RNA–Protein interactions for RNA: ENST00000523338.5

TNIP1-218, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNIP1, Length 2,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-218ENST00000523338 IL16Q14005 1332 aa15.9■□□□□ 0.14
TNIP1-218ENST00000523338 CT47B1P0C2W7 299 aaPredicted RBP15.89■□□□□ 0.13
TNIP1-218ENST00000523338 HDGFP51858 240 aaKnown RBP15.89■□□□□ 0.13
TNIP1-218ENST00000523338 SPATA31D1Q6ZQQ2 1576 aa15.89■□□□□ 0.13
TNIP1-218ENST00000523338 TWISTNBQ3B726 338 aaPredicted RBP15.88■□□□□ 0.13
TNIP1-218ENST00000523338 UPF2Q9HAU5 1272 aaKnown RBP15.88■□□□□ 0.13
TNIP1-218ENST00000523338 MED14O60244 1454 aa15.88■□□□□ 0.13
TNIP1-218ENST00000523338 RBM33Q96EV2 1170 aaKnown RBP15.88■□□□□ 0.13
TNIP1-218ENST00000523338 KIF16BQ96L93 1317 aa15.88■□□□□ 0.13
TNIP1-218ENST00000523338 CPSF1Q10570 1443 aaKnown RBP15.88■□□□□ 0.13
TNIP1-218ENST00000523338 FAM135BQ49AJ0 1406 aa15.88■□□□□ 0.13
TNIP1-218ENST00000523338 EDC4Q6P2E9 1401 aaKnown RBP15.88■□□□□ 0.13
TNIP1-218ENST00000523338 EIF4A2Q14240 407 aaKnown RBP15.87■□□□□ 0.13
TNIP1-218ENST00000523338 KIF20BQ96Q89 1820 aa15.87■□□□□ 0.13
TNIP1-218ENST00000523338 AGLP35573 1532 aa15.87■□□□□ 0.13
TNIP1-218ENST00000523338 ATP7BP35670 1465 aa15.87■□□□□ 0.13
TNIP1-218ENST00000523338 NCBP3Q53F19 620 aaKnown RBP15.86■□□□□ 0.13
TNIP1-218ENST00000523338 ANKRD45Q5TZF3 282 aa15.86■□□□□ 0.13
TNIP1-218ENST00000523338 TMEM2Q9UHN6 1383 aa15.86■□□□□ 0.13
TNIP1-218ENST00000523338 GNAI1P63096 354 aa15.86■□□□□ 0.13
TNIP1-218ENST00000523338 AAMPQ13685 434 aa15.86■□□□□ 0.13
TNIP1-218ENST00000523338 MRPL50Q8N5N7 158 aaKnown RBP15.86■□□□□ 0.13
TNIP1-218ENST00000523338 NRXN3Q9Y4C0 1643 aa15.85■□□□□ 0.13
TNIP1-218ENST00000523338 FOXO3O43524 673 aa15.85■□□□□ 0.13
TNIP1-218ENST00000523338 HDAC1Q13547 482 aaPredicted RBP15.85■□□□□ 0.13
TNIP1-218ENST00000523338 ANKRD26Q9UPS8 1709 aa15.85■□□□□ 0.13
TNIP1-218ENST00000523338 TTC21BQ7Z4L5 1316 aa15.84■□□□□ 0.13
TNIP1-218ENST00000523338 AMOTL2Q9Y2J4 779 aa15.84■□□□□ 0.13
TNIP1-218ENST00000523338 APBB1O00213 710 aa15.84■□□□□ 0.13
TNIP1-218ENST00000523338 ALDH1L2Q3SY69 923 aa15.84■□□□□ 0.13
TNIP1-218ENST00000523338 USP35Q9P2H5 1018 aa15.84■□□□□ 0.13
TNIP1-218ENST00000523338 ZBTB7BO15156 539 aaPredicted RBP15.83■□□□□ 0.12
TNIP1-218ENST00000523338 TBC1D32Q96NH3 1257 aa15.83■□□□□ 0.12
TNIP1-218ENST00000523338 ZNF692Q9BU19 519 aaPredicted RBP15.83■□□□□ 0.12
TNIP1-218ENST00000523338 RTN4Q9NQC3 1192 aaKnown RBP15.83■□□□□ 0.12
TNIP1-218ENST00000523338 IFT57Q9NWB7 429 aa15.83■□□□□ 0.12
TNIP1-218ENST00000523338 NGDNQ8NEJ9 315 aaKnown RBP15.82■□□□□ 0.12
TNIP1-218ENST00000523338 CFAP44Q96MT7 982 aa15.82■□□□□ 0.12
TNIP1-218ENST00000523338 DLC1Q96QB1 1528 aa15.82■□□□□ 0.12
TNIP1-218ENST00000523338 SETD1AO15047 1707 aaKnown RBP15.82■□□□□ 0.12
TNIP1-218ENST00000523338 TBC1D2Q9BYX2 928 aa15.82■□□□□ 0.12
TNIP1-218ENST00000523338 BECN1Q14457 450 aa15.81■□□□□ 0.12
TNIP1-218ENST00000523338 SMC5Q8IY18 1101 aa15.81■□□□□ 0.12
TNIP1-218ENST00000523338 C14orf37Q86TY3 774 aa15.81■□□□□ 0.12
TNIP1-218ENST00000523338 IL27Q8NEV9 243 aa15.81■□□□□ 0.12
TNIP1-218ENST00000523338 EID1Q9Y6B2 187 aa15.81■□□□□ 0.12
TNIP1-218ENST00000523338 CALD1Q05682 793 aaKnown RBP15.81■□□□□ 0.12
TNIP1-218ENST00000523338 LTV1Q96GA3 475 aaPredicted RBP15.81■□□□□ 0.12
TNIP1-218ENST00000523338 C22orf23Q9BZE7 217 aa15.81■□□□□ 0.12
TNIP1-218ENST00000523338 ZNF853P0CG23 659 aa15.8■□□□□ 0.12
TNIP1-218ENST00000523338 CHD1LQ86WJ1 897 aa15.8■□□□□ 0.12
TNIP1-218ENST00000523338 SIRT2Q8IXJ6 389 aa15.8■□□□□ 0.12
TNIP1-218ENST00000523338 NUCB1Q02818 461 aa15.79■□□□□ 0.12
TNIP1-218ENST00000523338 NECTIN2Q92692 538 aa15.79■□□□□ 0.12
TNIP1-218ENST00000523338 ARXQ96QS3 562 aa15.79■□□□□ 0.12
TNIP1-218ENST00000523338 ADAMTS13Q76LX8 1427 aa15.79■□□□□ 0.12
TNIP1-218ENST00000523338 GSE1Q14687 1217 aa15.79■□□□□ 0.12
TNIP1-218ENST00000523338 REREQ9P2R6 1566 aa15.78■□□□□ 0.12
TNIP1-218ENST00000523338 ZBTB7CA1YPR0 619 aa15.78■□□□□ 0.12
TNIP1-218ENST00000523338 AMPHP49418 695 aa15.77■□□□□ 0.11
TNIP1-218ENST00000523338 LMOD3Q0VAK6 560 aa15.77■□□□□ 0.11
TNIP1-218ENST00000523338 AATKQ6ZMQ8 1374 aa15.77■□□□□ 0.11
TNIP1-218ENST00000523338 PTPRUQ92729 1446 aa15.77■□□□□ 0.11
TNIP1-218ENST00000523338 KIF13AQ9H1H9 1805 aa15.77■□□□□ 0.11
TNIP1-218ENST00000523338 CDK12Q9NYV4 1490 aaPredicted RBP15.77■□□□□ 0.11
TNIP1-218ENST00000523338 TRHP20396 242 aaPredicted RBP15.76■□□□□ 0.11
TNIP1-218ENST00000523338 MAP3K19Q56UN5 1328 aa15.76■□□□□ 0.11
TNIP1-218ENST00000523338 CDC42BPGQ6DT37 1551 aa15.76■□□□□ 0.11
TNIP1-218ENST00000523338 NLRP6P59044 892 aa15.75■□□□□ 0.11
TNIP1-218ENST00000523338 SLC4A10Q6U841 1118 aa15.75■□□□□ 0.11
TNIP1-218ENST00000523338 C16orf71Q8IYS4 520 aaPredicted RBP15.75■□□□□ 0.11
TNIP1-218ENST00000523338 MTHFSDQ2M296 383 aaKnown RBP15.74■□□□□ 0.11
TNIP1-218ENST00000523338 SLC4A2P04920 1241 aa15.74■□□□□ 0.11
TNIP1-218ENST00000523338 FOXD4L1Q9NU39 408 aa15.74■□□□□ 0.11
TNIP1-218ENST00000523338 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.74■□□□□ 0.11
TNIP1-218ENST00000523338 F6X3S4 739 aa15.74■□□□□ 0.11
TNIP1-218ENST00000523338 SIRT1Q96EB6 747 aa15.74■□□□□ 0.11
TNIP1-218ENST00000523338 PODXL2Q9NZ53 605 aa15.74■□□□□ 0.11
TNIP1-218ENST00000523338 BRPF3Q9ULD4 1205 aa15.74■□□□□ 0.11
TNIP1-218ENST00000523338 PLEKHG3A1L390 1219 aa15.73■□□□□ 0.11
TNIP1-218ENST00000523338 KCNA6P17658 529 aa15.73■□□□□ 0.11
TNIP1-218ENST00000523338 USHBP1Q8N6Y0 703 aa15.73■□□□□ 0.11
TNIP1-218ENST00000523338 DLG5Q8TDM6 1919 aa15.72■□□□□ 0.11
TNIP1-218ENST00000523338 SMARCA5O60264 1052 aaPredicted RBP15.72■□□□□ 0.11
TNIP1-218ENST00000523338 USP6P35125 1406 aa15.72■□□□□ 0.11
TNIP1-218ENST00000523338 VIRMAQ69YN4 1812 aaKnown RBP15.72■□□□□ 0.11
TNIP1-218ENST00000523338 ABCC4O15439 1325 aa15.72■□□□□ 0.11
TNIP1-218ENST00000523338 RTF1Q92541 710 aaKnown RBP15.72■□□□□ 0.11
TNIP1-218ENST00000523338 ZNF428Q96B54 188 aa15.72■□□□□ 0.11
TNIP1-218ENST00000523338 TECPR2O15040 1411 aa15.72■□□□□ 0.11
TNIP1-218ENST00000523338 G2E3Q7L622 706 aa15.71■□□□□ 0.11
TNIP1-218ENST00000523338 OTUD7AQ8TE49 926 aaPredicted RBP15.71■□□□□ 0.11
TNIP1-218ENST00000523338 ARHGAP45Q92619 1136 aa15.71■□□□□ 0.11
TNIP1-218ENST00000523338 EYA1Q99502 592 aa15.71■□□□□ 0.11
TNIP1-218ENST00000523338 API5Q9BZZ5 524 aaKnown RBP15.71■□□□□ 0.11
TNIP1-218ENST00000523338 UBR1Q8IWV7 1749 aa15.71■□□□□ 0.11
TNIP1-218ENST00000523338 TSPYL4Q9UJ04 414 aa15.71■□□□□ 0.11
TNIP1-218ENST00000523338 CHL1O00533 1208 aa15.7■□□□□ 0.1
TNIP1-218ENST00000523338 PLEKHG1Q9ULL1 1385 aa15.7■□□□□ 0.1
TNIP1-218ENST00000523338 BRPF1P55201 1214 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms