RNA–Protein interactions for RNA: ENST00000532313.5

CSRP1-215, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 5,239 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-215ENST00000532313 DIAPH3Q9NSV4 1193 aa14.29□□□□□ -0.12
CSRP1-215ENST00000532313 CCT4P50991 539 aaKnown RBP14.29□□□□□ -0.12
CSRP1-215ENST00000532313 ST5P78524 1137 aa14.29□□□□□ -0.12
CSRP1-215ENST00000532313 RPGRQ92834 1020 aaKnown RBP14.29□□□□□ -0.12
CSRP1-215ENST00000532313 TAOK2Q9UL54 1235 aa14.29□□□□□ -0.12
CSRP1-215ENST00000532313 TULP1O00294 542 aaPredicted RBP14.29□□□□□ -0.12
CSRP1-215ENST00000532313 SLC3A2P08195 630 aaKnown RBP14.29□□□□□ -0.12
CSRP1-215ENST00000532313 CCDC57Q2TAC2 916 aa14.29□□□□□ -0.12
CSRP1-215ENST00000532313 TRDNQ13061 729 aa14.29□□□□□ -0.12
CSRP1-215ENST00000532313 WDR63Q8IWG1 891 aa14.29□□□□□ -0.12
CSRP1-215ENST00000532313 HSCBQ8IWL3 235 aa14.28□□□□□ -0.12
CSRP1-215ENST00000532313 PIK3C2GO75747 1445 aa14.28□□□□□ -0.12
CSRP1-215ENST00000532313 ABCC1P33527 1531 aa14.28□□□□□ -0.12
CSRP1-215ENST00000532313 PTCD1O75127 700 aaKnown RBP14.28□□□□□ -0.12
CSRP1-215ENST00000532313 TCEAL9Q9UHQ7 104 aa14.28□□□□□ -0.12
CSRP1-215ENST00000532313 ABCC11Q96J66 1382 aa14.28□□□□□ -0.12
CSRP1-215ENST00000532313 MARCH6O60337 910 aa14.28□□□□□ -0.12
CSRP1-215ENST00000532313 TMEM94Q12767 1356 aa14.28□□□□□ -0.12
CSRP1-215ENST00000532313 BTG4Q9NY30 223 aa14.27□□□□□ -0.12
CSRP1-215ENST00000532313 NEUROD6Q96NK8 337 aa14.27□□□□□ -0.13
CSRP1-215ENST00000532313 GCP02774 474 aa14.27□□□□□ -0.13
CSRP1-215ENST00000532313 SRCIN1Q9C0H9 1055 aa14.27□□□□□ -0.13
CSRP1-215ENST00000532313 NPATQ14207 1427 aa14.26□□□□□ -0.13
CSRP1-215ENST00000532313 B4GALNT3Q6L9W6 998 aa14.26□□□□□ -0.13
CSRP1-215ENST00000532313 BICDL1Q6ZP65 573 aa14.26□□□□□ -0.13
CSRP1-215ENST00000532313 APPP05067 770 aa14.26□□□□□ -0.13
CSRP1-215ENST00000532313 RXRBP28702 533 aa14.26□□□□□ -0.13
CSRP1-215ENST00000532313 CCDC158Q5M9N0 1113 aa14.26□□□□□ -0.13
CSRP1-215ENST00000532313 LARP1Q6PKG0 1096 aaKnown RBP14.26□□□□□ -0.13
CSRP1-215ENST00000532313 PPP1R42Q7Z4L9 355 aa14.26□□□□□ -0.13
CSRP1-215ENST00000532313 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.26□□□□□ -0.13
CSRP1-215ENST00000532313 ERICH2A1L162 156 aa14.26□□□□□ -0.13
CSRP1-215ENST00000532313 ZBED9Q6R2W3 1325 aa14.26□□□□□ -0.13
CSRP1-215ENST00000532313 CCDC27Q2M243 656 aa14.25□□□□□ -0.13
CSRP1-215ENST00000532313 SAMD9LQ8IVG5 1584 aa14.25□□□□□ -0.13
CSRP1-215ENST00000532313 CLASRPQ8N2M8 674 aaKnown RBP14.25□□□□□ -0.13
CSRP1-215ENST00000532313 PCDH11XQ9BZA7 1347 aa14.25□□□□□ -0.13
CSRP1-215ENST00000532313 PCDH11YQ9BZA8 1340 aa14.25□□□□□ -0.13
CSRP1-215ENST00000532313 CLSTN1O94985 981 aa14.24□□□□□ -0.13
CSRP1-215ENST00000532313 FLT4P35916 1363 aa14.24□□□□□ -0.13
CSRP1-215ENST00000532313 MYL6BP14649 208 aa14.24□□□□□ -0.13
CSRP1-215ENST00000532313 RNF20Q5VTR2 975 aa14.24□□□□□ -0.13
CSRP1-215ENST00000532313 CERKQ8TCT0 537 aa14.24□□□□□ -0.13
CSRP1-215ENST00000532313 PLIN1O60240 522 aa14.24□□□□□ -0.13
CSRP1-215ENST00000532313 TFCP2L1Q9NZI6 479 aa14.24□□□□□ -0.13
CSRP1-215ENST00000532313 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.23□□□□□ -0.13
CSRP1-215ENST00000532313 HYPKQ9NX55 129 aa14.23□□□□□ -0.13
CSRP1-215ENST00000532313 ADAMTS8Q9UP79 889 aa14.23□□□□□ -0.13
CSRP1-215ENST00000532313 VPS53Q5VIR6 699 aa14.23□□□□□ -0.13
CSRP1-215ENST00000532313 C16orf71Q8IYS4 520 aaPredicted RBP14.23□□□□□ -0.13
CSRP1-215ENST00000532313 FLAD1Q8NFF5 587 aa14.23□□□□□ -0.13
CSRP1-215ENST00000532313 BCL2L13Q9BXK5 485 aa14.23□□□□□ -0.13
CSRP1-215ENST00000532313 RAD21O60216 631 aa14.22□□□□□ -0.13
CSRP1-215ENST00000532313 ZSCAN25Q6NSZ9 544 aa14.22□□□□□ -0.13
CSRP1-215ENST00000532313 PARP3Q9Y6F1 533 aa14.22□□□□□ -0.13
CSRP1-215ENST00000532313 SLC4A2P04920 1241 aa14.22□□□□□ -0.13
CSRP1-215ENST00000532313 ZKSCAN1P17029 563 aaPredicted RBP14.22□□□□□ -0.13
CSRP1-215ENST00000532313 RTCBQ9Y3I0 505 aaKnown RBP14.22□□□□□ -0.13
CSRP1-215ENST00000532313 SNRPA1P09661 255 aaKnown RBP14.21□□□□□ -0.13
CSRP1-215ENST00000532313 SLF2Q8IX21 1173 aa14.21□□□□□ -0.13
CSRP1-215ENST00000532313 EMILIN1Q9Y6C2 1016 aa14.21□□□□□ -0.14
CSRP1-215ENST00000532313 PREX2Q70Z35 1606 aa14.21□□□□□ -0.14
CSRP1-215ENST00000532313 A2ML1A8K2U0 1454 aa14.21□□□□□ -0.14
CSRP1-215ENST00000532313 GNAI2P04899 355 aa14.2□□□□□ -0.14
CSRP1-215ENST00000532313 NYXQ9GZU5 481 aa14.2□□□□□ -0.14
CSRP1-215ENST00000532313 HIP1O00291 1037 aa14.2□□□□□ -0.14
CSRP1-215ENST00000532313 LTKP29376 864 aa14.2□□□□□ -0.14
CSRP1-215ENST00000532313 ATP6V1AP38606 617 aa14.2□□□□□ -0.14
CSRP1-215ENST00000532313 ANKRD45Q5TZF3 282 aa14.2□□□□□ -0.14
CSRP1-215ENST00000532313 USHBP1Q8N6Y0 703 aa14.2□□□□□ -0.14
CSRP1-215ENST00000532313 ARHGEF12Q9NZN5 1544 aa14.2□□□□□ -0.14
CSRP1-215ENST00000532313 RBM5P52756 815 aaKnown RBP eCLIP14.2□□□□□ -0.14
CSRP1-215ENST00000532313 IP6K1Q92551 441 aa14.2□□□□□ -0.14
CSRP1-215ENST00000532313 RILPL2Q969X0 211 aa14.2□□□□□ -0.14
CSRP1-215ENST00000532313 CEP126Q9P2H0 1117 aa14.2□□□□□ -0.14
CSRP1-215ENST00000532313 ERCC6L2Q5T890 1561 aa14.2□□□□□ -0.14
CSRP1-215ENST00000532313 PZPP20742 1482 aa14.2□□□□□ -0.14
CSRP1-215ENST00000532313 GOLGA6L6A8MZA4 724 aa14.2□□□□□ -0.14
CSRP1-215ENST00000532313 DHX16O60231 1041 aaKnown RBP14.2□□□□□ -0.14
CSRP1-215ENST00000532313 IFT57Q9NWB7 429 aa14.2□□□□□ -0.14
CSRP1-215ENST00000532313 WASHC4Q2M389 1173 aa14.19□□□□□ -0.14
CSRP1-215ENST00000532313 CDC5LQ99459 802 aaKnown RBP14.19□□□□□ -0.14
CSRP1-215ENST00000532313 DBF4Q9UBU7 674 aaPredicted RBP14.19□□□□□ -0.14
CSRP1-215ENST00000532313 AKAP4Q5JQC9 854 aa14.19□□□□□ -0.14
CSRP1-215ENST00000532313 PRAG1Q86YV5 1406 aa14.19□□□□□ -0.14
CSRP1-215ENST00000532313 DDX46Q7L014 1031 aaKnown RBP14.19□□□□□ -0.14
CSRP1-215ENST00000532313 ERVK-7P63135 1459 aa14.19□□□□□ -0.14
CSRP1-215ENST00000532313 TTC39AQ5SRH9 613 aa14.19□□□□□ -0.14
CSRP1-215ENST00000532313 CABLES1Q8TDN4 633 aa14.19□□□□□ -0.14
CSRP1-215ENST00000532313 TCERG1O14776 1098 aaKnown RBP14.18□□□□□ -0.14
CSRP1-215ENST00000532313 DCAF5Q96JK2 942 aa14.18□□□□□ -0.14
CSRP1-215ENST00000532313 QTRT2Q9H974 415 aaKnown RBP14.18□□□□□ -0.14
CSRP1-215ENST00000532313 CAVIN4Q5BKX8 364 aa14.18□□□□□ -0.14
CSRP1-215ENST00000532313 KDM5CP41229 1560 aa14.18□□□□□ -0.14
CSRP1-215ENST00000532313 NRDCO43847 1150 aa14.18□□□□□ -0.14
CSRP1-215ENST00000532313 TTC37Q6PGP7 1564 aa14.18□□□□□ -0.14
CSRP1-215ENST00000532313 RALGAPBQ86X10 1494 aa14.18□□□□□ -0.14
CSRP1-215ENST00000532313 ORAI2Q96SN7 254 aa14.18□□□□□ -0.14
CSRP1-215ENST00000532313 SETDB2Q96T68 719 aa14.18□□□□□ -0.14
CSRP1-215ENST00000532313 AKAP2Q9Y2D5 859 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms