RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 LNPKQ9C0E8 428 aa14.69□□□□□ -0.06
LINC01001-201ENST00000526704 VAMP4O75379 141 aa14.68□□□□□ -0.06
LINC01001-201ENST00000526704 NCOA3Q9Y6Q9 1424 aa14.68□□□□□ -0.06
LINC01001-201ENST00000526704 IL13P35225 146 aa14.68□□□□□ -0.06
LINC01001-201ENST00000526704 CHD1LQ86WJ1 897 aa14.68□□□□□ -0.06
LINC01001-201ENST00000526704 TSPYL6Q8N831 410 aa14.67□□□□□ -0.06
LINC01001-201ENST00000526704 UBE2Q2Q8WVN8 375 aa14.67□□□□□ -0.06
LINC01001-201ENST00000526704 ZBTB7BO15156 539 aaPredicted RBP14.67□□□□□ -0.06
LINC01001-201ENST00000526704 ZNF853P0CG23 659 aa14.67□□□□□ -0.06
LINC01001-201ENST00000526704 NME9Q86XW9 330 aa14.67□□□□□ -0.06
LINC01001-201ENST00000526704 IFT57Q9NWB7 429 aa14.67□□□□□ -0.06
LINC01001-201ENST00000526704 AATKQ6ZMQ8 1374 aa14.66□□□□□ -0.06
LINC01001-201ENST00000526704 ABCC4O15439 1325 aa14.66□□□□□ -0.06
LINC01001-201ENST00000526704 CALD1Q05682 793 aaKnown RBP14.66□□□□□ -0.06
LINC01001-201ENST00000526704 ARHGAP45Q92619 1136 aa14.66□□□□□ -0.06
LINC01001-201ENST00000526704 MBIPQ9NS73 344 aa14.66□□□□□ -0.06
LINC01001-201ENST00000526704 ZRANB1Q9UGI0 708 aa14.66□□□□□ -0.06
LINC01001-201ENST00000526704 RBM25P49756 843 aaKnown RBP14.65□□□□□ -0.06
LINC01001-201ENST00000526704 GNAI1P63096 354 aa14.65□□□□□ -0.06
LINC01001-201ENST00000526704 C1orf115Q9H7X2 142 aa14.65□□□□□ -0.06
LINC01001-201ENST00000526704 WASLO00401 505 aaPredicted RBP14.65□□□□□ -0.06
LINC01001-201ENST00000526704 MCM4P33991 863 aa14.65□□□□□ -0.06
LINC01001-201ENST00000526704 CHMP5Q9NZZ3 219 aa14.65□□□□□ -0.06
LINC01001-201ENST00000526704 METP08581 1390 aa14.64□□□□□ -0.07
LINC01001-201ENST00000526704 HSCBQ8IWL3 235 aa14.64□□□□□ -0.07
LINC01001-201ENST00000526704 ZNF692Q9BU19 519 aaPredicted RBP14.64□□□□□ -0.07
LINC01001-201ENST00000526704 PPP6R1Q9UPN7 881 aa14.64□□□□□ -0.07
LINC01001-201ENST00000526704 BMP2KLQ5H9B9 411 aa14.64□□□□□ -0.07
LINC01001-201ENST00000526704 GCC1Q96CN9 775 aa14.63□□□□□ -0.07
LINC01001-201ENST00000526704 TOPAZ1Q8N9V7 1692 aa14.63□□□□□ -0.07
LINC01001-201ENST00000526704 TECPR2O15040 1411 aa14.62□□□□□ -0.07
LINC01001-201ENST00000526704 SIRT2Q8IXJ6 389 aa14.62□□□□□ -0.07
LINC01001-201ENST00000526704 NALCNQ8IZF0 1738 aa14.62□□□□□ -0.07
LINC01001-201ENST00000526704 ELL2O00472 640 aaPredicted RBP14.62□□□□□ -0.07
LINC01001-201ENST00000526704 DDIT3P35638 169 aa14.62□□□□□ -0.07
LINC01001-201ENST00000526704 TWISTNBQ3B726 338 aaPredicted RBP14.62□□□□□ -0.07
LINC01001-201ENST00000526704 CHMP4BQ9H444 224 aaKnown RBP14.62□□□□□ -0.07
LINC01001-201ENST00000526704 ANKRD45Q5TZF3 282 aa14.61□□□□□ -0.07
LINC01001-201ENST00000526704 SNX21Q969T3 373 aa14.61□□□□□ -0.07
LINC01001-201ENST00000526704 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.61□□□□□ -0.07
LINC01001-201ENST00000526704 NCKAP5LQ9HCH0 1330 aa14.61□□□□□ -0.07
LINC01001-201ENST00000526704 FAM69CQ0P6D2 419 aa14.61□□□□□ -0.07
LINC01001-201ENST00000526704 RRS1Q15050 365 aaKnown RBP14.61□□□□□ -0.07
LINC01001-201ENST00000526704 L1TD1Q5T7N2 865 aaKnown RBP14.61□□□□□ -0.07
LINC01001-201ENST00000526704 C8orf58Q8NAV2 365 aa14.61□□□□□ -0.07
LINC01001-201ENST00000526704 CFAP44Q96MT7 982 aa14.61□□□□□ -0.07
LINC01001-201ENST00000526704 RGPD1P0DJD0 1748 aa14.6□□□□□ -0.07
LINC01001-201ENST00000526704 NUDT16Q96DE0 195 aaKnown RBP14.6□□□□□ -0.07
LINC01001-201ENST00000526704 PEAK1Q9H792 1746 aa14.6□□□□□ -0.07
LINC01001-201ENST00000526704 LMOD3Q0VAK6 560 aa14.6□□□□□ -0.07
LINC01001-201ENST00000526704 COG3Q96JB2 828 aa14.6□□□□□ -0.07
LINC01001-201ENST00000526704 FAM83GA6ND36 823 aa14.59□□□□□ -0.07
LINC01001-201ENST00000526704 TXNDC2Q86VQ3 553 aa14.59□□□□□ -0.07
LINC01001-201ENST00000526704 FAM43AQ8N2R8 423 aa14.59□□□□□ -0.07
LINC01001-201ENST00000526704 UBR1Q8IWV7 1749 aa14.59□□□□□ -0.07
LINC01001-201ENST00000526704 FMN2Q9NZ56 1722 aa14.59□□□□□ -0.07
LINC01001-201ENST00000526704 KIF2CQ99661 725 aa14.59□□□□□ -0.07
LINC01001-201ENST00000526704 FSD2A1L4K1 749 aa14.58□□□□□ -0.08
LINC01001-201ENST00000526704 CYB5RLQ6IPT4 315 aa14.58□□□□□ -0.08
LINC01001-201ENST00000526704 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.58□□□□□ -0.08
LINC01001-201ENST00000526704 KIF24Q5T7B8 1368 aa14.57□□□□□ -0.08
LINC01001-201ENST00000526704 TBC1D9Q6ZT07 1266 aa14.57□□□□□ -0.08
LINC01001-201ENST00000526704 API5Q9BZZ5 524 aaKnown RBP14.57□□□□□ -0.08
LINC01001-201ENST00000526704 RGS12O14924 1447 aa14.57□□□□□ -0.08
LINC01001-201ENST00000526704 PRR36Q9H6K5 1346 aa14.57□□□□□ -0.08
LINC01001-201ENST00000526704 MLECQ14165 292 aa14.57□□□□□ -0.08
LINC01001-201ENST00000526704 DCTN1Q14203 1278 aa14.57□□□□□ -0.08
LINC01001-201ENST00000526704 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.57□□□□□ -0.08
LINC01001-201ENST00000526704 CCDC61Q9Y6R9 512 aa14.57□□□□□ -0.08
LINC01001-201ENST00000526704 TRAK2O60296 914 aa14.56□□□□□ -0.08
LINC01001-201ENST00000526704 ATP10DQ9P241 1426 aa14.55□□□□□ -0.08
LINC01001-201ENST00000526704 GZF1Q9H116 711 aaPredicted RBP14.55□□□□□ -0.08
LINC01001-201ENST00000526704 AK9Q5TCS8 1911 aa14.55□□□□□ -0.08
LINC01001-201ENST00000526704 GOLGA6L3A6NEY3 463 aa14.55□□□□□ -0.08
LINC01001-201ENST00000526704 CD2BP2O95400 341 aaKnown RBP14.55□□□□□ -0.08
LINC01001-201ENST00000526704 SIRT1Q96EB6 747 aa14.55□□□□□ -0.08
LINC01001-201ENST00000526704 RIMS1Q86UR5 1692 aaKnown RBP14.54□□□□□ -0.08
LINC01001-201ENST00000526704 OVOS2A0A0J9YW53 1432 aa14.54□□□□□ -0.08
LINC01001-201ENST00000526704 OVOS2Q6IE36 1432 aa14.54□□□□□ -0.08
LINC01001-201ENST00000526704 DDX11L8A8MPP1 907 aa14.54□□□□□ -0.08
LINC01001-201ENST00000526704 XRCC6P12956 609 aaKnown RBP eCLIP14.54□□□□□ -0.08
LINC01001-201ENST00000526704 AEBP1Q8IUX7 1158 aa14.54□□□□□ -0.08
LINC01001-201ENST00000526704 HSP90AB1P08238 724 aaKnown RBP14.54□□□□□ -0.08
LINC01001-201ENST00000526704 GSPT1P15170 499 aaKnown RBP14.53□□□□□ -0.08
LINC01001-201ENST00000526704 CIZ1Q9ULV3 898 aaPredicted RBP14.53□□□□□ -0.08
LINC01001-201ENST00000526704 KIF13AQ9H1H9 1805 aa14.53□□□□□ -0.08
LINC01001-201ENST00000526704 CDC45O75419 566 aa14.53□□□□□ -0.08
LINC01001-201ENST00000526704 EIF4A2Q14240 407 aaKnown RBP14.53□□□□□ -0.08
LINC01001-201ENST00000526704 ARXQ96QS3 562 aa14.53□□□□□ -0.08
LINC01001-201ENST00000526704 ROBO2Q9HCK4 1378 aa14.53□□□□□ -0.08
LINC01001-201ENST00000526704 TNPO1Q92973 898 aaKnown RBP14.52□□□□□ -0.08
LINC01001-201ENST00000526704 INTS3Q68E01 1043 aaKnown RBP14.52□□□□□ -0.09
LINC01001-201ENST00000526704 PLEKHM2Q8IWE5 1019 aa14.52□□□□□ -0.09
LINC01001-201ENST00000526704 RAB3GAP1Q15042 981 aa14.51□□□□□ -0.09
LINC01001-201ENST00000526704 KRT24Q2M2I5 525 aa14.51□□□□□ -0.09
LINC01001-201ENST00000526704 DCTPP1Q9H773 170 aa14.51□□□□□ -0.09
LINC01001-201ENST00000526704 MSH6P52701 1360 aa14.51□□□□□ -0.09
LINC01001-201ENST00000526704 SULT6B1Q6IMI4 303 aa14.51□□□□□ -0.09
LINC01001-201ENST00000526704 RBM42Q9BTD8 480 aaKnown RBP14.51□□□□□ -0.09
LINC01001-201ENST00000526704 ADAMTS13Q76LX8 1427 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms