 aa8.3□□□□□ -1.08
CHKA-208ENST00000533910 GUCA2AQ02747 115 aa8.3□□□□□ -1.08
CHKA-208ENST00000533910 EFCAB2Q5VUJ9 269 aa8.3□□□□□ -1.08
CHKA-208ENST00000533910 FNBP4Q8N3X1 1017 aaPredicted RBP8.3□□□□□ -1.08
CHKA-208ENST00000533910 NECTIN2Q92692 538 aa8.3□□□□□ -1.08
CHKA-208ENST00000533910 PZPP20742 1482 aa8.3□□□□□ -1.08
CHKA-208ENST00000533910 DUOX2Q9NRD8 1548 aa8.29□□□□□ -1.08
CHKA-208ENST00000533910 SULF1Q8IWU6 871 aa8.29□□□□□ -1.08
CHKA-208ENST00000533910 KIF15Q9NS87 1388 aa8.29□□□□□ -1.08
CHKA-208ENST00000533910 MAGI2Q86UL8 1455 aa8.29□□□□□ -1.08
CHKA-208ENST00000533910 KDM5CP41229 1560 aa8.29□□□□□ -1.08
CHKA-208ENST00000533910 RTEL1-TNFRSF6BF6WH68 1400 aa8.29□□□□□ -1.08
CHKA-208ENST00000533910 TRAPPC8Q9Y2L5 1435 aa8.29□□□□□ -1.08
CHKA-208ENST00000533910 ADGRL1O94910 1474 aa8.28□□□□□ -1.08
CHKA-208ENST00000533910 SPDYE5A6NIY4 337 aa8.28□□□□□ -1.08
CHKA-208ENST00000533910 AP1G2O75843 785 aa8.28□□□□□ -1.08
CHKA-208ENST00000533910 SLC10A3P09131 477 aa8.28□□□□□ -1.08
CHKA-208ENST00000533910 SLC4A3P48751 1232 aa8.28□□□□□ -1.08
CHKA-208ENST00000533910 HNRNPMP52272 730 aaKnown RBP eCLIP8.28□□□□□ -1.086e-7■■■■□ 23.7
CHKA-208ENST00000533910 DIXDC1Q155Q3 683 aa8.28□□□□□ -1.08
CHKA-208ENST00000533910 PPP2R2DQ66LE6 453 aa8.28□□□□□ -1.08
CHKA-208ENST00000533910 MTMR14Q8NCE2 650 aa8.28□□□□□ -1.08
CHKA-208ENST00000533910 DEPDC5O75140 1603 aa8.28□□□□□ -1.08
CHKA-208ENST00000533910 EIF2AK4Q9P2K8 1649 aaKnown RBP8.28□□□□□ -1.08
CHKA-208ENST00000533910 ATP7AQ04656 1500 aa8.28□□□□□ -1.08
CHKA-208ENST00000533910 ERBINQ96RT1 1412 aa8.28□□□□□ -1.08
CHKA-208ENST00000533910 NEO1Q92859 1461 aa8.27□□□□□ -1.09
CHKA-208ENST00000533910 RAD21O60216 631 aa8.27□□□□□ -1.09
CHKA-208ENST00000533910 RNF40O75150 1001 aa8.27□□□□□ -1.09
CHKA-208ENST00000533910 SWT1Q5T5J6 900 aaKnown RBP8.27□□□□□ -1.09
CHKA-208ENST00000533910 GDPD2Q9HCC8 539 aa8.27□□□□□ -1.09
CHKA-208ENST00000533910 IQGAP3Q86VI3 1631 aa8.27□□□□□ -1.09
CHKA-208ENST00000533910 CD109Q6YHK3 1445 aa8.27□□□□□ -1.09
CHKA-208ENST00000533910 PPRC1Q5VV67 1664 aaKnown RBP8.27□□□□□ -1.09
CHKA-208ENST00000533910 KIDINS220Q9ULH0 1771 aa8.26□□□□□ -1.09
CHKA-208ENST00000533910 LILRB3O75022 631 aa8.26□□□□□ -1.09
CHKA-208ENST00000533910 TSPY4P0CV99 314 aa8.26□□□□□ -1.09
CHKA-208ENST00000533910 TSPY10P0CW01 314 aa8.26□□□□□ -1.09
CHKA-208ENST00000533910 BANK1Q8NDB2 785 aa8.26□□□□□ -1.09
CHKA-208ENST00000533910 POGZQ7Z3K3 1410 aa8.26□□□□□ -1.09
CHKA-208ENST00000533910 HECW2Q9P2P5 1572 aa8.26□□□□□ -1.09
CHKA-208ENST00000533910 RICTORQ6R327 1708 aa8.26□□□□□ -1.09
CHKA-208ENST00000533910 ZNF518AQ6AHZ1 1483 aa8.26□□□□□ -1.09
CHKA-208ENST00000533910 KIF13AQ9H1H9 1805 aa8.25□□□□□ -1.09
CHKA-208ENST00000533910 NUTM2BA6NNL0 878 aaPredicted RBP8.25□□□□□ -1.09
CHKA-208ENST00000533910 NUTM2EB1AL46 878 aaPredicted RBP8.25□□□□□ -1.09
CHKA-208ENST00000533910 KDM4AO75164 1064 aa8.25□□□□□ -1.09
CHKA-208ENST00000533910 TMEM259Q4ZIN3 620 aa8.25□□□□□ -1.09
CHKA-208ENST00000533910 NUTM2DQ5VT03 806 aaPredicted RBP8.25□□□□□ -1.09
CHKA-208ENST00000533910 NUTM2AQ8IVF1 878 aaPredicted RBP8.25□□□□□ -1.09
CHKA-208ENST00000533910 PCDHGC3Q9UN70 934 aa8.25□□□□□ -1.09
CHKA-208ENST00000533910 BCORL1Q5H9F3 1711 aa8.25□□□□□ -1.09
CHKA-208ENST00000533910 FAM135AQ9P2D6 1515 aa8.24□□□□□ -1.09
CHKA-208ENST00000533910 SCAPERQ9BY12 1400 aa8.24□□□□□ -1.09
CHKA-208ENST00000533910 GCGRP47871 477 aa8.24□□□□□ -1.09
CHKA-208ENST00000533910 CYB5RLQ6IPT4 315 aa8.24□□□□□ -1.09
CHKA-208ENST00000533910 SLF2Q8IX21 1173 aa8.24□□□□□ -1.09
CHKA-208ENST00000533910 IL21Q9HBE4 155 aa8.24□□□□□ -1.09
CHKA-208ENST00000533910 FRMPD1Q5SYB0 1578 aa8.23□□□□□ -1.09
CHKA-208ENST00000533910 HOXA2O43364 376 aa8.23□□□□□ -1.09
CHKA-208ENST00000533910 ABL2P42684 1182 aa8.23□□□□□ -1.09
CHKA-208ENST00000533910 TJAP1Q5JTD0 557 aa8.23□□□□□ -1.09
CHKA-208ENST00000533910 TBC1D2BQ9UPU7 963 aa8.23□□□□□ -1.09
CHKA-208ENST00000533910 ZNF330Q9Y3S2 320 aaPredicted RBP8.23□□□□□ -1.09
CHKA-208ENST00000533910 PRDM15P57071 1507 aaPredicted RBP8.23□□□□□ -1.09
CHKA-208ENST00000533910 ANKRD30BQ9BXX2 1392 aa8.22□□□□□ -1.09
CHKA-208ENST00000533910 VWDEQ8N2E2 1590 aa8.22□□□□□ -1.09
CHKA-208ENST00000533910 ABCA6Q8N139 1617 aa8.22□□□□□ -1.09
CHKA-208ENST00000533910 MROH1Q8NDA8 1641 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms