RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 VAMP4O75379 141 aa19.54■□□□□ 0.72
CACNA1E-208ENST00000533229 MON2Q7Z3U7 1717 aa19.54■□□□□ 0.72
CACNA1E-208ENST00000533229 TTC21BQ7Z4L5 1316 aa19.53■□□□□ 0.72
CACNA1E-208ENST00000533229 PTPRUQ92729 1446 aa19.53■□□□□ 0.72
CACNA1E-208ENST00000533229 ZNF853P0CG23 659 aa19.53■□□□□ 0.72
CACNA1E-208ENST00000533229 RTL5Q5HYW3 569 aaPredicted RBP19.53■□□□□ 0.72
CACNA1E-208ENST00000533229 ZBTB40Q9NUA8 1239 aa19.53■□□□□ 0.72
CACNA1E-208ENST00000533229 C3P01024 1663 aa19.52■□□□□ 0.72
CACNA1E-208ENST00000533229 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.52■□□□□ 0.72
CACNA1E-208ENST00000533229 FAM83GA6ND36 823 aa19.52■□□□□ 0.72
CACNA1E-208ENST00000533229 IPO8O15397 1037 aaKnown RBP19.52■□□□□ 0.72
CACNA1E-208ENST00000533229 HDAC1Q13547 482 aaPredicted RBP19.52■□□□□ 0.72
CACNA1E-208ENST00000533229 MBIPQ9NS73 344 aa19.52■□□□□ 0.72
CACNA1E-208ENST00000533229 IFT57Q9NWB7 429 aa19.51■□□□□ 0.71
CACNA1E-208ENST00000533229 PLEKHG3A1L390 1219 aa19.51■□□□□ 0.71
CACNA1E-208ENST00000533229 ELL2O00472 640 aaPredicted RBP19.51■□□□□ 0.71
CACNA1E-208ENST00000533229 BRPF1P55201 1214 aaPredicted RBP19.51■□□□□ 0.71
CACNA1E-208ENST00000533229 PLPPR3Q6T4P5 718 aa19.51■□□□□ 0.71
CACNA1E-208ENST00000533229 GNAI1P63096 354 aa19.49■□□□□ 0.71
CACNA1E-208ENST00000533229 DCTN1Q14203 1278 aa19.49■□□□□ 0.71
CACNA1E-208ENST00000533229 EIF4A2Q14240 407 aaKnown RBP19.49■□□□□ 0.71
CACNA1E-208ENST00000533229 AEBP1Q8IUX7 1158 aa19.49■□□□□ 0.71
CACNA1E-208ENST00000533229 AKAP12Q02952 1782 aa19.49■□□□□ 0.71
CACNA1E-208ENST00000533229 CALD1Q05682 793 aaKnown RBP19.49■□□□□ 0.71
CACNA1E-208ENST00000533229 MRPL50Q8N5N7 158 aaKnown RBP19.49■□□□□ 0.71
CACNA1E-208ENST00000533229 ZNF428Q96B54 188 aa19.49■□□□□ 0.71
CACNA1E-208ENST00000533229 DAXXQ9UER7 740 aaPredicted RBP19.48■□□□□ 0.71
CACNA1E-208ENST00000533229 AMOTL2Q9Y2J4 779 aa19.48■□□□□ 0.71
CACNA1E-208ENST00000533229 CFAP44Q96MT7 982 aa19.48■□□□□ 0.71
CACNA1E-208ENST00000533229 C8orf58Q8NAV2 365 aa19.47■□□□□ 0.71
CACNA1E-208ENST00000533229 EID1Q9Y6B2 187 aa19.47■□□□□ 0.71
CACNA1E-208ENST00000533229 OVOS2A0A0J9YW53 1432 aa19.47■□□□□ 0.71
CACNA1E-208ENST00000533229 USP6P35125 1406 aa19.47■□□□□ 0.71
CACNA1E-208ENST00000533229 OVOS2Q6IE36 1432 aa19.47■□□□□ 0.71
CACNA1E-208ENST00000533229 SMC5Q8IY18 1101 aa19.46■□□□□ 0.71
CACNA1E-208ENST00000533229 HSP90AB2PQ58FF8 381 aa19.46■□□□□ 0.71
CACNA1E-208ENST00000533229 SULT6B1Q6IMI4 303 aa19.46■□□□□ 0.71
CACNA1E-208ENST00000533229 ITSN1Q15811 1721 aa19.45■□□□□ 0.7
CACNA1E-208ENST00000533229 TWISTNBQ3B726 338 aaPredicted RBP19.45■□□□□ 0.7
CACNA1E-208ENST00000533229 USP35Q9P2H5 1018 aa19.45■□□□□ 0.7
CACNA1E-208ENST00000533229 ZBTB7BO15156 539 aaPredicted RBP19.44■□□□□ 0.7
CACNA1E-208ENST00000533229 LMOD3Q0VAK6 560 aa19.44■□□□□ 0.7
CACNA1E-208ENST00000533229 NRKQ7Z2Y5 1582 aa19.44■□□□□ 0.7
CACNA1E-208ENST00000533229 VIRMAQ69YN4 1812 aaKnown RBP19.44■□□□□ 0.7
CACNA1E-208ENST00000533229 SOX12O15370 315 aa19.43■□□□□ 0.7
CACNA1E-208ENST00000533229 SSH2Q76I76 1423 aa19.43■□□□□ 0.7
CACNA1E-208ENST00000533229 ARHGAP45Q92619 1136 aa19.43■□□□□ 0.7
CACNA1E-208ENST00000533229 TBX22Q9Y458 520 aa19.43■□□□□ 0.7
CACNA1E-208ENST00000533229 TOPAZ1Q8N9V7 1692 aa19.42■□□□□ 0.7
CACNA1E-208ENST00000533229 ARHGAP23Q9P227 1491 aa19.42■□□□□ 0.7
CACNA1E-208ENST00000533229 USP31Q70CQ4 1352 aa19.41■□□□□ 0.7
CACNA1E-208ENST00000533229 NFKBIBQ15653 356 aa19.41■□□□□ 0.7
CACNA1E-208ENST00000533229 SLIT1O75093 1534 aa19.41■□□□□ 0.7
CACNA1E-208ENST00000533229 PTCH1Q13635 1447 aa19.41■□□□□ 0.7
CACNA1E-208ENST00000533229 PIK3R4Q99570 1358 aa19.4■□□□□ 0.7
CACNA1E-208ENST00000533229 TBC1D32Q96NH3 1257 aa19.4■□□□□ 0.7
CACNA1E-208ENST00000533229 C1orf115Q9H7X2 142 aa19.39■□□□□ 0.69
CACNA1E-208ENST00000533229 NUCB1Q02818 461 aa19.39■□□□□ 0.69
CACNA1E-208ENST00000533229 KRT24Q2M2I5 525 aa19.39■□□□□ 0.69
CACNA1E-208ENST00000533229 MCM10Q7L590 875 aa19.39■□□□□ 0.69
CACNA1E-208ENST00000533229 ABCC4O15439 1325 aa19.38■□□□□ 0.69
CACNA1E-208ENST00000533229 MAP3K19Q56UN5 1328 aa19.38■□□□□ 0.69
CACNA1E-208ENST00000533229 PEAK1Q9H792 1746 aa19.38■□□□□ 0.69
CACNA1E-208ENST00000533229 THEMISQ8N1K5 641 aaPredicted RBP19.37■□□□□ 0.69
CACNA1E-208ENST00000533229 DLG5Q8TDM6 1919 aa19.37■□□□□ 0.69
CACNA1E-208ENST00000533229 LNPKQ9C0E8 428 aa19.36■□□□□ 0.69
CACNA1E-208ENST00000533229 UPF2Q9HAU5 1272 aaKnown RBP19.36■□□□□ 0.69
CACNA1E-208ENST00000533229 SIRT2Q8IXJ6 389 aa19.36■□□□□ 0.69
CACNA1E-208ENST00000533229 NGDNQ8NEJ9 315 aaKnown RBP19.36■□□□□ 0.69
CACNA1E-208ENST00000533229 CHL1O00533 1208 aa19.35■□□□□ 0.69
CACNA1E-208ENST00000533229 TTC21AQ8NDW8 1320 aa19.35■□□□□ 0.69
CACNA1E-208ENST00000533229 CHD1LQ86WJ1 897 aa19.34■□□□□ 0.69
CACNA1E-208ENST00000533229 FOXO3O43524 673 aa19.33■□□□□ 0.69
CACNA1E-208ENST00000533229 NALCNQ8IZF0 1738 aa19.33■□□□□ 0.69
CACNA1E-208ENST00000533229 KCNA6P17658 529 aa19.33■□□□□ 0.68
CACNA1E-208ENST00000533229 DIP2AQ14689 1571 aa19.32■□□□□ 0.68
CACNA1E-208ENST00000533229 MFAP1P55081 439 aaKnown RBP19.31■□□□□ 0.68
CACNA1E-208ENST00000533229 API5Q9BZZ5 524 aaKnown RBP19.31■□□□□ 0.68
CACNA1E-208ENST00000533229 BECN1Q14457 450 aa19.31■□□□□ 0.68
CACNA1E-208ENST00000533229 RGPD1P0DJD0 1748 aa19.3■□□□□ 0.68
CACNA1E-208ENST00000533229 FRAT2O75474 233 aaPredicted RBP19.3■□□□□ 0.68
CACNA1E-208ENST00000533229 MTHFSDQ2M296 383 aaKnown RBP19.3■□□□□ 0.68
CACNA1E-208ENST00000533229 ANKRD45Q5TZF3 282 aa19.3■□□□□ 0.68
CACNA1E-208ENST00000533229 TBC1D2Q9BYX2 928 aa19.3■□□□□ 0.68
CACNA1E-208ENST00000533229 CHMP4BQ9H444 224 aaKnown RBP19.3■□□□□ 0.68
CACNA1E-208ENST00000533229 MIS18AQ9NYP9 233 aa19.3■□□□□ 0.68
CACNA1E-208ENST00000533229 SBNO1A3KN83 1393 aa19.29■□□□□ 0.68
CACNA1E-208ENST00000533229 CRB1P82279 1406 aa19.29■□□□□ 0.68
CACNA1E-208ENST00000533229 GCC1Q96CN9 775 aa19.29■□□□□ 0.68
CACNA1E-208ENST00000533229 EYA1Q99502 592 aa19.29■□□□□ 0.68
CACNA1E-208ENST00000533229 C22orf23Q9BZE7 217 aa19.29■□□□□ 0.68
CACNA1E-208ENST00000533229 ARHGEF10O15013 1369 aa19.29■□□□□ 0.68
CACNA1E-208ENST00000533229 FLT4P35916 1363 aa19.29■□□□□ 0.68
CACNA1E-208ENST00000533229 NUTM2GQ5VZR2 741 aa19.28■□□□□ 0.68
CACNA1E-208ENST00000533229 TRHP20396 242 aaPredicted RBP19.27■□□□□ 0.68
CACNA1E-208ENST00000533229 AMPHP49418 695 aa19.27■□□□□ 0.68
CACNA1E-208ENST00000533229 NLRP6P59044 892 aa19.27■□□□□ 0.68
CACNA1E-208ENST00000533229 SLKQ9H2G2 1235 aaPredicted RBP19.27■□□□□ 0.68
CACNA1E-208ENST00000533229 RGS12O14924 1447 aa19.27■□□□□ 0.67
CACNA1E-208ENST00000533229 KIAA0232Q92628 1395 aa19.27■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms