RNA–Protein interactions for RNA: ENST00000531914.5

MS4A6A-215, Transcript of membrane spanning 4-domains A6A, human

TSL 2

Gene MS4A6A, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MS4A6A-215	ENST00000531914	RNF166	Q96A37	237 aa	Predicted RBP	13.74	□□□□□ -0.21
MS4A6A-215	ENST00000531914	PRAM1	Q96QH2	718 aa		13.74	□□□□□ -0.21
MS4A6A-215	ENST00000531914	RGS17	Q9UGC6	210 aa	Predicted RBP	13.74	□□□□□ -0.21
MS4A6A-215	ENST00000531914	FMN2	Q9NZ56	1722 aa		13.73	□□□□□ -0.21
MS4A6A-215	ENST00000531914	NUDT7	P0C024	238 aa		13.73	□□□□□ -0.21
MS4A6A-215	ENST00000531914	L3MBTL2	Q969R5	705 aa		13.73	□□□□□ -0.21
MS4A6A-215	ENST00000531914	TRAK1	Q9UPV9	953 aa		13.73	□□□□□ -0.21
MS4A6A-215	ENST00000531914	RGPD8	O14715	1765 aa	Predicted RBP	13.73	□□□□□ -0.21
MS4A6A-215	ENST00000531914	SHPRH	Q149N8	1683 aa		13.72	□□□□□ -0.21
MS4A6A-215	ENST00000531914	NUTM2F	A1L443	756 aa		13.72	□□□□□ -0.21
MS4A6A-215	ENST00000531914	PPP1R37	O75864	691 aa		13.72	□□□□□ -0.21
MS4A6A-215	ENST00000531914	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
MS4A6A-215	ENST00000531914	HS6ST3	Q8IZP7	471 aa		13.72	□□□□□ -0.21
MS4A6A-215	ENST00000531914	KIAA1210	Q9ULL0	1709 aa		13.72	□□□□□ -0.21
MS4A6A-215	ENST00000531914	NBPF1	Q3BBV0	1214 aa		13.71	□□□□□ -0.21
MS4A6A-215	ENST00000531914	ANKRD13D	Q6ZTN6	518 aa		13.71	□□□□□ -0.21
MS4A6A-215	ENST00000531914	PCDHGA4	Q9Y5G9	962 aa		13.71	□□□□□ -0.21
MS4A6A-215	ENST00000531914	LRP6	O75581	1613 aa		13.71	□□□□□ -0.22
MS4A6A-215	ENST00000531914	SOS2	Q07890	1332 aa	Predicted RBP	13.7	□□□□□ -0.22
MS4A6A-215	ENST00000531914	SLC34A2	O95436	690 aa		13.7	□□□□□ -0.22
MS4A6A-215	ENST00000531914	NEUROD1	Q13562	356 aa		13.7	□□□□□ -0.22
MS4A6A-215	ENST00000531914	ESCO1	Q5FWF5	840 aa		13.7	□□□□□ -0.22
MS4A6A-215	ENST00000531914	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.7	□□□□□ -0.22
MS4A6A-215	ENST00000531914	PTGER2	P43116	358 aa		13.69	□□□□□ -0.22
MS4A6A-215	ENST00000531914	LRRC59	Q96AG4	307 aa	Known RBP	13.69	□□□□□ -0.22
MS4A6A-215	ENST00000531914	POGK	Q9P215	609 aa		13.69	□□□□□ -0.22
MS4A6A-215	ENST00000531914	SPATA31A6	Q5VVP1	1343 aa		13.68	□□□□□ -0.22
MS4A6A-215	ENST00000531914	USP32	Q8NFA0	1604 aa		13.68	□□□□□ -0.22
MS4A6A-215	ENST00000531914	ADGRB2	O60241	1585 aa		13.67	□□□□□ -0.22
MS4A6A-215	ENST00000531914	FOXO3	O43524	673 aa		13.67	□□□□□ -0.22
MS4A6A-215	ENST00000531914	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.67	□□□□□ -0.22
MS4A6A-215	ENST00000531914	PNPLA6	Q8IY17	1366 aa		13.67	□□□□□ -0.22
MS4A6A-215	ENST00000531914	PXDN	Q92626	1479 aa		13.67	□□□□□ -0.22
MS4A6A-215	ENST00000531914	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.65	□□□□□ -0.22
MS4A6A-215	ENST00000531914	XPC	Q01831	940 aa	Predicted RBP	13.65	□□□□□ -0.22
MS4A6A-215	ENST00000531914	POTEA	Q6S8J7	498 aa		13.65	□□□□□ -0.22
MS4A6A-215	ENST00000531914	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.64	□□□□□ -0.23
MS4A6A-215	ENST00000531914	NUTM2E	B1AL46	878 aa	Predicted RBP	13.64	□□□□□ -0.23
MS4A6A-215	ENST00000531914	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.64	□□□□□ -0.23
MS4A6A-215	ENST00000531914	LHX6	Q9UPM6	363 aa		13.64	□□□□□ -0.23
MS4A6A-215	ENST00000531914	NPHP3	Q7Z494	1330 aa		13.64	□□□□□ -0.23
MS4A6A-215	ENST00000531914	PRR36	Q9H6K5	1346 aa		13.64	□□□□□ -0.23
MS4A6A-215	ENST00000531914	KIF1A	Q12756	1690 aa		13.63	□□□□□ -0.23
MS4A6A-215	ENST00000531914	WASL	O00401	505 aa	Predicted RBP	13.63	□□□□□ -0.23
MS4A6A-215	ENST00000531914	PBX2	P40425	430 aa		13.63	□□□□□ -0.23
MS4A6A-215	ENST00000531914	NBPF8	Q3BBV2	869 aa		13.63	□□□□□ -0.23
MS4A6A-215	ENST00000531914	TRPM1	Q7Z4N2	1603 aa		13.63	□□□□□ -0.23
MS4A6A-215	ENST00000531914	SOCS7	O14512	581 aa		13.62	□□□□□ -0.23
MS4A6A-215	ENST00000531914	LSM11	P83369	360 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
MS4A6A-215	ENST00000531914	ANKAR	Q7Z5J8	1434 aa		13.62	□□□□□ -0.23
MS4A6A-215	ENST00000531914	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.61	□□□□□ -0.23
MS4A6A-215	ENST00000531914	RYDEN	Q9NUL5	291 aa	Known RBP	13.61	□□□□□ -0.23
MS4A6A-215	ENST00000531914	TULP4	Q9NRJ4	1543 aa		13.6	□□□□□ -0.23
MS4A6A-215	ENST00000531914	PSD	A5PKW4	1024 aa	Predicted RBP	13.59	□□□□□ -0.23
MS4A6A-215	ENST00000531914	MEX3C	Q5U5Q3	659 aa	Known RBP	13.59	□□□□□ -0.23
MS4A6A-215	ENST00000531914	KRT28	Q7Z3Y7	464 aa		13.59	□□□□□ -0.23
MS4A6A-215	ENST00000531914	PMFBP1	Q8TBY8	1022 aa		13.59	□□□□□ -0.23
MS4A6A-215	ENST00000531914	SPATA31A3	Q5VYP0	1347 aa		13.59	□□□□□ -0.23
MS4A6A-215	ENST00000531914	PLPP6	Q8IY26	295 aa		13.58	□□□□□ -0.24
MS4A6A-215	ENST00000531914	CDK19	Q9BWU1	502 aa		13.58	□□□□□ -0.24
MS4A6A-215	ENST00000531914	ATP7B	P35670	1465 aa		13.57	□□□□□ -0.24
MS4A6A-215	ENST00000531914	ADAMTS2	O95450	1211 aa		13.57	□□□□□ -0.24
MS4A6A-215	ENST00000531914	FOXK1	P85037	733 aa		13.57	□□□□□ -0.24
MS4A6A-215	ENST00000531914	NUDT16	Q96DE0	195 aa	Known RBP	13.57	□□□□□ -0.24
MS4A6A-215	ENST00000531914	PCGF6	Q9BYE7	350 aa		13.57	□□□□□ -0.24
MS4A6A-215	ENST00000531914	GPHN	Q9NQX3	736 aa	Predicted RBP	13.57	□□□□□ -0.24
MS4A6A-215	ENST00000531914	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.56	□□□□□ -0.24
MS4A6A-215	ENST00000531914	PSME1	Q06323	249 aa		13.56	□□□□□ -0.24
MS4A6A-215	ENST00000531914	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.56	□□□□□ -0.24
MS4A6A-215	ENST00000531914	QRICH2	Q9H0J4	1663 aa		13.56	□□□□□ -0.24
MS4A6A-215	ENST00000531914	TBC1D12	O60347	775 aa		13.55	□□□□□ -0.24
MS4A6A-215	ENST00000531914	C8orf37	Q96NL8	207 aa		13.55	□□□□□ -0.24
MS4A6A-215	ENST00000531914	AFF2	P51816	1311 aa		13.55	□□□□□ -0.24
MS4A6A-215	ENST00000531914	SBNO1	A3KN83	1393 aa		13.55	□□□□□ -0.24
MS4A6A-215	ENST00000531914	ROCK2	O75116	1388 aa	Known RBP	13.55	□□□□□ -0.24
MS4A6A-215	ENST00000531914	EIF3A	Q14152	1382 aa	Known RBP	13.55	□□□□□ -0.24
MS4A6A-215	ENST00000531914	GPRASP1	Q5JY77	1395 aa		13.55	□□□□□ -0.24
MS4A6A-215	ENST00000531914	TOPAZ1	Q8N9V7	1692 aa		13.54	□□□□□ -0.24
MS4A6A-215	ENST00000531914	ITSN1	Q15811	1721 aa		13.54	□□□□□ -0.24
MS4A6A-215	ENST00000531914	MARF1	Q9Y4F3	1742 aa	Known RBP	13.54	□□□□□ -0.24
MS4A6A-215	ENST00000531914	ZNF772	Q68DY9	489 aa	Predicted RBP	13.54	□□□□□ -0.24
MS4A6A-215	ENST00000531914	PTCD2	Q8WV60	388 aa	Known RBP	13.54	□□□□□ -0.24
MS4A6A-215	ENST00000531914	AXIN2	Q9Y2T1	843 aa		13.54	□□□□□ -0.24
MS4A6A-215	ENST00000531914	TONSL	Q96HA7	1378 aa		13.54	□□□□□ -0.24
MS4A6A-215	ENST00000531914	TNS3	Q68CZ2	1445 aa		13.54	□□□□□ -0.24
MS4A6A-215	ENST00000531914	CABLES1	Q8TDN4	633 aa		13.52	□□□□□ -0.25
MS4A6A-215	ENST00000531914	NGLY1	Q96IV0	654 aa		13.52	□□□□□ -0.25
MS4A6A-215	ENST00000531914	ALS2	Q96Q42	1657 aa		13.52	□□□□□ -0.25
MS4A6A-215	ENST00000531914	PLEKHG3	A1L390	1219 aa		13.51	□□□□□ -0.25
MS4A6A-215	ENST00000531914	DSG2	Q14126	1118 aa		13.51	□□□□□ -0.25
MS4A6A-215	ENST00000531914	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.51	□□□□□ -0.25
MS4A6A-215	ENST00000531914	NGDN	Q8NEJ9	315 aa	Known RBP	13.51	□□□□□ -0.25
MS4A6A-215	ENST00000531914	ABCA3	Q99758	1704 aa		13.5	□□□□□ -0.25
MS4A6A-215	ENST00000531914	RALGAPB	Q86X10	1494 aa		13.5	□□□□□ -0.25
MS4A6A-215	ENST00000531914	POLR3A	O14802	1390 aa	Predicted RBP	13.5	□□□□□ -0.25
MS4A6A-215	ENST00000531914	ACE	P12821	1306 aa		13.49	□□□□□ -0.25
MS4A6A-215	ENST00000531914	ARHGAP33	O14559	1287 aa		13.49	□□□□□ -0.25
MS4A6A-215	ENST00000531914	SRPK2	P78362	688 aa	Known RBP	13.49	□□□□□ -0.25
MS4A6A-215	ENST00000531914	LMOD2	Q6P5Q4	547 aa		13.49	□□□□□ -0.25
MS4A6A-215	ENST00000531914	QTRT2	Q9H974	415 aa	Known RBP	13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms