RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 SMC2O95347 1197 aa8.33□□□□□ -1.08
CTNND1-236ENST00000533667 PAXIP1Q6ZW49 1069 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-236ENST00000533667 IL27Q8NEV9 243 aa8.33□□□□□ -1.08
CTNND1-236ENST00000533667 FCHSD2O94868 740 aa8.32□□□□□ -1.08
CTNND1-236ENST00000533667 SLC4A2P04920 1241 aa8.32□□□□□ -1.08
CTNND1-236ENST00000533667 FOSBP53539 338 aa8.32□□□□□ -1.08
CTNND1-236ENST00000533667 NBPF1Q3BBV0 1214 aa8.32□□□□□ -1.08
CTNND1-236ENST00000533667 NBPF8Q3BBV2 869 aa8.32□□□□□ -1.08
CTNND1-236ENST00000533667 HDGFL1Q5TGJ6 251 aa8.32□□□□□ -1.08
CTNND1-236ENST00000533667 FBXW7Q969H0 707 aa8.32□□□□□ -1.08
CTNND1-236ENST00000533667 PDCL3Q9H2J4 239 aa8.32□□□□□ -1.08
CTNND1-236ENST00000533667 CCDC27Q2M243 656 aa8.32□□□□□ -1.08
CTNND1-236ENST00000533667 ZSCAN25Q6NSZ9 544 aa8.32□□□□□ -1.08
CTNND1-236ENST00000533667 ABTB2Q8N961 1025 aa8.32□□□□□ -1.08
CTNND1-236ENST00000533667 BCAR3O75815 825 aa8.32□□□□□ -1.08
CTNND1-236ENST00000533667 KRT32Q14532 448 aa8.32□□□□□ -1.08
CTNND1-236ENST00000533667 ODF2Q5BJF6 829 aa8.32□□□□□ -1.08
CTNND1-236ENST00000533667 RRP12Q5JTH9 1297 aaKnown RBP8.32□□□□□ -1.08
CTNND1-236ENST00000533667 PRAM1Q96QH2 718 aa8.32□□□□□ -1.08
CTNND1-236ENST00000533667 BCL11BQ9C0K0 894 aaPredicted RBP8.32□□□□□ -1.08
CTNND1-236ENST00000533667 LUC7LQ9NQ29 371 aaKnown RBP8.32□□□□□ -1.08
CTNND1-236ENST00000533667 GNL3LQ9NVN8 582 aaKnown RBP8.32□□□□□ -1.08
CTNND1-236ENST00000533667 IFT140Q96RY7 1462 aa8.32□□□□□ -1.08
CTNND1-236ENST00000533667 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.32□□□□□ -1.08
CTNND1-236ENST00000533667 FIBPO43427 364 aa8.32□□□□□ -1.08
CTNND1-236ENST00000533667 CBFA2T2O43439 604 aa8.32□□□□□ -1.08
CTNND1-236ENST00000533667 SSR1P43307 286 aaKnown RBP8.32□□□□□ -1.08
CTNND1-236ENST00000533667 AFAP1Q8N556 730 aa8.32□□□□□ -1.08
CTNND1-236ENST00000533667 DNAJC2Q99543 621 aaKnown RBP8.32□□□□□ -1.08
CTNND1-236ENST00000533667 TRIM22Q8IYM9 498 aa8.31□□□□□ -1.08
CTNND1-236ENST00000533667 GRPEL1Q9HAV7 217 aa8.31□□□□□ -1.08
CTNND1-236ENST00000533667 POLA1P09884 1462 aaPredicted RBP8.31□□□□□ -1.08
CTNND1-236ENST00000533667 MSH5O43196 834 aa8.31□□□□□ -1.08
CTNND1-236ENST00000533667 TATP17735 454 aaPredicted RBP8.31□□□□□ -1.08
CTNND1-236ENST00000533667 NACAP1Q9BZK3 213 aa8.31□□□□□ -1.08
CTNND1-236ENST00000533667 ZNHIT6Q9NWK9 470 aaKnown RBP8.31□□□□□ -1.08
CTNND1-236ENST00000533667 PRG4Q92954 1404 aaPredicted RBP8.31□□□□□ -1.08
CTNND1-236ENST00000533667 CDKL5O76039 1030 aa8.31□□□□□ -1.08
CTNND1-236ENST00000533667 TNMDQ9H2S6 317 aa8.31□□□□□ -1.08
CTNND1-236ENST00000533667 CFAP45Q9UL16 551 aa8.31□□□□□ -1.08
CTNND1-236ENST00000533667 PPP6R1Q9UPN7 881 aa8.31□□□□□ -1.08
CTNND1-236ENST00000533667 ABCC11Q96J66 1382 aa8.31□□□□□ -1.08
CTNND1-236ENST00000533667 TTC39AQ5SRH9 613 aa8.3□□□□□ -1.08
CTNND1-236ENST00000533667 TSR2Q969E8 191 aaKnown RBP8.3□□□□□ -1.08
CTNND1-236ENST00000533667 SLC12A5Q9H2X9 1139 aa8.3□□□□□ -1.08
CTNND1-236ENST00000533667 CTNNA3Q9UI47 895 aa8.3□□□□□ -1.08
CTNND1-236ENST00000533667 SLFN5Q08AF3 891 aa8.3□□□□□ -1.08
CTNND1-236ENST00000533667 STIM1Q13586 685 aa8.3□□□□□ -1.08
CTNND1-236ENST00000533667 CDK5RAP3Q96JB5 506 aa8.3□□□□□ -1.08
CTNND1-236ENST00000533667 CDK19Q9BWU1 502 aa8.3□□□□□ -1.08
CTNND1-236ENST00000533667 CCDC141Q6ZP82 1450 aa8.3□□□□□ -1.08
CTNND1-236ENST00000533667 MCM4P33991 863 aa8.3□□□□□ -1.08
CTNND1-236ENST00000533667 SULT6B1Q6IMI4 303 aa8.3□□□□□ -1.08
CTNND1-236ENST00000533667 RTEL1-TNFRSF6BF6WH68 1400 aa8.3□□□□□ -1.08
CTNND1-236ENST00000533667 CCAR1Q8IX12 1150 aaKnown RBP8.29□□□□□ -1.08
CTNND1-236ENST00000533667 C1orf115Q9H7X2 142 aa8.29□□□□□ -1.08
CTNND1-236ENST00000533667 BLOC1S2Q6QNY1 142 aa8.29□□□□□ -1.08
CTNND1-236ENST00000533667 TXNDC2Q86VQ3 553 aa8.29□□□□□ -1.08
CTNND1-236ENST00000533667 MRC2Q9UBG0 1479 aa8.29□□□□□ -1.08
CTNND1-236ENST00000533667 LARP1BQ659C4 914 aaKnown RBP8.29□□□□□ -1.08
CTNND1-236ENST00000533667 PPFIBP1Q86W92 1011 aa8.29□□□□□ -1.08
CTNND1-236ENST00000533667 CCDC191Q8NCU4 936 aa8.29□□□□□ -1.08
CTNND1-236ENST00000533667 CCDC112Q8NEF3 446 aa8.29□□□□□ -1.08
CTNND1-236ENST00000533667 ERLIN1O75477 346 aa8.29□□□□□ -1.08
CTNND1-236ENST00000533667 SERPINC1P01008 464 aa8.29□□□□□ -1.08
CTNND1-236ENST00000533667 HSP90AB2PQ58FF8 381 aa8.29□□□□□ -1.08
CTNND1-236ENST00000533667 LEKR1Q6ZMV7 388 aa8.29□□□□□ -1.08
CTNND1-236ENST00000533667 NOL7Q9UMY1 257 aaKnown RBP8.29□□□□□ -1.08
CTNND1-236ENST00000533667 SPG7Q9UQ90 795 aa8.29□□□□□ -1.08
CTNND1-236ENST00000533667 ERLIN2O94905 339 aa8.28□□□□□ -1.08
CTNND1-236ENST00000533667 NFE2L2Q16236 605 aa8.28□□□□□ -1.08
CTNND1-236ENST00000533667 ALDH1L2Q3SY69 923 aa8.28□□□□□ -1.08
CTNND1-236ENST00000533667 CEP57L1Q8IYX8 460 aa8.28□□□□□ -1.08
CTNND1-236ENST00000533667 THEMISQ8N1K5 641 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-236ENST00000533667 HMGXB3Q12766 1538 aa8.28□□□□□ -1.08
CTNND1-236ENST00000533667 ZNF526Q8TF50 670 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-236ENST00000533667 CNNM1Q9NRU3 951 aa8.28□□□□□ -1.08
CTNND1-236ENST00000533667 CABP1Q9NZU7 370 aa8.28□□□□□ -1.08
CTNND1-236ENST00000533667 BCCIPQ9P287 314 aaKnown RBP eCLIP8.28□□□□□ -1.081e-6■■■■□ 21.2
CTNND1-236ENST00000533667 PLEKHH1Q9ULM0 1364 aa8.28□□□□□ -1.08
CTNND1-236ENST00000533667 PDRG1Q9NUG6 133 aa8.28□□□□□ -1.08
CTNND1-236ENST00000533667 MAP3K1Q13233 1512 aa8.28□□□□□ -1.08
CTNND1-236ENST00000533667 WDR97A6NE52 1622 aa8.28□□□□□ -1.08
CTNND1-236ENST00000533667 H0YHG0 523 aa8.28□□□□□ -1.08
CTNND1-236ENST00000533667 FYB1O15117 783 aa8.28□□□□□ -1.08
CTNND1-236ENST00000533667 ME1P48163 572 aa8.28□□□□□ -1.08
CTNND1-236ENST00000533667 WASF1Q92558 559 aa8.28□□□□□ -1.08
CTNND1-236ENST00000533667 NAIPQ13075 1403 aa8.27□□□□□ -1.09
CTNND1-236ENST00000533667 SMTNL1A8MU46 457 aa8.27□□□□□ -1.09
CTNND1-236ENST00000533667 KIF2AO00139 706 aaPredicted RBP8.27□□□□□ -1.09
CTNND1-236ENST00000533667 IQCEQ6IPM2 695 aa8.27□□□□□ -1.09
CTNND1-236ENST00000533667 BRPF3Q9ULD4 1205 aa8.27□□□□□ -1.09
CTNND1-236ENST00000533667 RAB11FIP3O75154 756 aa8.27□□□□□ -1.09
CTNND1-236ENST00000533667 EIF3JO75822 258 aaKnown RBP8.27□□□□□ -1.09
CTNND1-236ENST00000533667 SPATA32Q96LK8 384 aa8.27□□□□□ -1.09
CTNND1-236ENST00000533667 FMNL2Q96PY5 1086 aa8.27□□□□□ -1.09
CTNND1-236ENST00000533667 NUP62CLQ9H1M0 184 aa8.27□□□□□ -1.09
CTNND1-236ENST00000533667 CCDC69A6NI79 296 aa8.27□□□□□ -1.09
CTNND1-236ENST00000533667 HMGB2P26583 209 aaKnown RBP8.27□□□□□ -1.09
CTNND1-236ENST00000533667 NUTM2GQ5VZR2 741 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms