RNA–Protein interactions for RNA: ENST00000530749.5

RDX-211, Transcript of radixin, humanhuman

TSL 2

Gene RDX, Length 2,558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-211ENST00000530749 USP6P35125 1406 aa27.78■■■□□ 2.04
RDX-211ENST00000530749 FAM83GA6ND36 823 aa27.77■■■□□ 2.04
RDX-211ENST00000530749 AEBP1Q8IUX7 1158 aa27.77■■■□□ 2.04
RDX-211ENST00000530749 DLG5Q8TDM6 1919 aa27.77■■■□□ 2.04
RDX-211ENST00000530749 NBR1Q14596 966 aa27.76■■■□□ 2.03
RDX-211ENST00000530749 ATF7IPQ6VMQ6 1270 aa27.76■■■□□ 2.03
RDX-211ENST00000530749 TBX22Q9Y458 520 aa27.76■■■□□ 2.03
RDX-211ENST00000530749 RGPD8O14715 1765 aaPredicted RBP27.76■■■□□ 2.03
RDX-211ENST00000530749 ITPRIPQ8IWB1 547 aa27.75■■■□□ 2.03
RDX-211ENST00000530749 THEMISQ8N1K5 641 aaPredicted RBP27.75■■■□□ 2.03
RDX-211ENST00000530749 DCTN1Q14203 1278 aa27.75■■■□□ 2.03
RDX-211ENST00000530749 OVOS2A0A0J9YW53 1432 aa27.75■■■□□ 2.03
RDX-211ENST00000530749 OVOS2Q6IE36 1432 aa27.75■■■□□ 2.03
RDX-211ENST00000530749 ELL2O00472 640 aaPredicted RBP27.74■■■□□ 2.03
RDX-211ENST00000530749 EIF4A2Q14240 407 aaKnown RBP27.74■■■□□ 2.03
RDX-211ENST00000530749 TSPYL6Q8N831 410 aa27.74■■■□□ 2.03
RDX-211ENST00000530749 HSP90AB2PQ58FF8 381 aa27.72■■■□□ 2.03
RDX-211ENST00000530749 TMEM57Q8N5G2 664 aa27.72■■■□□ 2.03
RDX-211ENST00000530749 SULT6B1Q6IMI4 303 aa27.71■■■□□ 2.03
RDX-211ENST00000530749 MBIPQ9NS73 344 aa27.71■■■□□ 2.03
RDX-211ENST00000530749 PEAK1Q9H792 1746 aa27.7■■■□□ 2.03
RDX-211ENST00000530749 AAMPQ13685 434 aa27.7■■■□□ 2.03
RDX-211ENST00000530749 PDZRN3Q9UPQ7 1066 aa27.7■■■□□ 2.03
RDX-211ENST00000530749 DIP2AQ14689 1571 aa27.69■■■□□ 2.02
RDX-211ENST00000530749 PTCH1Q13635 1447 aa27.68■■■□□ 2.02
RDX-211ENST00000530749 KCNA6P17658 529 aa27.68■■■□□ 2.02
RDX-211ENST00000530749 RWDD1Q9H446 243 aaPredicted RBP27.68■■■□□ 2.02
RDX-211ENST00000530749 SSH2Q76I76 1423 aa27.67■■■□□ 2.02
RDX-211ENST00000530749 VAMP4O75379 141 aa27.67■■■□□ 2.02
RDX-211ENST00000530749 NGDNQ8NEJ9 315 aaKnown RBP27.67■■■□□ 2.02
RDX-211ENST00000530749 KIF16BQ96L93 1317 aa27.67■■■□□ 2.02
RDX-211ENST00000530749 NALCNQ8IZF0 1738 aa27.66■■■□□ 2.02
RDX-211ENST00000530749 ZNF853P0CG23 659 aa27.66■■■□□ 2.02
RDX-211ENST00000530749 IFT57Q9NWB7 429 aa27.66■■■□□ 2.02
RDX-211ENST00000530749 GNAI1P63096 354 aa27.65■■■□□ 2.02
RDX-211ENST00000530749 ALDH1L2Q3SY69 923 aa27.65■■■□□ 2.02
RDX-211ENST00000530749 DDX19BQ9UMR2 479 aa27.65■■■□□ 2.02
RDX-211ENST00000530749 SLC4A3P48751 1232 aa27.65■■■□□ 2.02
RDX-211ENST00000530749 SEC24BO95487 1268 aa27.63■■■□□ 2.01
RDX-211ENST00000530749 CALD1Q05682 793 aaKnown RBP27.63■■■□□ 2.01
RDX-211ENST00000530749 C8orf58Q8NAV2 365 aa27.63■■■□□ 2.01
RDX-211ENST00000530749 XRN1Q8IZH2 1706 aaKnown RBP27.63■■■□□ 2.01
RDX-211ENST00000530749 RBM33Q96EV2 1170 aaKnown RBP27.62■■■□□ 2.01
RDX-211ENST00000530749 VIRMAQ69YN4 1812 aaKnown RBP27.62■■■□□ 2.01
RDX-211ENST00000530749 MAP3K19Q56UN5 1328 aa27.62■■■□□ 2.01
RDX-211ENST00000530749 IPO8O15397 1037 aaKnown RBP27.62■■■□□ 2.01
RDX-211ENST00000530749 USP31Q70CQ4 1352 aa27.62■■■□□ 2.01
RDX-211ENST00000530749 CFAP44Q96MT7 982 aa27.61■■■□□ 2.01
RDX-211ENST00000530749 CEP170BQ9Y4F5 1589 aaPredicted RBP27.61■■■□□ 2.01
RDX-211ENST00000530749 NUTM2GQ5VZR2 741 aa27.6■■■□□ 2.01
RDX-211ENST00000530749 MRPL50Q8N5N7 158 aaKnown RBP27.6■■■□□ 2.01
RDX-211ENST00000530749 LMOD3Q0VAK6 560 aa27.59■■■□□ 2.01
RDX-211ENST00000530749 TWISTNBQ3B726 338 aaPredicted RBP27.59■■■□□ 2.01
RDX-211ENST00000530749 ZBTB40Q9NUA8 1239 aa27.59■■■□□ 2.01
RDX-211ENST00000530749 RIMS1Q86UR5 1692 aaKnown RBP27.59■■■□□ 2.01
RDX-211ENST00000530749 MCM10Q7L590 875 aa27.59■■■□□ 2.01
RDX-211ENST00000530749 KRT24Q2M2I5 525 aa27.57■■■□□ 2
RDX-211ENST00000530749 DDRGK1Q96HY6 314 aa27.57■■■□□ 2
RDX-211ENST00000530749 TTC21AQ8NDW8 1320 aa27.57■■■□□ 2
RDX-211ENST00000530749 PIK3C2AO00443 1686 aa27.56■■■□□ 2
RDX-211ENST00000530749 RGPD1P0DJD0 1748 aa27.55■■■□□ 2
RDX-211ENST00000530749 USP19O94966 1318 aa27.55■■■□□ 2
RDX-211ENST00000530749 ZNF428Q96B54 188 aa27.55■■■□□ 2
RDX-211ENST00000530749 BRPF1P55201 1214 aaPredicted RBP27.54■■■□□ 2
RDX-211ENST00000530749 HDAC1Q13547 482 aaPredicted RBP27.54■■■□□ 2
RDX-211ENST00000530749 FOXO3O43524 673 aa27.53■■■□□ 2
RDX-211ENST00000530749 NLRP6P59044 892 aa27.53■■■□□ 2
RDX-211ENST00000530749 FMN2Q9NZ56 1722 aa27.53■■■□□ 2
RDX-211ENST00000530749 C1orf115Q9H7X2 142 aa27.53■■■□□ 2
RDX-211ENST00000530749 AMPHP49418 695 aa27.51■■□□□ 1.99
RDX-211ENST00000530749 FLT4P35916 1363 aa27.5■■□□□ 1.99
RDX-211ENST00000530749 SBNO1A3KN83 1393 aa27.48■■□□□ 1.99
RDX-211ENST00000530749 ZBTB7BO15156 539 aaPredicted RBP27.48■■□□□ 1.99
RDX-211ENST00000530749 MIS18AQ9NYP9 233 aa27.48■■□□□ 1.99
RDX-211ENST00000530749 EYA1Q99502 592 aa27.47■■□□□ 1.99
RDX-211ENST00000530749 MTHFSDQ2M296 383 aaKnown RBP27.47■■□□□ 1.99
RDX-211ENST00000530749 SMC5Q8IY18 1101 aa27.47■■□□□ 1.99
RDX-211ENST00000530749 C14orf37Q86TY3 774 aa27.46■■□□□ 1.99
RDX-211ENST00000530749 ARHGAP45Q92619 1136 aa27.46■■□□□ 1.99
RDX-211ENST00000530749 ANKLE2Q86XL3 938 aa27.45■■□□□ 1.98
RDX-211ENST00000530749 ANKARQ7Z5J8 1434 aa27.45■■□□□ 1.98
RDX-211ENST00000530749 ARHGEF10O15013 1369 aa27.45■■□□□ 1.98
RDX-211ENST00000530749 PIK3R4Q99570 1358 aa27.45■■□□□ 1.98
RDX-211ENST00000530749 ABTB2Q8N961 1025 aa27.45■■□□□ 1.98
RDX-211ENST00000530749 MARF1Q9Y4F3 1742 aaKnown RBP27.44■■□□□ 1.98
RDX-211ENST00000530749 ABCC4O15439 1325 aa27.44■■□□□ 1.98
RDX-211ENST00000530749 CHL1O00533 1208 aa27.44■■□□□ 1.98
RDX-211ENST00000530749 DAXXQ9UER7 740 aaPredicted RBP27.43■■□□□ 1.98
RDX-211ENST00000530749 CHD2O14647 1828 aaKnown RBP27.42■■□□□ 1.98
RDX-211ENST00000530749 LTV1Q96GA3 475 aaPredicted RBP27.42■■□□□ 1.98
RDX-211ENST00000530749 LNPKQ9C0E8 428 aa27.41■■□□□ 1.98
RDX-211ENST00000530749 IGSF1Q8N6C5 1336 aa27.4■■□□□ 1.98
RDX-211ENST00000530749 CRB1P82279 1406 aa27.4■■□□□ 1.98
RDX-211ENST00000530749 HOXC9P31274 260 aa27.39■■□□□ 1.98
RDX-211ENST00000530749 KDRP35968 1356 aa27.39■■□□□ 1.97
RDX-211ENST00000530749 PHF8Q9UPP1 1060 aa27.38■■□□□ 1.97
RDX-211ENST00000530749 SIRT2Q8IXJ6 389 aa27.38■■□□□ 1.97
RDX-211ENST00000530749 RTL5Q5HYW3 569 aaPredicted RBP27.37■■□□□ 1.97
RDX-211ENST00000530749 NUCB1Q02818 461 aa27.36■■□□□ 1.97
RDX-211ENST00000530749 API5Q9BZZ5 524 aaKnown RBP27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms