RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 SMC4Q9NTJ3 1288 aa17.66■□□□□ 0.42
LDLRAD3-202ENST00000524419 LMTK3Q96Q04 1460 aa17.66■□□□□ 0.42
LDLRAD3-202ENST00000524419 CALD1Q05682 793 aaKnown RBP17.66■□□□□ 0.42
LDLRAD3-202ENST00000524419 ZNF142P52746 1687 aaPredicted RBP17.66■□□□□ 0.42
LDLRAD3-202ENST00000524419 RLBP1P12271 317 aa17.65■□□□□ 0.42
LDLRAD3-202ENST00000524419 PIK3R4Q99570 1358 aa17.64■□□□□ 0.41
LDLRAD3-202ENST00000524419 FMN2Q9NZ56 1722 aa17.64■□□□□ 0.41
LDLRAD3-202ENST00000524419 NPM2Q86SE8 214 aaKnown RBP17.64■□□□□ 0.41
LDLRAD3-202ENST00000524419 FTSJ3Q8IY81 847 aaKnown RBP17.64■□□□□ 0.41
LDLRAD3-202ENST00000524419 PHACTR3Q96KR7 559 aa17.64■□□□□ 0.41
LDLRAD3-202ENST00000524419 TNNQ9UQP3 1299 aa17.64■□□□□ 0.41
LDLRAD3-202ENST00000524419 SSH2Q76I76 1423 aa17.63■□□□□ 0.41
LDLRAD3-202ENST00000524419 PEAK1Q9H792 1746 aa17.63■□□□□ 0.41
LDLRAD3-202ENST00000524419 LMOD3Q0VAK6 560 aa17.63■□□□□ 0.41
LDLRAD3-202ENST00000524419 TTC21AQ8NDW8 1320 aa17.63■□□□□ 0.41
LDLRAD3-202ENST00000524419 IGHDP01880 384 aa17.62■□□□□ 0.41
LDLRAD3-202ENST00000524419 DZIP1LQ8IYY4 767 aaKnown RBP17.62■□□□□ 0.41
LDLRAD3-202ENST00000524419 PMFBP1Q8TBY8 1022 aa17.62■□□□□ 0.41
LDLRAD3-202ENST00000524419 USP31Q70CQ4 1352 aa17.62■□□□□ 0.41
LDLRAD3-202ENST00000524419 MVPQ14764 893 aaKnown RBP17.62■□□□□ 0.41
LDLRAD3-202ENST00000524419 SSH1Q8WYL5 1049 aa17.62■□□□□ 0.41
LDLRAD3-202ENST00000524419 ANKARQ7Z5J8 1434 aa17.62■□□□□ 0.41
LDLRAD3-202ENST00000524419 VIRMAQ69YN4 1812 aaKnown RBP17.62■□□□□ 0.41
LDLRAD3-202ENST00000524419 KIF16BQ96L93 1317 aa17.61■□□□□ 0.41
LDLRAD3-202ENST00000524419 RGPD1P0DJD0 1748 aa17.6■□□□□ 0.41
LDLRAD3-202ENST00000524419 RGS3P49796 1198 aa17.6■□□□□ 0.41
LDLRAD3-202ENST00000524419 DDRGK1Q96HY6 314 aa17.6■□□□□ 0.41
LDLRAD3-202ENST00000524419 CHD2O14647 1828 aaKnown RBP17.59■□□□□ 0.41
LDLRAD3-202ENST00000524419 PIK3C2AO00443 1686 aa17.59■□□□□ 0.41
LDLRAD3-202ENST00000524419 GNAI1P63096 354 aa17.59■□□□□ 0.41
LDLRAD3-202ENST00000524419 EIF4A2Q14240 407 aaKnown RBP17.59■□□□□ 0.41
LDLRAD3-202ENST00000524419 FAM161AQ3B820 660 aa17.59■□□□□ 0.41
LDLRAD3-202ENST00000524419 ALDH1L2Q3SY69 923 aa17.59■□□□□ 0.41
LDLRAD3-202ENST00000524419 IFT57Q9NWB7 429 aa17.59■□□□□ 0.41
LDLRAD3-202ENST00000524419 LAS1LQ9Y4W2 734 aaKnown RBP17.59■□□□□ 0.41
LDLRAD3-202ENST00000524419 NBR1Q14596 966 aa17.59■□□□□ 0.41
LDLRAD3-202ENST00000524419 NGDNQ8NEJ9 315 aaKnown RBP17.59■□□□□ 0.41
LDLRAD3-202ENST00000524419 ZNF428Q96B54 188 aa17.59■□□□□ 0.41
LDLRAD3-202ENST00000524419 ATF7IPQ6VMQ6 1270 aa17.58■□□□□ 0.4
LDLRAD3-202ENST00000524419 IPO8O15397 1037 aaKnown RBP17.57■□□□□ 0.4
LDLRAD3-202ENST00000524419 TRIM27P14373 513 aa17.57■□□□□ 0.4
LDLRAD3-202ENST00000524419 KCNA6P17658 529 aa17.57■□□□□ 0.4
LDLRAD3-202ENST00000524419 THUMPD2Q9BTF0 503 aaKnown RBP17.57■□□□□ 0.4
LDLRAD3-202ENST00000524419 NOB1Q9ULX3 412 aaKnown RBP17.57■□□□□ 0.4
LDLRAD3-202ENST00000524419 PCDHB15Q9Y5E8 787 aa17.57■□□□□ 0.4
LDLRAD3-202ENST00000524419 RWDD1Q9H446 243 aaPredicted RBP17.56■□□□□ 0.4
LDLRAD3-202ENST00000524419 USP54Q70EL1 1684 aa17.56■□□□□ 0.4
LDLRAD3-202ENST00000524419 DEKP35659 375 aaKnown RBP17.55■□□□□ 0.4
LDLRAD3-202ENST00000524419 HSPA2P54652 639 aa17.55■□□□□ 0.4
LDLRAD3-202ENST00000524419 ANKLE2Q86XL3 938 aa17.55■□□□□ 0.4
LDLRAD3-202ENST00000524419 DDX19BQ9UMR2 479 aa17.55■□□□□ 0.4
LDLRAD3-202ENST00000524419 ZNF853P0CG23 659 aa17.54■□□□□ 0.4
LDLRAD3-202ENST00000524419 C8orf34Q49A92 452 aa17.54■□□□□ 0.4
LDLRAD3-202ENST00000524419 RTL5Q5HYW3 569 aaPredicted RBP17.54■□□□□ 0.4
LDLRAD3-202ENST00000524419 SULT6B1Q6IMI4 303 aa17.54■□□□□ 0.4
LDLRAD3-202ENST00000524419 ITPRIPQ8IWB1 547 aa17.54■□□□□ 0.4
LDLRAD3-202ENST00000524419 SETD1BQ9UPS6 1966 aaKnown RBP17.54■□□□□ 0.4
LDLRAD3-202ENST00000524419 SBNO1A3KN83 1393 aa17.53■□□□□ 0.4
LDLRAD3-202ENST00000524419 ARHGEF10O15013 1369 aa17.53■□□□□ 0.4
LDLRAD3-202ENST00000524419 MARF1Q9Y4F3 1742 aaKnown RBP17.53■□□□□ 0.4
LDLRAD3-202ENST00000524419 FLT4P35916 1363 aa17.53■□□□□ 0.4
LDLRAD3-202ENST00000524419 AEBP1Q8IUX7 1158 aa17.53■□□□□ 0.4
LDLRAD3-202ENST00000524419 MBIPQ9NS73 344 aa17.53■□□□□ 0.4
LDLRAD3-202ENST00000524419 SOX12O15370 315 aa17.52■□□□□ 0.4
LDLRAD3-202ENST00000524419 BRPF1P55201 1214 aaPredicted RBP17.52■□□□□ 0.4
LDLRAD3-202ENST00000524419 HSP90AB2PQ58FF8 381 aa17.52■□□□□ 0.4
LDLRAD3-202ENST00000524419 CFAP44Q96MT7 982 aa17.52■□□□□ 0.4
LDLRAD3-202ENST00000524419 MAP3K19Q56UN5 1328 aa17.52■□□□□ 0.39
LDLRAD3-202ENST00000524419 VAMP4O75379 141 aa17.5■□□□□ 0.39
LDLRAD3-202ENST00000524419 TMEM57Q8N5G2 664 aa17.5■□□□□ 0.39
LDLRAD3-202ENST00000524419 BCL11AQ9H165 835 aa17.5■□□□□ 0.39
LDLRAD3-202ENST00000524419 FAM83GA6ND36 823 aa17.49■□□□□ 0.39
LDLRAD3-202ENST00000524419 USP35Q9P2H5 1018 aa17.49■□□□□ 0.39
LDLRAD3-202ENST00000524419 MRPL50Q8N5N7 158 aaKnown RBP17.48■□□□□ 0.39
LDLRAD3-202ENST00000524419 AMPHP49418 695 aa17.48■□□□□ 0.39
LDLRAD3-202ENST00000524419 TWISTNBQ3B726 338 aaPredicted RBP17.48■□□□□ 0.39
LDLRAD3-202ENST00000524419 TSPYL6Q8N831 410 aa17.48■□□□□ 0.39
LDLRAD3-202ENST00000524419 PDZRN3Q9UPQ7 1066 aa17.48■□□□□ 0.39
LDLRAD3-202ENST00000524419 DCTN1Q14203 1278 aa17.47■□□□□ 0.39
LDLRAD3-202ENST00000524419 ARHGAP45Q92619 1136 aa17.47■□□□□ 0.39
LDLRAD3-202ENST00000524419 NLRP6P59044 892 aa17.46■□□□□ 0.39
LDLRAD3-202ENST00000524419 HDAC1Q13547 482 aaPredicted RBP17.46■□□□□ 0.39
LDLRAD3-202ENST00000524419 KIF24Q5T7B8 1368 aa17.46■□□□□ 0.39
LDLRAD3-202ENST00000524419 ADGRL3Q9HAR2 1447 aa17.46■□□□□ 0.38
LDLRAD3-202ENST00000524419 CHMP4BQ9H444 224 aaKnown RBP17.45■□□□□ 0.38
LDLRAD3-202ENST00000524419 ZBTB40Q9NUA8 1239 aa17.45■□□□□ 0.38
LDLRAD3-202ENST00000524419 NPHP4O75161 1426 aaPredicted RBP17.44■□□□□ 0.38
LDLRAD3-202ENST00000524419 KDRP35968 1356 aa17.44■□□□□ 0.38
LDLRAD3-202ENST00000524419 C8orf58Q8NAV2 365 aa17.44■□□□□ 0.38
LDLRAD3-202ENST00000524419 ELL2O00472 640 aaPredicted RBP17.44■□□□□ 0.38
LDLRAD3-202ENST00000524419 CERKQ8TCT0 537 aa17.44■□□□□ 0.38
LDLRAD3-202ENST00000524419 PHF8Q9UPP1 1060 aa17.44■□□□□ 0.38
LDLRAD3-202ENST00000524419 LTN1O94822 1766 aa17.44■□□□□ 0.38
LDLRAD3-202ENST00000524419 IGSF1Q8N6C5 1336 aa17.43■□□□□ 0.38
LDLRAD3-202ENST00000524419 HAP1P54257 671 aaPredicted RBP17.43■□□□□ 0.38
LDLRAD3-202ENST00000524419 ABTB2Q8N961 1025 aa17.42■□□□□ 0.38
LDLRAD3-202ENST00000524419 MCM10Q7L590 875 aa17.42■□□□□ 0.38
LDLRAD3-202ENST00000524419 ABCC4O15439 1325 aa17.41■□□□□ 0.38
LDLRAD3-202ENST00000524419 CHL1O00533 1208 aa17.41■□□□□ 0.38
LDLRAD3-202ENST00000524419 API5Q9BZZ5 524 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms