RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 STAC3Q96MF2 364 aa10.37□□□□□ -0.75
VPS13B-211ENST00000522802 EHBP1L1Q8N3D4 1523 aa10.37□□□□□ -0.75
VPS13B-211ENST00000522802 CAMSAP2Q08AD1 1489 aa10.36□□□□□ -0.75
VPS13B-211ENST00000522802 WASHC2CQ9Y4E1 1318 aa10.36□□□□□ -0.75
VPS13B-211ENST00000522802 PDE4DQ08499 809 aa10.36□□□□□ -0.75
VPS13B-211ENST00000522802 LAPTM4BQ86VI4 370 aa10.36□□□□□ -0.75
VPS13B-211ENST00000522802 NBPF3Q9H094 633 aa10.36□□□□□ -0.75
VPS13B-211ENST00000522802 FAM135BQ49AJ0 1406 aa10.35□□□□□ -0.75
VPS13B-211ENST00000522802 SEPT9Q9UHD8 586 aaPredicted RBP10.35□□□□□ -0.75
VPS13B-211ENST00000522802 PHLPP1O60346 1717 aa10.35□□□□□ -0.75
VPS13B-211ENST00000522802 ARHGAP23Q9P227 1491 aa10.35□□□□□ -0.75
VPS13B-211ENST00000522802 SLIT1O75093 1534 aa10.34□□□□□ -0.75
VPS13B-211ENST00000522802 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.34□□□□□ -0.75
VPS13B-211ENST00000522802 RCCD1A6NED2 376 aa10.34□□□□□ -0.75
VPS13B-211ENST00000522802 FAM98CQ17RN3 349 aaKnown RBP10.34□□□□□ -0.75
VPS13B-211ENST00000522802 TMUB1Q9BVT8 246 aa10.34□□□□□ -0.75
VPS13B-211ENST00000522802 MTUS2Q5JR59 1369 aa10.34□□□□□ -0.75
VPS13B-211ENST00000522802 CFAP65Q6ZU64 1925 aaKnown RBP10.33□□□□□ -0.76
VPS13B-211ENST00000522802 PTPN5P54829 565 aa10.33□□□□□ -0.76
VPS13B-211ENST00000522802 MRPL50Q8N5N7 158 aaKnown RBP10.33□□□□□ -0.76
VPS13B-211ENST00000522802 PIK3C2BO00750 1634 aa10.33□□□□□ -0.76
VPS13B-211ENST00000522802 LRP6O75581 1613 aa10.33□□□□□ -0.76
VPS13B-211ENST00000522802 EIF2AK4Q9P2K8 1649 aaKnown RBP10.33□□□□□ -0.76
VPS13B-211ENST00000522802 DNAJB2P25686 324 aa10.32□□□□□ -0.76
VPS13B-211ENST00000522802 COL16A1Q07092 1604 aaPredicted RBP10.32□□□□□ -0.76
VPS13B-211ENST00000522802 ARHGEF5Q12774 1597 aa10.31□□□□□ -0.76
VPS13B-211ENST00000522802 TMEM94Q12767 1356 aa10.31□□□□□ -0.76
VPS13B-211ENST00000522802 BRPF1P55201 1214 aaPredicted RBP10.31□□□□□ -0.76
VPS13B-211ENST00000522802 NLRP7Q8WX94 980 aa10.31□□□□□ -0.76
VPS13B-211ENST00000522802 REPIN1Q9BWE0 567 aaKnown RBP10.31□□□□□ -0.76
VPS13B-211ENST00000522802 TMEM134Q9H6X4 195 aa10.31□□□□□ -0.76
VPS13B-211ENST00000522802 NWD1Q149M9 1564 aa10.31□□□□□ -0.76
VPS13B-211ENST00000522802 LRRC9Q6ZRR7 1453 aa10.3□□□□□ -0.76
VPS13B-211ENST00000522802 LTKP29376 864 aa10.3□□□□□ -0.76
VPS13B-211ENST00000522802 MDM2Q00987 491 aaPredicted RBP10.3□□□□□ -0.76
VPS13B-211ENST00000522802 PARP9Q8IXQ6 854 aa10.3□□□□□ -0.76
VPS13B-211ENST00000522802 CEP162Q5TB80 1403 aa10.3□□□□□ -0.76
VPS13B-211ENST00000522802 CLCN1P35523 988 aa10.29□□□□□ -0.76
VPS13B-211ENST00000522802 ZFRQ96KR1 1074 aaKnown RBP10.29□□□□□ -0.76
VPS13B-211ENST00000522802 MAST1Q9Y2H9 1570 aa10.29□□□□□ -0.76
VPS13B-211ENST00000522802 GPCPD1Q9NPB8 672 aa10.28□□□□□ -0.76
VPS13B-211ENST00000522802 DAXXQ9UER7 740 aaPredicted RBP10.28□□□□□ -0.76
VPS13B-211ENST00000522802 PRDM15P57071 1507 aaPredicted RBP10.28□□□□□ -0.76
VPS13B-211ENST00000522802 TTLL12Q14166 644 aaPredicted RBP10.27□□□□□ -0.77
VPS13B-211ENST00000522802 NKTRP30414 1462 aaKnown RBP10.27□□□□□ -0.77
VPS13B-211ENST00000522802 TET3O43151 1660 aa10.26□□□□□ -0.77
VPS13B-211ENST00000522802 KDM5AP29375 1690 aaKnown RBP10.26□□□□□ -0.77
VPS13B-211ENST00000522802 SHPRHQ149N8 1683 aa10.26□□□□□ -0.77
VPS13B-211ENST00000522802 NEUROD2Q15784 382 aa10.26□□□□□ -0.77
VPS13B-211ENST00000522802 GIGYF2Q6Y7W6 1299 aaKnown RBP10.26□□□□□ -0.77
VPS13B-211ENST00000522802 GPBP1L1Q9HC44 474 aaPredicted RBP10.26□□□□□ -0.77
VPS13B-211ENST00000522802 JCADQ9P266 1359 aa10.26□□□□□ -0.77
VPS13B-211ENST00000522802 EFCAB6Q5THR3 1501 aa10.25□□□□□ -0.77
VPS13B-211ENST00000522802 HDGFP51858 240 aaKnown RBP10.25□□□□□ -0.77
VPS13B-211ENST00000522802 SWT1Q5T5J6 900 aaKnown RBP10.25□□□□□ -0.77
VPS13B-211ENST00000522802 THSD4Q6ZMP0 1018 aa10.25□□□□□ -0.77
VPS13B-211ENST00000522802 SAMD7Q7Z3H4 446 aa10.25□□□□□ -0.77
VPS13B-211ENST00000522802 TXNDC2Q86VQ3 553 aa10.25□□□□□ -0.77
VPS13B-211ENST00000522802 TRIM52Q96A61 297 aa10.25□□□□□ -0.77
VPS13B-211ENST00000522802 KDM4CQ9H3R0 1056 aa10.24□□□□□ -0.77
VPS13B-211ENST00000522802 FAM217BQ9NTX9 383 aaPredicted RBP10.24□□□□□ -0.77
VPS13B-211ENST00000522802 TMEM2Q9UHN6 1383 aa10.24□□□□□ -0.77
VPS13B-211ENST00000522802 SSTR3P32745 418 aaPredicted RBP10.23□□□□□ -0.77
VPS13B-211ENST00000522802 IFFO2Q5TF58 517 aa10.23□□□□□ -0.77
VPS13B-211ENST00000522802 GOLGA8CPA6NN73 597 aa10.22□□□□□ -0.77
VPS13B-211ENST00000522802 ARHGAP31Q2M1Z3 1444 aa10.22□□□□□ -0.77
VPS13B-211ENST00000522802 ADGRB3O60242 1522 aa10.22□□□□□ -0.77
VPS13B-211ENST00000522802 DIP2AQ14689 1571 aa10.22□□□□□ -0.77
VPS13B-211ENST00000522802 AHDC1Q5TGY3 1603 aaPredicted RBP10.22□□□□□ -0.77
VPS13B-211ENST00000522802 CROCC2H7BZ55 1655 aa10.22□□□□□ -0.77
VPS13B-211ENST00000522802 MS4A1P11836 297 aa10.21□□□□□ -0.77
VPS13B-211ENST00000522802 MSH6P52701 1360 aa10.21□□□□□ -0.78
VPS13B-211ENST00000522802 SOWAHBA6NEL2 793 aa10.2□□□□□ -0.78
VPS13B-211ENST00000522802 CHD2O14647 1828 aaKnown RBP10.2□□□□□ -0.78
VPS13B-211ENST00000522802 RGS20O76081 388 aa10.2□□□□□ -0.78
VPS13B-211ENST00000522802 KCNA6P17658 529 aa10.2□□□□□ -0.78
VPS13B-211ENST00000522802 FGD6Q6ZV73 1430 aa10.2□□□□□ -0.78
VPS13B-211ENST00000522802 SULF1Q8IWU6 871 aa10.2□□□□□ -0.78
VPS13B-211ENST00000522802 ANKK1Q8NFD2 765 aa10.2□□□□□ -0.78
VPS13B-211ENST00000522802 WNT2BQ93097 391 aa10.2□□□□□ -0.78
VPS13B-211ENST00000522802 EP400Q96L91 3159 aa10.2□□□□□ -0.78
VPS13B-211ENST00000522802 SLC26A8Q96RN1 970 aa10.2□□□□□ -0.78
VPS13B-211ENST00000522802 DUOX2Q9NRD8 1548 aa10.2□□□□□ -0.78
VPS13B-211ENST00000522802 CDK12Q9NYV4 1490 aaPredicted RBP10.2□□□□□ -0.78
VPS13B-211ENST00000522802 MYO5BQ9ULV0 1848 aa10.2□□□□□ -0.78
VPS13B-211ENST00000522802 EID1Q9Y6B2 187 aa10.2□□□□□ -0.78
VPS13B-211ENST00000522802 RGS12O14924 1447 aa10.19□□□□□ -0.78
VPS13B-211ENST00000522802 A0A0G2JS52 829 aa10.19□□□□□ -0.78
VPS13B-211ENST00000522802 PROSER2Q86WR7 435 aaPredicted RBP10.19□□□□□ -0.78
VPS13B-211ENST00000522802 SLF2Q8IX21 1173 aa10.19□□□□□ -0.78
VPS13B-211ENST00000522802 LRCH3Q96II8 777 aa10.19□□□□□ -0.78
VPS13B-211ENST00000522802 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.19□□□□□ -0.78
VPS13B-211ENST00000522802 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.19□□□□□ -0.78
VPS13B-211ENST00000522802 SPATA31A6Q5VVP1 1343 aa10.18□□□□□ -0.78
VPS13B-211ENST00000522802 DDX11L8A8MPP1 907 aa10.18□□□□□ -0.78
VPS13B-211ENST00000522802 SLC10A3P09131 477 aa10.18□□□□□ -0.78
VPS13B-211ENST00000522802 MEX3CQ5U5Q3 659 aaKnown RBP10.18□□□□□ -0.78
VPS13B-211ENST00000522802 SLAIN2Q9P270 581 aa10.18□□□□□ -0.78
VPS13B-211ENST00000522802 CD46P15529 392 aa10.17□□□□□ -0.78
VPS13B-211ENST00000522802 RSPH4AQ5TD94 716 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms