RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 ERC2O15083 957 aa9.75□□□□□ -0.85
CTNND1-230ENST00000532245 AKAP17AQ02040 695 aaKnown RBP9.75□□□□□ -0.85
CTNND1-230ENST00000532245 SHANK2Q9UPX8 1470 aa9.75□□□□□ -0.85
CTNND1-230ENST00000532245 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.75□□□□□ -0.85
CTNND1-230ENST00000532245 LTKP29376 864 aa9.75□□□□□ -0.85
CTNND1-230ENST00000532245 MTMR7Q9Y216 660 aa9.75□□□□□ -0.85
CTNND1-230ENST00000532245 ERCC6L2Q5T890 1561 aa9.75□□□□□ -0.85
CTNND1-230ENST00000532245 PTMAP06454 111 aaKnown RBP9.75□□□□□ -0.85
CTNND1-230ENST00000532245 DUSP27Q5VZP5 1158 aa9.74□□□□□ -0.85
CTNND1-230ENST00000532245 CLASRPQ8N2M8 674 aaKnown RBP9.74□□□□□ -0.85
CTNND1-230ENST00000532245 GNAI2P04899 355 aa9.74□□□□□ -0.85
CTNND1-230ENST00000532245 TRDNQ13061 729 aa9.74□□□□□ -0.85
CTNND1-230ENST00000532245 FAM161AQ3B820 660 aa9.74□□□□□ -0.85
CTNND1-230ENST00000532245 ANP32EQ9BTT0 268 aa9.74□□□□□ -0.85
CTNND1-230ENST00000532245 GNL3LQ9NVN8 582 aaKnown RBP9.74□□□□□ -0.85
CTNND1-230ENST00000532245 TBC1D2BQ9UPU7 963 aa9.74□□□□□ -0.85
CTNND1-230ENST00000532245 GCP02774 474 aa9.73□□□□□ -0.85
CTNND1-230ENST00000532245 TTC39AQ5SRH9 613 aa9.73□□□□□ -0.85
CTNND1-230ENST00000532245 WDR63Q8IWG1 891 aa9.73□□□□□ -0.85
CTNND1-230ENST00000532245 BCAR3O75815 825 aa9.73□□□□□ -0.85
CTNND1-230ENST00000532245 FMNL2Q96PY5 1086 aa9.73□□□□□ -0.85
CTNND1-230ENST00000532245 SLKQ9H2G2 1235 aaPredicted RBP9.73□□□□□ -0.85
CTNND1-230ENST00000532245 CCDC184Q52MB2 194 aa9.73□□□□□ -0.85
CTNND1-230ENST00000532245 SAMD9Q5K651 1589 aa9.73□□□□□ -0.85
CTNND1-230ENST00000532245 ANO2Q9NQ90 1003 aa9.73□□□□□ -0.85
CTNND1-230ENST00000532245 RFC4P35249 363 aa9.73□□□□□ -0.85
CTNND1-230ENST00000532245 TMEM2Q9UHN6 1383 aa9.72□□□□□ -0.85
CTNND1-230ENST00000532245 NINLQ9Y2I6 1382 aa9.72□□□□□ -0.85
CTNND1-230ENST00000532245 GPTP24298 496 aa9.72□□□□□ -0.85
CTNND1-230ENST00000532245 SPINK5Q9NQ38 1064 aaPredicted RBP9.72□□□□□ -0.85
CTNND1-230ENST00000532245 CFAP43Q8NDM7 1665 aa9.72□□□□□ -0.85
CTNND1-230ENST00000532245 CCT4P50991 539 aaKnown RBP9.72□□□□□ -0.85
CTNND1-230ENST00000532245 CCDC158Q5M9N0 1113 aa9.72□□□□□ -0.85
CTNND1-230ENST00000532245 NFXL1Q6ZNB6 911 aa9.72□□□□□ -0.85
CTNND1-230ENST00000532245 FSD1Q9BTV5 496 aa9.72□□□□□ -0.85
CTNND1-230ENST00000532245 YTHDC2Q9H6S0 1430 aaKnown RBP9.72□□□□□ -0.85
CTNND1-230ENST00000532245 ZKSCAN1P17029 563 aaPredicted RBP9.72□□□□□ -0.85
CTNND1-230ENST00000532245 IGHMBP2P38935 993 aaKnown RBP9.72□□□□□ -0.85
CTNND1-230ENST00000532245 MYD88Q99836 296 aa9.72□□□□□ -0.85
CTNND1-230ENST00000532245 IL2RBP14784 551 aa9.72□□□□□ -0.85
CTNND1-230ENST00000532245 ZBTB3Q9H5J0 574 aa9.72□□□□□ -0.85
CTNND1-230ENST00000532245 ST18O60284 1047 aa9.71□□□□□ -0.85
CTNND1-230ENST00000532245 FOXD4L5Q5VV16 416 aaPredicted RBP9.71□□□□□ -0.85
CTNND1-230ENST00000532245 FOXD4L4Q8WXT5 416 aaPredicted RBP9.71□□□□□ -0.85
CTNND1-230ENST00000532245 ERICH2A1L162 156 aa9.71□□□□□ -0.85
CTNND1-230ENST00000532245 ATP6V1AP38606 617 aa9.71□□□□□ -0.85
CTNND1-230ENST00000532245 WWC1Q8IX03 1113 aa9.71□□□□□ -0.85
CTNND1-230ENST00000532245 ABCA8O94911 1581 aa9.71□□□□□ -0.85
CTNND1-230ENST00000532245 TRMT112Q9UI30 125 aaKnown RBP9.71□□□□□ -0.85
CTNND1-230ENST00000532245 TCEAL9Q9UHQ7 104 aa9.71□□□□□ -0.86
CTNND1-230ENST00000532245 WWC3Q9ULE0 1092 aa9.71□□□□□ -0.86
CTNND1-230ENST00000532245 CFAP74Q9C0B2 1584 aa9.71□□□□□ -0.86
CTNND1-230ENST00000532245 FAM83GA6ND36 823 aa9.71□□□□□ -0.86
CTNND1-230ENST00000532245 IKQ13123 557 aaPredicted RBP9.71□□□□□ -0.86
CTNND1-230ENST00000532245 SLC4A3P48751 1232 aa9.7□□□□□ -0.86
CTNND1-230ENST00000532245 FAM184AQ8NB25 1140 aa9.7□□□□□ -0.86
CTNND1-230ENST00000532245 RPGRQ92834 1020 aaKnown RBP9.7□□□□□ -0.86
CTNND1-230ENST00000532245 PRAG1Q86YV5 1406 aa9.7□□□□□ -0.86
CTNND1-230ENST00000532245 ANKIB1Q9P2G1 1089 aa9.7□□□□□ -0.86
CTNND1-230ENST00000532245 ZCCHC11Q5TAX3 1644 aaKnown RBP9.7□□□□□ -0.86
CTNND1-230ENST00000532245 H3BQV1 296 aa9.69□□□□□ -0.86
CTNND1-230ENST00000532245 IFFO2Q5TF58 517 aa9.69□□□□□ -0.86
CTNND1-230ENST00000532245 USP21Q9UK80 565 aa9.69□□□□□ -0.86
CTNND1-230ENST00000532245 NPATQ14207 1427 aa9.69□□□□□ -0.86
CTNND1-230ENST00000532245 HTATSF1O43719 755 aaKnown RBP9.69□□□□□ -0.86
CTNND1-230ENST00000532245 FAM98CQ17RN3 349 aaKnown RBP9.69□□□□□ -0.86
CTNND1-230ENST00000532245 STK11IPQ8N1F8 1099 aa9.69□□□□□ -0.86
CTNND1-230ENST00000532245 TRIM44Q96DX7 344 aaPredicted RBP9.69□□□□□ -0.86
CTNND1-230ENST00000532245 KIF3AQ9Y496 699 aa9.69□□□□□ -0.86
CTNND1-230ENST00000532245 SRGAP3O43295 1099 aa9.69□□□□□ -0.86
CTNND1-230ENST00000532245 SLC39A6Q13433 755 aa9.69□□□□□ -0.86
CTNND1-230ENST00000532245 MAPKBP1O60336 1514 aa9.69□□□□□ -0.86
CTNND1-230ENST00000532245 DNMT1P26358 1616 aaKnown RBP9.69□□□□□ -0.86
CTNND1-230ENST00000532245 CPLX1O14810 134 aa9.69□□□□□ -0.86
CTNND1-230ENST00000532245 ERC1Q8IUD2 1116 aa9.69□□□□□ -0.86
CTNND1-230ENST00000532245 ZNF622Q969S3 477 aaKnown RBP eCLIP9.69□□□□□ -0.863e-7■□□□□ 10.1
CTNND1-230ENST00000532245 NSD2O96028 1365 aa9.69□□□□□ -0.86
CTNND1-230ENST00000532245 CFAP65Q6ZU64 1925 aaKnown RBP9.69□□□□□ -0.86
CTNND1-230ENST00000532245 RNF20Q5VTR2 975 aa9.69□□□□□ -0.86
CTNND1-230ENST00000532245 CPLX2Q6PUV4 134 aaKnown RBP9.69□□□□□ -0.86
CTNND1-230ENST00000532245 CCAR1Q8IX12 1150 aaKnown RBP9.69□□□□□ -0.86
CTNND1-230ENST00000532245 TFCP2L1Q9NZI6 479 aa9.69□□□□□ -0.86
CTNND1-230ENST00000532245 ANKRD36BQ8N2N9 1353 aa9.69□□□□□ -0.86
CTNND1-230ENST00000532245 ABCC1P33527 1531 aa9.68□□□□□ -0.86
CTNND1-230ENST00000532245 REC8O95072 547 aa9.68□□□□□ -0.86
CTNND1-230ENST00000532245 LARP1Q6PKG0 1096 aaKnown RBP9.68□□□□□ -0.86
CTNND1-230ENST00000532245 RALYLQ86SE5 291 aaKnown RBP9.68□□□□□ -0.86
CTNND1-230ENST00000532245 IFT57Q9NWB7 429 aa9.68□□□□□ -0.86
CTNND1-230ENST00000532245 CEP126Q9P2H0 1117 aa9.68□□□□□ -0.86
CTNND1-230ENST00000532245 MAST1Q9Y2H9 1570 aa9.68□□□□□ -0.86
CTNND1-230ENST00000532245 TRPM2O94759 1503 aa9.68□□□□□ -0.86
CTNND1-230ENST00000532245 CHAF1AQ13111 956 aaPredicted RBP9.68□□□□□ -0.86
CTNND1-230ENST00000532245 NOP58Q9Y2X3 529 aaKnown RBP9.68□□□□□ -0.86
CTNND1-230ENST00000532245 ATP2B2Q01814 1243 aa9.68□□□□□ -0.86
CTNND1-230ENST00000532245 FKBP4Q02790 459 aaKnown RBP eCLIP9.68□□□□□ -0.86
CTNND1-230ENST00000532245 AEBP1Q8IUX7 1158 aa9.68□□□□□ -0.86
CTNND1-230ENST00000532245 ZSCAN29Q8IWY8 852 aaPredicted RBP9.68□□□□□ -0.86
CTNND1-230ENST00000532245 TEX13AQ9BXU3 409 aaPredicted RBP9.68□□□□□ -0.86
CTNND1-230ENST00000532245 NBPF14Q5TI25 921 aa9.68□□□□□ -0.86
CTNND1-230ENST00000532245 ATF7IPQ6VMQ6 1270 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms