RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 OVOS2A0A0J9YW53 1432 aa10.06□□□□□ -0.8
SOX6-211ENST00000528429 OVOS2Q6IE36 1432 aa10.06□□□□□ -0.8
SOX6-211ENST00000528429 NEFMP07197 916 aa10.05□□□□□ -0.8
SOX6-211ENST00000528429 NGEFQ8N5V2 710 aa10.05□□□□□ -0.8
SOX6-211ENST00000528429 PHF23Q9BUL5 403 aaPredicted RBP10.05□□□□□ -0.8
SOX6-211ENST00000528429 SSH2Q76I76 1423 aa10.05□□□□□ -0.8
SOX6-211ENST00000528429 FMN2Q9NZ56 1722 aa10.05□□□□□ -0.8
SOX6-211ENST00000528429 E9PSI1 815 aa10.05□□□□□ -0.8
SOX6-211ENST00000528429 CDK11BP21127 795 aaKnown RBP10.05□□□□□ -0.8
SOX6-211ENST00000528429 RRP1P56182 461 aaKnown RBP10.05□□□□□ -0.8
SOX6-211ENST00000528429 LMOD2Q6P5Q4 547 aa10.05□□□□□ -0.8
SOX6-211ENST00000528429 TMEM94Q12767 1356 aa10.05□□□□□ -0.8
SOX6-211ENST00000528429 PLIN1O60240 522 aa10.04□□□□□ -0.8
SOX6-211ENST00000528429 IL13P35225 146 aa10.04□□□□□ -0.8
SOX6-211ENST00000528429 HSP90AB2PQ58FF8 381 aa10.04□□□□□ -0.8
SOX6-211ENST00000528429 PLEKHF1Q96S99 279 aa10.04□□□□□ -0.8
SOX6-211ENST00000528429 C19orf44Q9H6X5 657 aa10.04□□□□□ -0.8
SOX6-211ENST00000528429 NRKQ7Z2Y5 1582 aa10.04□□□□□ -0.8
SOX6-211ENST00000528429 MAP2P11137 1827 aaKnown RBP10.04□□□□□ -0.8
SOX6-211ENST00000528429 ATF3P18847 181 aa10.04□□□□□ -0.8
SOX6-211ENST00000528429 TMPOP42166 694 aaKnown RBP10.04□□□□□ -0.8
SOX6-211ENST00000528429 TMEM132AQ24JP5 1023 aa10.04□□□□□ -0.8
SOX6-211ENST00000528429 CDK12Q9NYV4 1490 aaPredicted RBP10.04□□□□□ -0.8
SOX6-211ENST00000528429 MAP3K19Q56UN5 1328 aa10.04□□□□□ -0.8
SOX6-211ENST00000528429 FCHSD2O94868 740 aa10.03□□□□□ -0.8
SOX6-211ENST00000528429 AMPHP49418 695 aa10.03□□□□□ -0.8
SOX6-211ENST00000528429 IQSEC2Q5JU85 1478 aa10.03□□□□□ -0.8
SOX6-211ENST00000528429 RNF123Q5XPI4 1314 aa10.03□□□□□ -0.8
SOX6-211ENST00000528429 ZBTB7CA1YPR0 619 aa10.03□□□□□ -0.8
SOX6-211ENST00000528429 RIPK4P57078 832 aa10.03□□□□□ -0.8
SOX6-211ENST00000528429 PNNQ9H307 717 aaKnown RBP10.03□□□□□ -0.8
SOX6-211ENST00000528429 LMTK3Q96Q04 1460 aa10.02□□□□□ -0.8
SOX6-211ENST00000528429 EIF4A2Q14240 407 aaKnown RBP10.02□□□□□ -0.8
SOX6-211ENST00000528429 NAP1L5Q96NT1 182 aaPredicted RBP10.02□□□□□ -0.8
SOX6-211ENST00000528429 USP31Q70CQ4 1352 aa10.02□□□□□ -0.81
SOX6-211ENST00000528429 B4GALNT3Q6L9W6 998 aa10.02□□□□□ -0.81
SOX6-211ENST00000528429 NWD1Q149M9 1564 aa10.02□□□□□ -0.81
SOX6-211ENST00000528429 AEBP1Q8IUX7 1158 aa10.01□□□□□ -0.81
SOX6-211ENST00000528429 PHACTR3Q96KR7 559 aa10.01□□□□□ -0.81
SOX6-211ENST00000528429 CFAP44Q96MT7 982 aa10.01□□□□□ -0.81
SOX6-211ENST00000528429 PPP4R2Q9NY27 417 aa10.01□□□□□ -0.81
SOX6-211ENST00000528429 SULT6B1Q6IMI4 303 aa10.01□□□□□ -0.81
SOX6-211ENST00000528429 LRRC7Q96NW7 1537 aa10.01□□□□□ -0.81
SOX6-211ENST00000528429 TRMT2AQ8IZ69 625 aaKnown RBP10□□□□□ -0.81
SOX6-211ENST00000528429 IGSF3O75054 1194 aa10□□□□□ -0.81
SOX6-211ENST00000528429 CCDC27Q2M243 656 aa10□□□□□ -0.81
SOX6-211ENST00000528429 WDR63Q8IWG1 891 aa10□□□□□ -0.81
SOX6-211ENST00000528429 DDX17Q92841 729 aaKnown RBP10□□□□□ -0.81
SOX6-211ENST00000528429 LTV1Q96GA3 475 aaPredicted RBP10□□□□□ -0.81
SOX6-211ENST00000528429 TRIM35Q9UPQ4 493 aa10□□□□□ -0.81
SOX6-211ENST00000528429 PIK3C2AO00443 1686 aa10□□□□□ -0.81
SOX6-211ENST00000528429 PLCB2Q00722 1185 aa10□□□□□ -0.81
SOX6-211ENST00000528429 TSR2Q969E8 191 aaKnown RBP10□□□□□ -0.81
SOX6-211ENST00000528429 ZNF335Q9H4Z2 1342 aaPredicted RBP9.99□□□□□ -0.81
SOX6-211ENST00000528429 C1orf167Q5SNV9 1468 aa9.99□□□□□ -0.81
SOX6-211ENST00000528429 KRT28Q7Z3Y7 464 aa9.99□□□□□ -0.81
SOX6-211ENST00000528429 FLT4P35916 1363 aa9.99□□□□□ -0.81
SOX6-211ENST00000528429 EXOC6Q8TAG9 804 aa9.99□□□□□ -0.81
SOX6-211ENST00000528429 THUMPD2Q9BTF0 503 aaKnown RBP9.99□□□□□ -0.81
SOX6-211ENST00000528429 MYH16Q9H6N6 1097 aa9.99□□□□□ -0.81
SOX6-211ENST00000528429 LAS1LQ9Y4W2 734 aaKnown RBP9.99□□□□□ -0.81
SOX6-211ENST00000528429 SBNO1A3KN83 1393 aa9.98□□□□□ -0.81
SOX6-211ENST00000528429 CADPS2Q86UW7 1296 aa9.98□□□□□ -0.81
SOX6-211ENST00000528429 MSH6P52701 1360 aa9.98□□□□□ -0.81
SOX6-211ENST00000528429 BCAR3O75815 825 aa9.98□□□□□ -0.81
SOX6-211ENST00000528429 NFE2L2Q16236 605 aa9.98□□□□□ -0.81
SOX6-211ENST00000528429 C20orf194Q5TEA3 1177 aa9.97□□□□□ -0.81
SOX6-211ENST00000528429 HOXC9P31274 260 aa9.97□□□□□ -0.81
SOX6-211ENST00000528429 VSIG10Q8N0Z9 540 aa9.97□□□□□ -0.81
SOX6-211ENST00000528429 BCL2L13Q9BXK5 485 aa9.97□□□□□ -0.81
SOX6-211ENST00000528429 STRCP1A6NGW2 1772 aa9.96□□□□□ -0.81
SOX6-211ENST00000528429 PEAK1Q9H792 1746 aa9.96□□□□□ -0.81
SOX6-211ENST00000528429 CANXP27824 592 aaKnown RBP9.96□□□□□ -0.81
SOX6-211ENST00000528429 MST1RQ04912 1400 aa9.96□□□□□ -0.82
SOX6-211ENST00000528429 FANCIQ9NVI1 1328 aa9.96□□□□□ -0.82
SOX6-211ENST00000528429 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.96□□□□□ -0.82
SOX6-211ENST00000528429 FAM83GA6ND36 823 aa9.95□□□□□ -0.82
SOX6-211ENST00000528429 DCTN1Q14203 1278 aa9.95□□□□□ -0.82
SOX6-211ENST00000528429 FRAT1Q92837 279 aaPredicted RBP9.95□□□□□ -0.82
SOX6-211ENST00000528429 CRBNQ96SW2 442 aa9.95□□□□□ -0.82
SOX6-211ENST00000528429 EYA1Q99502 592 aa9.95□□□□□ -0.82
SOX6-211ENST00000528429 GCP02774 474 aa9.94□□□□□ -0.82
SOX6-211ENST00000528429 EXOSC9Q06265 439 aaKnown RBP9.94□□□□□ -0.82
SOX6-211ENST00000528429 KCNH5Q8NCM2 988 aa9.94□□□□□ -0.82
SOX6-211ENST00000528429 STRCQ7RTU9 1775 aa9.94□□□□□ -0.82
SOX6-211ENST00000528429 USHBP1Q8N6Y0 703 aa9.94□□□□□ -0.82
SOX6-211ENST00000528429 DCCP43146 1447 aa9.93□□□□□ -0.82
SOX6-211ENST00000528429 NPHP3Q7Z494 1330 aa9.93□□□□□ -0.82
SOX6-211ENST00000528429 LMOD3Q0VAK6 560 aa9.93□□□□□ -0.82
SOX6-211ENST00000528429 GLIPR1L2Q4G1C9 344 aa9.93□□□□□ -0.82
SOX6-211ENST00000528429 ARHGEF10O15013 1369 aa9.93□□□□□ -0.82
SOX6-211ENST00000528429 NCOA3Q9Y6Q9 1424 aa9.92□□□□□ -0.82
SOX6-211ENST00000528429 RARSP54136 660 aaKnown RBP9.92□□□□□ -0.82
SOX6-211ENST00000528429 ZC3H6P61129 1189 aaKnown RBP9.92□□□□□ -0.82
SOX6-211ENST00000528429 IL16Q14005 1332 aa9.92□□□□□ -0.82
SOX6-211ENST00000528429 IGSF1Q8N6C5 1336 aa9.92□□□□□ -0.82
SOX6-211ENST00000528429 CABLES1Q8TDN4 633 aa9.92□□□□□ -0.82
SOX6-211ENST00000528429 IP6K1Q92551 441 aa9.92□□□□□ -0.82
SOX6-211ENST00000528429 CALD1Q05682 793 aaKnown RBP9.91□□□□□ -0.82
SOX6-211ENST00000528429 MCM10Q7L590 875 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms