RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 SLC26A8Q96RN1 970 aa13.71□□□□□ -0.22
RAB11FIP1-204ENST00000522774 ZNF692Q9BU19 519 aaPredicted RBP13.71□□□□□ -0.22
RAB11FIP1-204ENST00000522774 KIF16BQ96L93 1317 aa13.71□□□□□ -0.22
RAB11FIP1-204ENST00000522774 PTPRUQ92729 1446 aa13.7□□□□□ -0.22
RAB11FIP1-204ENST00000522774 ALDH1L2Q3SY69 923 aa13.7□□□□□ -0.22
RAB11FIP1-204ENST00000522774 DLG5Q8TDM6 1919 aa13.7□□□□□ -0.22
RAB11FIP1-204ENST00000522774 TSPYL6Q8N831 410 aa13.7□□□□□ -0.22
RAB11FIP1-204ENST00000522774 NRKQ7Z2Y5 1582 aa13.69□□□□□ -0.22
RAB11FIP1-204ENST00000522774 ACEP12821 1306 aa13.69□□□□□ -0.22
RAB11FIP1-204ENST00000522774 TOPAZ1Q8N9V7 1692 aa13.69□□□□□ -0.22
RAB11FIP1-204ENST00000522774 TTC21BQ7Z4L5 1316 aa13.69□□□□□ -0.22
RAB11FIP1-204ENST00000522774 PLPPR3Q6T4P5 718 aa13.69□□□□□ -0.22
RAB11FIP1-204ENST00000522774 IPO8O15397 1037 aaKnown RBP13.68□□□□□ -0.22
RAB11FIP1-204ENST00000522774 MBIPQ9NS73 344 aa13.68□□□□□ -0.22
RAB11FIP1-204ENST00000522774 ZBTB40Q9NUA8 1239 aa13.68□□□□□ -0.22
RAB11FIP1-204ENST00000522774 FAM83GA6ND36 823 aa13.68□□□□□ -0.22
RAB11FIP1-204ENST00000522774 VAMP4O75379 141 aa13.68□□□□□ -0.22
RAB11FIP1-204ENST00000522774 ZNF853P0CG23 659 aa13.68□□□□□ -0.22
RAB11FIP1-204ENST00000522774 HDAC1Q13547 482 aaPredicted RBP13.68□□□□□ -0.22
RAB11FIP1-204ENST00000522774 DAXXQ9UER7 740 aaPredicted RBP13.68□□□□□ -0.22
RAB11FIP1-204ENST00000522774 ELL2O00472 640 aaPredicted RBP13.67□□□□□ -0.22
RAB11FIP1-204ENST00000522774 IFT57Q9NWB7 429 aa13.67□□□□□ -0.22
RAB11FIP1-204ENST00000522774 GNAI1P63096 354 aa13.67□□□□□ -0.22
RAB11FIP1-204ENST00000522774 AEBP1Q8IUX7 1158 aa13.67□□□□□ -0.22
RAB11FIP1-204ENST00000522774 DCTN1Q14203 1278 aa13.67□□□□□ -0.22
RAB11FIP1-204ENST00000522774 OVOS2A0A0J9YW53 1432 aa13.66□□□□□ -0.22
RAB11FIP1-204ENST00000522774 OVOS2Q6IE36 1432 aa13.66□□□□□ -0.22
RAB11FIP1-204ENST00000522774 CALD1Q05682 793 aaKnown RBP13.66□□□□□ -0.22
RAB11FIP1-204ENST00000522774 EIF4A2Q14240 407 aaKnown RBP13.66□□□□□ -0.22
RAB11FIP1-204ENST00000522774 MRPL50Q8N5N7 158 aaKnown RBP13.66□□□□□ -0.22
RAB11FIP1-204ENST00000522774 PLEKHG3A1L390 1219 aa13.66□□□□□ -0.22
RAB11FIP1-204ENST00000522774 USP6P35125 1406 aa13.66□□□□□ -0.22
RAB11FIP1-204ENST00000522774 BRPF1P55201 1214 aaPredicted RBP13.65□□□□□ -0.22
RAB11FIP1-204ENST00000522774 ZNF428Q96B54 188 aa13.65□□□□□ -0.22
RAB11FIP1-204ENST00000522774 SMC5Q8IY18 1101 aa13.64□□□□□ -0.23
RAB11FIP1-204ENST00000522774 C8orf58Q8NAV2 365 aa13.64□□□□□ -0.23
RAB11FIP1-204ENST00000522774 CFAP44Q96MT7 982 aa13.64□□□□□ -0.23
RAB11FIP1-204ENST00000522774 AMOTL2Q9Y2J4 779 aa13.64□□□□□ -0.23
RAB11FIP1-204ENST00000522774 EID1Q9Y6B2 187 aa13.64□□□□□ -0.23
RAB11FIP1-204ENST00000522774 PEAK1Q9H792 1746 aa13.64□□□□□ -0.23
RAB11FIP1-204ENST00000522774 SULT6B1Q6IMI4 303 aa13.64□□□□□ -0.23
RAB11FIP1-204ENST00000522774 SOX12O15370 315 aa13.63□□□□□ -0.23
RAB11FIP1-204ENST00000522774 LMOD3Q0VAK6 560 aa13.63□□□□□ -0.23
RAB11FIP1-204ENST00000522774 TWISTNBQ3B726 338 aaPredicted RBP13.63□□□□□ -0.23
RAB11FIP1-204ENST00000522774 USP35Q9P2H5 1018 aa13.63□□□□□ -0.23
RAB11FIP1-204ENST00000522774 SLIT1O75093 1534 aa13.63□□□□□ -0.23
RAB11FIP1-204ENST00000522774 ARHGAP23Q9P227 1491 aa13.63□□□□□ -0.23
RAB11FIP1-204ENST00000522774 PTCH1Q13635 1447 aa13.63□□□□□ -0.23
RAB11FIP1-204ENST00000522774 HSP90AB2PQ58FF8 381 aa13.63□□□□□ -0.23
RAB11FIP1-204ENST00000522774 NALCNQ8IZF0 1738 aa13.63□□□□□ -0.23
RAB11FIP1-204ENST00000522774 SSH2Q76I76 1423 aa13.62□□□□□ -0.23
RAB11FIP1-204ENST00000522774 NFKBIBQ15653 356 aa13.62□□□□□ -0.23
RAB11FIP1-204ENST00000522774 PIK3R4Q99570 1358 aa13.61□□□□□ -0.23
RAB11FIP1-204ENST00000522774 ZBTB7BO15156 539 aaPredicted RBP13.61□□□□□ -0.23
RAB11FIP1-204ENST00000522774 ARHGAP45Q92619 1136 aa13.61□□□□□ -0.23
RAB11FIP1-204ENST00000522774 TBC1D32Q96NH3 1257 aa13.61□□□□□ -0.23
RAB11FIP1-204ENST00000522774 C1orf115Q9H7X2 142 aa13.61□□□□□ -0.23
RAB11FIP1-204ENST00000522774 USP31Q70CQ4 1352 aa13.61□□□□□ -0.23
RAB11FIP1-204ENST00000522774 TBX22Q9Y458 520 aa13.6□□□□□ -0.23
RAB11FIP1-204ENST00000522774 FER1L4A9Z1Z3 1794 aa13.6□□□□□ -0.23
RAB11FIP1-204ENST00000522774 RGPD8O14715 1765 aaPredicted RBP13.6□□□□□ -0.23
RAB11FIP1-204ENST00000522774 ABCC4O15439 1325 aa13.6□□□□□ -0.23
RAB11FIP1-204ENST00000522774 BCL11AQ9H165 835 aa13.6□□□□□ -0.23
RAB11FIP1-204ENST00000522774 RGPD1P0DJD0 1748 aa13.59□□□□□ -0.23
RAB11FIP1-204ENST00000522774 KRT24Q2M2I5 525 aa13.59□□□□□ -0.23
RAB11FIP1-204ENST00000522774 NUCB1Q02818 461 aa13.59□□□□□ -0.23
RAB11FIP1-204ENST00000522774 MCM10Q7L590 875 aa13.59□□□□□ -0.23
RAB11FIP1-204ENST00000522774 UPF2Q9HAU5 1272 aaKnown RBP13.59□□□□□ -0.23
RAB11FIP1-204ENST00000522774 DIP2AQ14689 1571 aa13.59□□□□□ -0.23
RAB11FIP1-204ENST00000522774 LNPKQ9C0E8 428 aa13.58□□□□□ -0.23
RAB11FIP1-204ENST00000522774 MAP3K19Q56UN5 1328 aa13.58□□□□□ -0.24
RAB11FIP1-204ENST00000522774 NGDNQ8NEJ9 315 aaKnown RBP13.57□□□□□ -0.24
RAB11FIP1-204ENST00000522774 SIRT2Q8IXJ6 389 aa13.56□□□□□ -0.24
RAB11FIP1-204ENST00000522774 THEMISQ8N1K5 641 aaPredicted RBP13.56□□□□□ -0.24
RAB11FIP1-204ENST00000522774 TTC21AQ8NDW8 1320 aa13.56□□□□□ -0.24
RAB11FIP1-204ENST00000522774 CHD1LQ86WJ1 897 aa13.56□□□□□ -0.24
RAB11FIP1-204ENST00000522774 RIMS1Q86UR5 1692 aaKnown RBP13.56□□□□□ -0.24
RAB11FIP1-204ENST00000522774 FMN2Q9NZ56 1722 aa13.56□□□□□ -0.24
RAB11FIP1-204ENST00000522774 MFAP1P55081 439 aaKnown RBP13.55□□□□□ -0.24
RAB11FIP1-204ENST00000522774 CHL1O00533 1208 aa13.55□□□□□ -0.24
RAB11FIP1-204ENST00000522774 BECN1Q14457 450 aa13.55□□□□□ -0.24
RAB11FIP1-204ENST00000522774 XRN1Q8IZH2 1706 aaKnown RBP13.55□□□□□ -0.24
RAB11FIP1-204ENST00000522774 PIK3C2AO00443 1686 aa13.55□□□□□ -0.24
RAB11FIP1-204ENST00000522774 FOXO3O43524 673 aa13.55□□□□□ -0.24
RAB11FIP1-204ENST00000522774 API5Q9BZZ5 524 aaKnown RBP13.55□□□□□ -0.24
RAB11FIP1-204ENST00000522774 FRAT2O75474 233 aaPredicted RBP13.54□□□□□ -0.24
RAB11FIP1-204ENST00000522774 KCNA6P17658 529 aa13.54□□□□□ -0.24
RAB11FIP1-204ENST00000522774 ARHGEF10O15013 1369 aa13.54□□□□□ -0.24
RAB11FIP1-204ENST00000522774 SBNO1A3KN83 1393 aa13.53□□□□□ -0.24
RAB11FIP1-204ENST00000522774 FLT4P35916 1363 aa13.53□□□□□ -0.24
RAB11FIP1-204ENST00000522774 ANKRD45Q5TZF3 282 aa13.53□□□□□ -0.24
RAB11FIP1-204ENST00000522774 TBC1D2Q9BYX2 928 aa13.53□□□□□ -0.24
RAB11FIP1-204ENST00000522774 CRB1P82279 1406 aa13.53□□□□□ -0.24
RAB11FIP1-204ENST00000522774 SLKQ9H2G2 1235 aaPredicted RBP13.53□□□□□ -0.24
RAB11FIP1-204ENST00000522774 CHMP4BQ9H444 224 aaKnown RBP13.53□□□□□ -0.24
RAB11FIP1-204ENST00000522774 MTHFSDQ2M296 383 aaKnown RBP13.53□□□□□ -0.24
RAB11FIP1-204ENST00000522774 C22orf23Q9BZE7 217 aa13.53□□□□□ -0.24
RAB11FIP1-204ENST00000522774 MIS18AQ9NYP9 233 aa13.53□□□□□ -0.24
RAB11FIP1-204ENST00000522774 RGS12O14924 1447 aa13.52□□□□□ -0.24
RAB11FIP1-204ENST00000522774 GCC1Q96CN9 775 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms