RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 TRPM2O94759 1503 aa13.68□□□□□ -0.22
AMBRA1-211ENST00000533727 GNAI2P04899 355 aa13.68□□□□□ -0.22
AMBRA1-211ENST00000533727 MPHOSPH8Q99549 860 aa13.68□□□□□ -0.22
AMBRA1-211ENST00000533727 MAPKBP1O60336 1514 aa13.68□□□□□ -0.22
AMBRA1-211ENST00000533727 MAGI2Q86UL8 1455 aa13.68□□□□□ -0.22
AMBRA1-211ENST00000533727 IFNL2Q8IZJ0 200 aa13.68□□□□□ -0.22
AMBRA1-211ENST00000533727 NCKAP5LQ9HCH0 1330 aa13.68□□□□□ -0.22
AMBRA1-211ENST00000533727 KCNA6P17658 529 aa13.67□□□□□ -0.22
AMBRA1-211ENST00000533727 HSPA2P54652 639 aa13.67□□□□□ -0.22
AMBRA1-211ENST00000533727 EXOSC9Q06265 439 aaKnown RBP13.67□□□□□ -0.22
AMBRA1-211ENST00000533727 TRIM29Q14134 588 aa13.67□□□□□ -0.22
AMBRA1-211ENST00000533727 FAM184AQ8NB25 1140 aa13.67□□□□□ -0.22
AMBRA1-211ENST00000533727 CCDC158Q5M9N0 1113 aa13.67□□□□□ -0.22
AMBRA1-211ENST00000533727 ATP6V1DQ9Y5K8 247 aa13.67□□□□□ -0.22
AMBRA1-211ENST00000533727 CFAP43Q8NDM7 1665 aa13.67□□□□□ -0.22
AMBRA1-211ENST00000533727 A0A087WZG4 1122 aa13.67□□□□□ -0.22
AMBRA1-211ENST00000533727 SLC4A2P04920 1241 aa13.66□□□□□ -0.22
AMBRA1-211ENST00000533727 CCDC27Q2M243 656 aa13.66□□□□□ -0.22
AMBRA1-211ENST00000533727 CCDC57Q2TAC2 916 aa13.66□□□□□ -0.22
AMBRA1-211ENST00000533727 CRBNQ96SW2 442 aa13.66□□□□□ -0.22
AMBRA1-211ENST00000533727 RALYLQ86SE5 291 aaKnown RBP13.66□□□□□ -0.22
AMBRA1-211ENST00000533727 SMARCC1Q92922 1105 aaPredicted RBP13.66□□□□□ -0.22
AMBRA1-211ENST00000533727 DHX16O60231 1041 aaKnown RBP13.65□□□□□ -0.22
AMBRA1-211ENST00000533727 TAF7Q15545 349 aaPredicted RBP13.65□□□□□ -0.22
AMBRA1-211ENST00000533727 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.65□□□□□ -0.222e-6■■■■■ 28.2
AMBRA1-211ENST00000533727 PLIN1O60240 522 aa13.65□□□□□ -0.22
AMBRA1-211ENST00000533727 WASHC4Q2M389 1173 aa13.65□□□□□ -0.22
AMBRA1-211ENST00000533727 CPLX1O14810 134 aa13.65□□□□□ -0.22
AMBRA1-211ENST00000533727 RAD21O60216 631 aa13.65□□□□□ -0.22
AMBRA1-211ENST00000533727 INTS3Q68E01 1043 aaKnown RBP13.65□□□□□ -0.22
AMBRA1-211ENST00000533727 SURF6O75683 361 aaKnown RBP13.65□□□□□ -0.22
AMBRA1-211ENST00000533727 IGHMBP2P38935 993 aaKnown RBP13.65□□□□□ -0.22
AMBRA1-211ENST00000533727 SF3A1Q15459 793 aaKnown RBP13.65□□□□□ -0.22
AMBRA1-211ENST00000533727 H3BQV1 296 aa13.64□□□□□ -0.23
AMBRA1-211ENST00000533727 IFFO2Q5TF58 517 aa13.64□□□□□ -0.23
AMBRA1-211ENST00000533727 EIF2AK4Q9P2K8 1649 aaKnown RBP13.64□□□□□ -0.23
AMBRA1-211ENST00000533727 CNTROBQ8N137 903 aa13.64□□□□□ -0.23
AMBRA1-211ENST00000533727 FMNL2Q96PY5 1086 aa13.64□□□□□ -0.23
AMBRA1-211ENST00000533727 ZSCAN25Q6NSZ9 544 aa13.64□□□□□ -0.23
AMBRA1-211ENST00000533727 CDCA7Q9BWT1 371 aaPredicted RBP13.64□□□□□ -0.23
AMBRA1-211ENST00000533727 ANKRD24Q8TF21 1146 aa13.64□□□□□ -0.23
AMBRA1-211ENST00000533727 SAMD9Q5K651 1589 aa13.63□□□□□ -0.23
AMBRA1-211ENST00000533727 PDE3AQ14432 1141 aa13.63□□□□□ -0.23
AMBRA1-211ENST00000533727 SART3Q15020 963 aaKnown RBP13.63□□□□□ -0.23
AMBRA1-211ENST00000533727 LARP1Q6PKG0 1096 aaKnown RBP13.63□□□□□ -0.23
AMBRA1-211ENST00000533727 AK7Q96M32 723 aa13.63□□□□□ -0.23
AMBRA1-211ENST00000533727 MYL6BP14649 208 aa13.62□□□□□ -0.23
AMBRA1-211ENST00000533727 IFT57Q9NWB7 429 aa13.62□□□□□ -0.23
AMBRA1-211ENST00000533727 TMPOP42166 694 aaKnown RBP13.62□□□□□ -0.23
AMBRA1-211ENST00000533727 NFXL1Q6ZNB6 911 aa13.62□□□□□ -0.23
AMBRA1-211ENST00000533727 TTC39AQ5SRH9 613 aa13.62□□□□□ -0.23
AMBRA1-211ENST00000533727 FAM161AQ3B820 660 aa13.61□□□□□ -0.23
AMBRA1-211ENST00000533727 ANO2Q9NQ90 1003 aa13.61□□□□□ -0.23
AMBRA1-211ENST00000533727 GCC1Q96CN9 775 aa13.61□□□□□ -0.23
AMBRA1-211ENST00000533727 PPIP5K1Q6PFW1 1433 aa13.61□□□□□ -0.23
AMBRA1-211ENST00000533727 CEP126Q9P2H0 1117 aa13.61□□□□□ -0.23
AMBRA1-211ENST00000533727 FSD1Q9BTV5 496 aa13.6□□□□□ -0.23
AMBRA1-211ENST00000533727 TMOD2Q9NZR1 351 aa13.6□□□□□ -0.23
AMBRA1-211ENST00000533727 ADGRL2O95490 1459 aa13.6□□□□□ -0.23
AMBRA1-211ENST00000533727 MPRIPQ6WCQ1 1025 aa13.6□□□□□ -0.23
AMBRA1-211ENST00000533727 CCDC47Q96A33 483 aaKnown RBP13.6□□□□□ -0.23
AMBRA1-211ENST00000533727 DDX11L8A8MPP1 907 aa13.6□□□□□ -0.23
AMBRA1-211ENST00000533727 EXOC6Q8TAG9 804 aa13.6□□□□□ -0.23
AMBRA1-211ENST00000533727 BCL11BQ9C0K0 894 aaPredicted RBP13.6□□□□□ -0.23
AMBRA1-211ENST00000533727 NACAP1Q9BZK3 213 aa13.6□□□□□ -0.23
AMBRA1-211ENST00000533727 C8orf37Q96NL8 207 aa13.59□□□□□ -0.23
AMBRA1-211ENST00000533727 DNAJC5Q9H3Z4 198 aa13.59□□□□□ -0.23
AMBRA1-211ENST00000533727 PTCD1O75127 700 aaKnown RBP13.59□□□□□ -0.23
AMBRA1-211ENST00000533727 PDE4AP27815 886 aa13.59□□□□□ -0.23
AMBRA1-211ENST00000533727 DNMT1P26358 1616 aaKnown RBP13.59□□□□□ -0.23
AMBRA1-211ENST00000533727 NBPF14Q5TI25 921 aa13.59□□□□□ -0.23
AMBRA1-211ENST00000533727 CCAR1Q8IX12 1150 aaKnown RBP13.59□□□□□ -0.23
AMBRA1-211ENST00000533727 HYPKQ9NX55 129 aa13.59□□□□□ -0.23
AMBRA1-211ENST00000533727 XBP1P17861 261 aa13.59□□□□□ -0.23
AMBRA1-211ENST00000533727 PSMA5P28066 241 aa13.59□□□□□ -0.23
AMBRA1-211ENST00000533727 SAFBQ15424 915 aaKnown RBP eCLIP13.59□□□□□ -0.23
AMBRA1-211ENST00000533727 DDB1Q16531 1140 aa13.58□□□□□ -0.24
AMBRA1-211ENST00000533727 ZCRB1Q8TBF4 217 aaKnown RBP13.58□□□□□ -0.24
AMBRA1-211ENST00000533727 EMILIN1Q9Y6C2 1016 aa13.58□□□□□ -0.24
AMBRA1-211ENST00000533727 MAST1Q9Y2H9 1570 aa13.58□□□□□ -0.24
AMBRA1-211ENST00000533727 RALGAPBQ86X10 1494 aa13.58□□□□□ -0.24
AMBRA1-211ENST00000533727 C11orf95C9JLR9 678 aaPredicted RBP13.58□□□□□ -0.24
AMBRA1-211ENST00000533727 WDHD1O75717 1129 aaPredicted RBP13.58□□□□□ -0.24
AMBRA1-211ENST00000533727 BRMS1Q9HCU9 246 aa13.57□□□□□ -0.24
AMBRA1-211ENST00000533727 ABCA8O94911 1581 aa13.57□□□□□ -0.24
AMBRA1-211ENST00000533727 PHF14O94880 888 aa13.56□□□□□ -0.24
AMBRA1-211ENST00000533727 DBF4Q9UBU7 674 aaPredicted RBP13.56□□□□□ -0.24
AMBRA1-211ENST00000533727 AKAP2Q9Y2D5 859 aa13.56□□□□□ -0.24
AMBRA1-211ENST00000533727 ARHGEF10O15013 1369 aa13.56□□□□□ -0.24
AMBRA1-211ENST00000533727 DUSP27Q5VZP5 1158 aa13.56□□□□□ -0.24
AMBRA1-211ENST00000533727 BICDL1Q6ZP65 573 aa13.56□□□□□ -0.24
AMBRA1-211ENST00000533727 CCDC43Q96MW1 224 aaKnown RBP13.56□□□□□ -0.24
AMBRA1-211ENST00000533727 CDC45O75419 566 aa13.56□□□□□ -0.24
AMBRA1-211ENST00000533727 ATF7IPQ6VMQ6 1270 aa13.56□□□□□ -0.24
AMBRA1-211ENST00000533727 TSR2Q969E8 191 aaKnown RBP13.56□□□□□ -0.24
AMBRA1-211ENST00000533727 NOL8Q76FK4 1167 aaKnown RBP13.56□□□□□ -0.24
AMBRA1-211ENST00000533727 TMEM2Q9UHN6 1383 aa13.56□□□□□ -0.24
AMBRA1-211ENST00000533727 YTHDC2Q9H6S0 1430 aaKnown RBP13.55□□□□□ -0.24
AMBRA1-211ENST00000533727 CHRNA2Q15822 529 aa13.55□□□□□ -0.24
AMBRA1-211ENST00000533727 RPGRQ92834 1020 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms