RNA–Protein interactions for RNA: ENST00000525148.1

NPAS4-203, Transcript of neuronal PAS domain protein 4, humanhuman

TSL 1 (best)

Gene NPAS4, Length 2,454 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-203ENST00000525148 NOB1Q9ULX3 412 aaKnown RBP22■■□□□ 1.11
NPAS4-203ENST00000525148 PTCH1Q13635 1447 aa22■■□□□ 1.11
NPAS4-203ENST00000525148 SSH2Q76I76 1423 aa22■■□□□ 1.11
NPAS4-203ENST00000525148 KCNA6P17658 529 aa21.99■■□□□ 1.11
NPAS4-203ENST00000525148 MVPQ14764 893 aaKnown RBP21.99■■□□□ 1.11
NPAS4-203ENST00000525148 FAM83GA6ND36 823 aa21.99■■□□□ 1.11
NPAS4-203ENST00000525148 NEFMP07197 916 aa21.99■■□□□ 1.11
NPAS4-203ENST00000525148 HSP90AB2PQ58FF8 381 aa21.98■■□□□ 1.11
NPAS4-203ENST00000525148 DIP2AQ14689 1571 aa21.97■■□□□ 1.11
NPAS4-203ENST00000525148 DCTN1Q14203 1278 aa21.97■■□□□ 1.11
NPAS4-203ENST00000525148 FTSJ3Q8IY81 847 aaKnown RBP21.97■■□□□ 1.11
NPAS4-203ENST00000525148 TSPYL6Q8N831 410 aa21.96■■□□□ 1.11
NPAS4-203ENST00000525148 PEAK1Q9H792 1746 aa21.96■■□□□ 1.11
NPAS4-203ENST00000525148 ATF7IPQ6VMQ6 1270 aa21.95■■□□□ 1.1
NPAS4-203ENST00000525148 RGPD8O14715 1765 aaPredicted RBP21.95■■□□□ 1.1
NPAS4-203ENST00000525148 FAM161AQ3B820 660 aa21.95■■□□□ 1.1
NPAS4-203ENST00000525148 SULT6B1Q6IMI4 303 aa21.95■■□□□ 1.1
NPAS4-203ENST00000525148 XRN1Q8IZH2 1706 aaKnown RBP21.94■■□□□ 1.1
NPAS4-203ENST00000525148 CEP170BQ9Y4F5 1589 aaPredicted RBP21.94■■□□□ 1.1
NPAS4-203ENST00000525148 USP31Q70CQ4 1352 aa21.94■■□□□ 1.1
NPAS4-203ENST00000525148 MBIPQ9NS73 344 aa21.94■■□□□ 1.1
NPAS4-203ENST00000525148 ZNF853P0CG23 659 aa21.93■■□□□ 1.1
NPAS4-203ENST00000525148 NGDNQ8NEJ9 315 aaKnown RBP21.93■■□□□ 1.1
NPAS4-203ENST00000525148 RBM33Q96EV2 1170 aaKnown RBP21.93■■□□□ 1.1
NPAS4-203ENST00000525148 ELL2O00472 640 aaPredicted RBP21.92■■□□□ 1.1
NPAS4-203ENST00000525148 TMEM57Q8N5G2 664 aa21.92■■□□□ 1.1
NPAS4-203ENST00000525148 ZBTB47Q9UFB7 747 aaPredicted RBP21.92■■□□□ 1.1
NPAS4-203ENST00000525148 RIMS1Q86UR5 1692 aaKnown RBP21.92■■□□□ 1.1
NPAS4-203ENST00000525148 VAMP4O75379 141 aa21.91■■□□□ 1.1
NPAS4-203ENST00000525148 ITPRIPQ8IWB1 547 aa21.91■■□□□ 1.1
NPAS4-203ENST00000525148 NALCNQ8IZF0 1738 aa21.91■■□□□ 1.1
NPAS4-203ENST00000525148 MAP3K19Q56UN5 1328 aa21.91■■□□□ 1.1
NPAS4-203ENST00000525148 IFT57Q9NWB7 429 aa21.9■■□□□ 1.1
NPAS4-203ENST00000525148 DLG5Q8TDM6 1919 aa21.9■■□□□ 1.1
NPAS4-203ENST00000525148 AAMPQ13685 434 aa21.89■■□□□ 1.1
NPAS4-203ENST00000525148 MYT1Q01538 1121 aa21.89■■□□□ 1.09
NPAS4-203ENST00000525148 GNAI1P63096 354 aa21.88■■□□□ 1.09
NPAS4-203ENST00000525148 ALDH1L2Q3SY69 923 aa21.88■■□□□ 1.09
NPAS4-203ENST00000525148 C8orf58Q8NAV2 365 aa21.88■■□□□ 1.09
NPAS4-203ENST00000525148 PDZRN3Q9UPQ7 1066 aa21.88■■□□□ 1.09
NPAS4-203ENST00000525148 NUTM2GQ5VZR2 741 aa21.88■■□□□ 1.09
NPAS4-203ENST00000525148 TTC21AQ8NDW8 1320 aa21.87■■□□□ 1.09
NPAS4-203ENST00000525148 MRPL50Q8N5N7 158 aaKnown RBP21.86■■□□□ 1.09
NPAS4-203ENST00000525148 CFAP44Q96MT7 982 aa21.86■■□□□ 1.09
NPAS4-203ENST00000525148 RWDD1Q9H446 243 aaPredicted RBP21.86■■□□□ 1.09
NPAS4-203ENST00000525148 KIF16BQ96L93 1317 aa21.86■■□□□ 1.09
NPAS4-203ENST00000525148 CALD1Q05682 793 aaKnown RBP21.85■■□□□ 1.09
NPAS4-203ENST00000525148 DDX19BQ9UMR2 479 aa21.85■■□□□ 1.09
NPAS4-203ENST00000525148 PIK3C2AO00443 1686 aa21.85■■□□□ 1.09
NPAS4-203ENST00000525148 MCM10Q7L590 875 aa21.84■■□□□ 1.09
NPAS4-203ENST00000525148 RGPD1P0DJD0 1748 aa21.83■■□□□ 1.09
NPAS4-203ENST00000525148 LMOD3Q0VAK6 560 aa21.83■■□□□ 1.09
NPAS4-203ENST00000525148 KRT24Q2M2I5 525 aa21.83■■□□□ 1.09
NPAS4-203ENST00000525148 IPO8O15397 1037 aaKnown RBP21.83■■□□□ 1.08
NPAS4-203ENST00000525148 TWISTNBQ3B726 338 aaPredicted RBP21.83■■□□□ 1.08
NPAS4-203ENST00000525148 ZBTB40Q9NUA8 1239 aa21.83■■□□□ 1.08
NPAS4-203ENST00000525148 SEC24BO95487 1268 aa21.82■■□□□ 1.08
NPAS4-203ENST00000525148 ANKLE2Q86XL3 938 aa21.82■■□□□ 1.08
NPAS4-203ENST00000525148 FOXO3O43524 673 aa21.82■■□□□ 1.08
NPAS4-203ENST00000525148 NLRP6P59044 892 aa21.82■■□□□ 1.08
NPAS4-203ENST00000525148 PIK3R4Q99570 1358 aa21.82■■□□□ 1.08
NPAS4-203ENST00000525148 BRPF1P55201 1214 aaPredicted RBP21.81■■□□□ 1.08
NPAS4-203ENST00000525148 ANKARQ7Z5J8 1434 aa21.81■■□□□ 1.08
NPAS4-203ENST00000525148 FMN2Q9NZ56 1722 aa21.8■■□□□ 1.08
NPAS4-203ENST00000525148 SBNO1A3KN83 1393 aa21.8■■□□□ 1.08
NPAS4-203ENST00000525148 NBR1Q14596 966 aa21.79■■□□□ 1.08
NPAS4-203ENST00000525148 ZNF428Q96B54 188 aa21.79■■□□□ 1.08
NPAS4-203ENST00000525148 FLT4P35916 1363 aa21.79■■□□□ 1.08
NPAS4-203ENST00000525148 SLC4A3P48751 1232 aa21.79■■□□□ 1.08
NPAS4-203ENST00000525148 AMPHP49418 695 aa21.79■■□□□ 1.08
NPAS4-203ENST00000525148 EYA1Q99502 592 aa21.79■■□□□ 1.08
NPAS4-203ENST00000525148 HDAC1Q13547 482 aaPredicted RBP21.78■■□□□ 1.08
NPAS4-203ENST00000525148 USP19O94966 1318 aa21.77■■□□□ 1.08
NPAS4-203ENST00000525148 MTHFSDQ2M296 383 aaKnown RBP21.77■■□□□ 1.08
NPAS4-203ENST00000525148 ARHGEF10O15013 1369 aa21.76■■□□□ 1.07
NPAS4-203ENST00000525148 MARF1Q9Y4F3 1742 aaKnown RBP21.76■■□□□ 1.07
NPAS4-203ENST00000525148 ABTB2Q8N961 1025 aa21.75■■□□□ 1.07
NPAS4-203ENST00000525148 MIS18AQ9NYP9 233 aa21.75■■□□□ 1.07
NPAS4-203ENST00000525148 ADAMTSL3P82987 1691 aa21.75■■□□□ 1.07
NPAS4-203ENST00000525148 CHL1O00533 1208 aa21.75■■□□□ 1.07
NPAS4-203ENST00000525148 C1orf115Q9H7X2 142 aa21.75■■□□□ 1.07
NPAS4-203ENST00000525148 CHD2O14647 1828 aaKnown RBP21.75■■□□□ 1.07
NPAS4-203ENST00000525148 ZBTB7BO15156 539 aaPredicted RBP21.74■■□□□ 1.07
NPAS4-203ENST00000525148 PHF8Q9UPP1 1060 aa21.74■■□□□ 1.07
NPAS4-203ENST00000525148 ARHGAP45Q92619 1136 aa21.73■■□□□ 1.07
NPAS4-203ENST00000525148 CRB1P82279 1406 aa21.73■■□□□ 1.07
NPAS4-203ENST00000525148 IGSF1Q8N6C5 1336 aa21.73■■□□□ 1.07
NPAS4-203ENST00000525148 HOXC9P31274 260 aa21.73■■□□□ 1.07
NPAS4-203ENST00000525148 C14orf37Q86TY3 774 aa21.73■■□□□ 1.07
NPAS4-203ENST00000525148 ZNF142P52746 1687 aaPredicted RBP21.73■■□□□ 1.07
NPAS4-203ENST00000525148 ABCC4O15439 1325 aa21.72■■□□□ 1.07
NPAS4-203ENST00000525148 KDRP35968 1356 aa21.72■■□□□ 1.07
NPAS4-203ENST00000525148 SMC5Q8IY18 1101 aa21.72■■□□□ 1.07
NPAS4-203ENST00000525148 LTV1Q96GA3 475 aaPredicted RBP21.71■■□□□ 1.07
NPAS4-203ENST00000525148 DDRGK1Q96HY6 314 aa21.71■■□□□ 1.07
NPAS4-203ENST00000525148 VIRMAQ69YN4 1812 aaKnown RBP21.69■■□□□ 1.06
NPAS4-203ENST00000525148 ESCO1Q5FWF5 840 aa21.68■■□□□ 1.06
NPAS4-203ENST00000525148 NWD1Q149M9 1564 aa21.68■■□□□ 1.06
NPAS4-203ENST00000525148 SIRT2Q8IXJ6 389 aa21.67■■□□□ 1.06
NPAS4-203ENST00000525148 USHBP1Q8N6Y0 703 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms