RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 POLKQ9UBT6 870 aa18.5■□□□□ 0.55
USP47-207ENST00000527733 ADCY10Q96PN6 1610 aa18.5■□□□□ 0.55
USP47-207ENST00000527733 CLASRPQ8N2M8 674 aaKnown RBP18.5■□□□□ 0.55
USP47-207ENST00000527733 ANKRD24Q8TF21 1146 aa18.49■□□□□ 0.55
USP47-207ENST00000527733 C1orf115Q9H7X2 142 aa18.49■□□□□ 0.55
USP47-207ENST00000527733 FANCIQ9NVI1 1328 aa18.49■□□□□ 0.55
USP47-207ENST00000527733 POLR3AO14802 1390 aaPredicted RBP18.49■□□□□ 0.55
USP47-207ENST00000527733 ZRANB1Q9UGI0 708 aa18.49■□□□□ 0.55
USP47-207ENST00000527733 MYL6BP14649 208 aa18.49■□□□□ 0.55
USP47-207ENST00000527733 RARSP54136 660 aaKnown RBP18.49■□□□□ 0.55
USP47-207ENST00000527733 GCC1Q96CN9 775 aa18.49■□□□□ 0.55
USP47-207ENST00000527733 GBP4Q96PP9 640 aa18.49■□□□□ 0.55
USP47-207ENST00000527733 LTKP29376 864 aa18.48■□□□□ 0.55
USP47-207ENST00000527733 CDC42BPAQ5VT25 1732 aa18.48■□□□□ 0.55
USP47-207ENST00000527733 ALDH1L2Q3SY69 923 aa18.48■□□□□ 0.55
USP47-207ENST00000527733 SSH1Q8WYL5 1049 aa18.48■□□□□ 0.55
USP47-207ENST00000527733 GNL2Q13823 731 aaKnown RBP18.48■□□□□ 0.55
USP47-207ENST00000527733 MPRIPQ6WCQ1 1025 aa18.48■□□□□ 0.55
USP47-207ENST00000527733 TSPOAP1O95153 1857 aa18.47■□□□□ 0.55
USP47-207ENST00000527733 NKTRP30414 1462 aaKnown RBP18.47■□□□□ 0.55
USP47-207ENST00000527733 CHRNA2Q15822 529 aa18.47■□□□□ 0.55
USP47-207ENST00000527733 TOMM22Q9NS69 142 aa18.47■□□□□ 0.55
USP47-207ENST00000527733 NEUROD6Q96NK8 337 aa18.47■□□□□ 0.55
USP47-207ENST00000527733 NOL8Q76FK4 1167 aaKnown RBP18.46■□□□□ 0.55
USP47-207ENST00000527733 TOM1O60784 492 aa18.46■□□□□ 0.55
USP47-207ENST00000527733 VPS37DQ86XT2 251 aa18.46■□□□□ 0.55
USP47-207ENST00000527733 TRIM44Q96DX7 344 aaPredicted RBP18.46■□□□□ 0.55
USP47-207ENST00000527733 PDZRN3Q9UPQ7 1066 aa18.46■□□□□ 0.55
USP47-207ENST00000527733 INTS3Q68E01 1043 aaKnown RBP18.45■□□□□ 0.54
USP47-207ENST00000527733 SIRT1Q96EB6 747 aa18.45■□□□□ 0.54
USP47-207ENST00000527733 IL16Q14005 1332 aa18.45■□□□□ 0.54
USP47-207ENST00000527733 TMOD3Q9NYL9 352 aa18.44■□□□□ 0.54
USP47-207ENST00000527733 SPATA31E1Q6ZUB1 1445 aa18.44■□□□□ 0.54
USP47-207ENST00000527733 NGLY1Q96IV0 654 aa18.44■□□□□ 0.54
USP47-207ENST00000527733 NPC1L1Q9UHC9 1359 aa18.44■□□□□ 0.54
USP47-207ENST00000527733 PTPRTO14522 1441 aa18.44■□□□□ 0.54
USP47-207ENST00000527733 PIK3C2GO75747 1445 aa18.44■□□□□ 0.54
USP47-207ENST00000527733 FAM177BA6PVY3 158 aa18.44■□□□□ 0.54
USP47-207ENST00000527733 ZKSCAN1P17029 563 aaPredicted RBP18.44■□□□□ 0.54
USP47-207ENST00000527733 PTCD1O75127 700 aaKnown RBP18.43■□□□□ 0.54
USP47-207ENST00000527733 EIF4A2Q14240 407 aaKnown RBP18.43■□□□□ 0.54
USP47-207ENST00000527733 IFNL2Q8IZJ0 200 aa18.43■□□□□ 0.54
USP47-207ENST00000527733 ANO2Q9NQ90 1003 aa18.43■□□□□ 0.54
USP47-207ENST00000527733 TMEM57Q8N5G2 664 aa18.43■□□□□ 0.54
USP47-207ENST00000527733 FLT4P35916 1363 aa18.43■□□□□ 0.54
USP47-207ENST00000527733 STARD3NLO95772 234 aa18.42■□□□□ 0.54
USP47-207ENST00000527733 ERC1Q8IUD2 1116 aa18.42■□□□□ 0.54
USP47-207ENST00000527733 EXOC5O00471 708 aa18.41■□□□□ 0.54
USP47-207ENST00000527733 ZFYVE9O95405 1425 aa18.41■□□□□ 0.54
USP47-207ENST00000527733 FAM83GA6ND36 823 aa18.41■□□□□ 0.54
USP47-207ENST00000527733 PLXNC1O60486 1568 aa18.41■□□□□ 0.54
USP47-207ENST00000527733 GCP02774 474 aa18.41■□□□□ 0.54
USP47-207ENST00000527733 RPAP2Q8IXW5 612 aaPredicted RBP18.41■□□□□ 0.54
USP47-207ENST00000527733 CDC45O75419 566 aa18.4■□□□□ 0.54
USP47-207ENST00000527733 PTMSP20962 102 aa18.4■□□□□ 0.54
USP47-207ENST00000527733 KIF3AQ9Y496 699 aa18.4■□□□□ 0.54
USP47-207ENST00000527733 UBAP1LF5GYI3 381 aa18.4■□□□□ 0.54
USP47-207ENST00000527733 FOXD4L1Q9NU39 408 aa18.4■□□□□ 0.54
USP47-207ENST00000527733 HTATSF1O43719 755 aaKnown RBP18.39■□□□□ 0.54
USP47-207ENST00000527733 PTMAP06454 111 aaKnown RBP18.39■□□□□ 0.54
USP47-207ENST00000527733 SBNO2Q9Y2G9 1366 aa18.39■□□□□ 0.54
USP47-207ENST00000527733 EFCAB6Q5THR3 1501 aa18.39■□□□□ 0.53
USP47-207ENST00000527733 EDC4Q6P2E9 1401 aaKnown RBP18.39■□□□□ 0.53
USP47-207ENST00000527733 CCDC27Q2M243 656 aa18.39■□□□□ 0.53
USP47-207ENST00000527733 AEBP1Q8IUX7 1158 aa18.39■□□□□ 0.53
USP47-207ENST00000527733 RNF20Q5VTR2 975 aa18.38■□□□□ 0.53
USP47-207ENST00000527733 NOL10Q9BSC4 688 aaKnown RBP18.38■□□□□ 0.53
USP47-207ENST00000527733 CHMP4CQ96CF2 233 aa18.38■□□□□ 0.53
USP47-207ENST00000527733 MBIPQ9NS73 344 aa18.38■□□□□ 0.53
USP47-207ENST00000527733 UGGT1Q9NYU2 1555 aa18.37■□□□□ 0.53
USP47-207ENST00000527733 MAP3K19Q56UN5 1328 aa18.37■□□□□ 0.53
USP47-207ENST00000527733 ERVK-7P63135 1459 aa18.37■□□□□ 0.53
USP47-207ENST00000527733 APPP05067 770 aa18.37■□□□□ 0.53
USP47-207ENST00000527733 FMNL2Q96PY5 1086 aa18.37■□□□□ 0.53
USP47-207ENST00000527733 DBF4Q9UBU7 674 aaPredicted RBP18.37■□□□□ 0.53
USP47-207ENST00000527733 SRGAP3O43295 1099 aa18.37■□□□□ 0.53
USP47-207ENST00000527733 CNTROBQ8N137 903 aa18.37■□□□□ 0.53
USP47-207ENST00000527733 PHF23Q9BUL5 403 aaPredicted RBP18.37■□□□□ 0.53
USP47-207ENST00000527733 PRDM15P57071 1507 aaPredicted RBP18.36■□□□□ 0.53
USP47-207ENST00000527733 PLEKHG3A1L390 1219 aa18.36■□□□□ 0.53
USP47-207ENST00000527733 PLCB2Q00722 1185 aa18.36■□□□□ 0.53
USP47-207ENST00000527733 LARP1Q6PKG0 1096 aaKnown RBP18.36■□□□□ 0.53
USP47-207ENST00000527733 CABLES1Q8TDN4 633 aa18.36■□□□□ 0.53
USP47-207ENST00000527733 ORAI2Q96SN7 254 aa18.36■□□□□ 0.53
USP47-207ENST00000527733 LRRCC1Q9C099 1032 aa18.36■□□□□ 0.53
USP47-207ENST00000527733 PLA2R1Q13018 1463 aa18.36■□□□□ 0.53
USP47-207ENST00000527733 ABCC3O15438 1527 aa18.35■□□□□ 0.53
USP47-207ENST00000527733 MYOM2P54296 1465 aa18.35■□□□□ 0.53
USP47-207ENST00000527733 C22orf23Q9BZE7 217 aa18.35■□□□□ 0.53
USP47-207ENST00000527733 C20orf194Q5TEA3 1177 aa18.35■□□□□ 0.53
USP47-207ENST00000527733 PLEKHG1Q9ULL1 1385 aa18.34■□□□□ 0.53
USP47-207ENST00000527733 ARHGAP31Q2M1Z3 1444 aa18.34■□□□□ 0.53
USP47-207ENST00000527733 ABCA9Q8IUA7 1624 aa18.34■□□□□ 0.53
USP47-207ENST00000527733 HMGB2P26583 209 aaKnown RBP18.33■□□□□ 0.53
USP47-207ENST00000527733 FSD1Q9BTV5 496 aa18.33■□□□□ 0.53
USP47-207ENST00000527733 CNNM1Q9NRU3 951 aa18.33■□□□□ 0.53
USP47-207ENST00000527733 IP6K1Q92551 441 aa18.33■□□□□ 0.53
USP47-207ENST00000527733 HYPKQ9NX55 129 aa18.33■□□□□ 0.53
USP47-207ENST00000527733 CCDC57Q2TAC2 916 aa18.33■□□□□ 0.52
USP47-207ENST00000527733 EYA1Q99502 592 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 161.4 ms