RNA–Protein interactions for RNA: ENST00000526631.1

CCDC90B-207, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 628 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-207ENST00000526631 NGLY1Q96IV0 654 aa11.78□□□□□ -0.52
CCDC90B-207ENST00000526631 DLC1Q96QB1 1528 aa11.77□□□□□ -0.52
CCDC90B-207ENST00000526631 RXRBP28702 533 aa11.77□□□□□ -0.53
CCDC90B-207ENST00000526631 WAPLQ7Z5K2 1190 aa11.77□□□□□ -0.53
CCDC90B-207ENST00000526631 ORAI2Q96SN7 254 aa11.77□□□□□ -0.53
CCDC90B-207ENST00000526631 RGS17Q9UGC6 210 aaPredicted RBP11.77□□□□□ -0.53
CCDC90B-207ENST00000526631 KDM2AQ9Y2K7 1162 aa11.77□□□□□ -0.53
CCDC90B-207ENST00000526631 KIF1AQ12756 1690 aa11.77□□□□□ -0.53
CCDC90B-207ENST00000526631 ARHGAP33O14559 1287 aa11.76□□□□□ -0.53
CCDC90B-207ENST00000526631 KCTD12Q96CX2 325 aaKnown RBP11.76□□□□□ -0.53
CCDC90B-207ENST00000526631 PHF8Q9UPP1 1060 aa11.76□□□□□ -0.53
CCDC90B-207ENST00000526631 PNPLA6Q8IY17 1366 aa11.76□□□□□ -0.53
CCDC90B-207ENST00000526631 DMRTA1Q5VZB9 504 aa11.75□□□□□ -0.53
CCDC90B-207ENST00000526631 POTEAQ6S8J7 498 aa11.75□□□□□ -0.53
CCDC90B-207ENST00000526631 PRAM1Q96QH2 718 aa11.75□□□□□ -0.53
CCDC90B-207ENST00000526631 KIF3CO14782 793 aa11.74□□□□□ -0.53
CCDC90B-207ENST00000526631 SOX12O15370 315 aa11.74□□□□□ -0.53
CCDC90B-207ENST00000526631 FOXO3O43524 673 aa11.74□□□□□ -0.53
CCDC90B-207ENST00000526631 HAP1P54257 671 aaPredicted RBP11.74□□□□□ -0.53
CCDC90B-207ENST00000526631 CIZ1Q9ULV3 898 aaPredicted RBP11.74□□□□□ -0.53
CCDC90B-207ENST00000526631 ANKARQ7Z5J8 1434 aa11.74□□□□□ -0.53
CCDC90B-207ENST00000526631 AFF2P51816 1311 aa11.73□□□□□ -0.53
CCDC90B-207ENST00000526631 RBM6P78332 1123 aaKnown RBP11.73□□□□□ -0.53
CCDC90B-207ENST00000526631 GPRASP1Q5JY77 1395 aa11.73□□□□□ -0.53
CCDC90B-207ENST00000526631 C8orf37Q96NL8 207 aa11.73□□□□□ -0.53
CCDC90B-207ENST00000526631 CDK12Q9NYV4 1490 aaPredicted RBP11.73□□□□□ -0.53
CCDC90B-207ENST00000526631 FMN2Q9NZ56 1722 aa11.73□□□□□ -0.53
CCDC90B-207ENST00000526631 TK2O00142 265 aa11.72□□□□□ -0.53
CCDC90B-207ENST00000526631 IFFO2Q5TF58 517 aa11.72□□□□□ -0.53
CCDC90B-207ENST00000526631 KRT28Q7Z3Y7 464 aa11.72□□□□□ -0.53
CCDC90B-207ENST00000526631 QTRT2Q9H974 415 aaKnown RBP11.72□□□□□ -0.53
CCDC90B-207ENST00000526631 TRPC5Q9UL62 973 aaPredicted RBP11.72□□□□□ -0.53
CCDC90B-207ENST00000526631 TRAK1Q9UPV9 953 aa11.72□□□□□ -0.53
CCDC90B-207ENST00000526631 PCDHGA4Q9Y5G9 962 aa11.72□□□□□ -0.53
CCDC90B-207ENST00000526631 ARHGEF10O15013 1369 aa11.71□□□□□ -0.53
CCDC90B-207ENST00000526631 KIAA1210Q9ULL0 1709 aa11.71□□□□□ -0.54
CCDC90B-207ENST00000526631 LRP6O75581 1613 aa11.71□□□□□ -0.54
CCDC90B-207ENST00000526631 NUTM2FA1L443 756 aa11.7□□□□□ -0.54
CCDC90B-207ENST00000526631 ADAMTS2O95450 1211 aa11.7□□□□□ -0.54
CCDC90B-207ENST00000526631 SAFB2Q14151 953 aaKnown RBP eCLIP11.7□□□□□ -0.54
CCDC90B-207ENST00000526631 DDX17Q92841 729 aaKnown RBP11.7□□□□□ -0.54
CCDC90B-207ENST00000526631 USP21Q9UK80 565 aa11.7□□□□□ -0.54
CCDC90B-207ENST00000526631 COL22A1Q8NFW1 1626 aaPredicted RBP11.7□□□□□ -0.54
CCDC90B-207ENST00000526631 SBNO1A3KN83 1393 aa11.69□□□□□ -0.54
CCDC90B-207ENST00000526631 SPATA31A3Q5VYP0 1347 aa11.69□□□□□ -0.54
CCDC90B-207ENST00000526631 WASLO00401 505 aaPredicted RBP11.69□□□□□ -0.54
CCDC90B-207ENST00000526631 FNBP4Q8N3X1 1017 aaPredicted RBP11.69□□□□□ -0.54
CCDC90B-207ENST00000526631 ADGRB2O60241 1585 aa11.69□□□□□ -0.54
CCDC90B-207ENST00000526631 PLEKHH1Q9ULM0 1364 aa11.68□□□□□ -0.54
CCDC90B-207ENST00000526631 A0A0G2JS52 829 aa11.68□□□□□ -0.54
CCDC90B-207ENST00000526631 PSEN2P49810 448 aa11.68□□□□□ -0.54
CCDC90B-207ENST00000526631 NGDNQ8NEJ9 315 aaKnown RBP11.68□□□□□ -0.54
CCDC90B-207ENST00000526631 PXDNQ92626 1479 aa11.68□□□□□ -0.54
CCDC90B-207ENST00000526631 ADGRB1O14514 1584 aa11.67□□□□□ -0.54
CCDC90B-207ENST00000526631 LMOD2Q6P5Q4 547 aa11.67□□□□□ -0.54
CCDC90B-207ENST00000526631 MINK1Q8N4C8 1332 aaPredicted RBP11.66□□□□□ -0.54
CCDC90B-207ENST00000526631 C2orf72A6NCS6 295 aa11.66□□□□□ -0.54
CCDC90B-207ENST00000526631 SLC34A2O95436 690 aa11.66□□□□□ -0.54
CCDC90B-207ENST00000526631 ITSN1Q15811 1721 aa11.66□□□□□ -0.54
CCDC90B-207ENST00000526631 RGPD8O14715 1765 aaPredicted RBP11.65□□□□□ -0.54
CCDC90B-207ENST00000526631 SLC24A1O60721 1099 aa11.65□□□□□ -0.54
CCDC90B-207ENST00000526631 TNS3Q68CZ2 1445 aa11.65□□□□□ -0.54
CCDC90B-207ENST00000526631 MARF1Q9Y4F3 1742 aaKnown RBP11.65□□□□□ -0.54
CCDC90B-207ENST00000526631 TULP4Q9NRJ4 1543 aa11.65□□□□□ -0.55
CCDC90B-207ENST00000526631 XPCQ01831 940 aaPredicted RBP11.64□□□□□ -0.55
CCDC90B-207ENST00000526631 CCDC125Q86Z20 511 aa11.63□□□□□ -0.55
CCDC90B-207ENST00000526631 UNC5CLQ8IV45 518 aa11.63□□□□□ -0.55
CCDC90B-207ENST00000526631 SPOCK2Q92563 424 aa11.63□□□□□ -0.55
CCDC90B-207ENST00000526631 NUDT16Q96DE0 195 aaKnown RBP11.63□□□□□ -0.55
CCDC90B-207ENST00000526631 HIRIP3Q9BW71 556 aaPredicted RBP11.63□□□□□ -0.55
CCDC90B-207ENST00000526631 BRD4O60885 1362 aaPredicted RBP11.63□□□□□ -0.55
CCDC90B-207ENST00000526631 CENPJQ9HC77 1338 aaPredicted RBP11.62□□□□□ -0.55
CCDC90B-207ENST00000526631 TRIM26Q12899 539 aaPredicted RBP11.62□□□□□ -0.55
CCDC90B-207ENST00000526631 PMFBP1Q8TBY8 1022 aa11.62□□□□□ -0.55
CCDC90B-207ENST00000526631 CDK19Q9BWU1 502 aa11.62□□□□□ -0.55
CCDC90B-207ENST00000526631 ATAD2Q6PL18 1390 aa11.62□□□□□ -0.55
CCDC90B-207ENST00000526631 ARHGEF28Q8N1W1 1705 aaKnown RBP11.61□□□□□ -0.55
CCDC90B-207ENST00000526631 PTPN5P54829 565 aa11.61□□□□□ -0.55
CCDC90B-207ENST00000526631 GJD4Q96KN9 370 aaPredicted RBP11.61□□□□□ -0.55
CCDC90B-207ENST00000526631 SRPK2P78362 688 aaKnown RBP11.6□□□□□ -0.55
CCDC90B-207ENST00000526631 NEUROD1Q13562 356 aa11.6□□□□□ -0.55
CCDC90B-207ENST00000526631 IFNLR1Q8IU57 520 aaPredicted RBP11.6□□□□□ -0.55
CCDC90B-207ENST00000526631 L3MBTL2Q969R5 705 aa11.6□□□□□ -0.55
CCDC90B-207ENST00000526631 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.6□□□□□ -0.55
CCDC90B-207ENST00000526631 EVC2Q86UK5 1308 aa11.6□□□□□ -0.55
CCDC90B-207ENST00000526631 PLEKHG3A1L390 1219 aa11.59□□□□□ -0.55
CCDC90B-207ENST00000526631 FBXO22Q8NEZ5 403 aa11.59□□□□□ -0.55
CCDC90B-207ENST00000526631 UPF1Q92900 1129 aaKnown RBP eCLIP11.59□□□□□ -0.55
CCDC90B-207ENST00000526631 ATRNO75882 1429 aa11.59□□□□□ -0.55
CCDC90B-207ENST00000526631 ATP7BP35670 1465 aa11.58□□□□□ -0.56
CCDC90B-207ENST00000526631 NWD2Q9ULI1 1742 aa11.58□□□□□ -0.56
CCDC90B-207ENST00000526631 USP32Q8NFA0 1604 aa11.58□□□□□ -0.56
CCDC90B-207ENST00000526631 LCE2BO14633 110 aa11.58□□□□□ -0.56
CCDC90B-207ENST00000526631 CCDC9Q9Y3X0 531 aaKnown RBP11.58□□□□□ -0.56
CCDC90B-207ENST00000526631 ROCK2O75116 1388 aaKnown RBP11.57□□□□□ -0.56
CCDC90B-207ENST00000526631 TONSLQ96HA7 1378 aa11.57□□□□□ -0.56
CCDC90B-207ENST00000526631 VPS72Q15906 364 aa11.57□□□□□ -0.56
CCDC90B-207ENST00000526631 NLRP13Q86W25 1043 aa11.57□□□□□ -0.56
CCDC90B-207ENST00000526631 BCL9LQ86UU0 1499 aa11.57□□□□□ -0.56
CCDC90B-207ENST00000526631 SLIT2O94813 1529 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms