RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 CT47B1P0C2W7 299 aaPredicted RBP34.95■■■■□ 3.18
COL13A1-212ENST00000520133 AMPHP49418 695 aa34.94■■■■□ 3.18
COL13A1-212ENST00000520133 RGPD1P0DJD0 1748 aa34.94■■■■□ 3.18
COL13A1-212ENST00000520133 FANCIQ9NVI1 1328 aa34.93■■■■□ 3.18
COL13A1-212ENST00000520133 CALD1Q05682 793 aaKnown RBP34.92■■■■□ 3.18
COL13A1-212ENST00000520133 C20orf194Q5TEA3 1177 aa34.92■■■■□ 3.18
COL13A1-212ENST00000520133 DLG5Q8TDM6 1919 aa34.92■■■■□ 3.18
COL13A1-212ENST00000520133 TSHZ2Q9NRE2 1034 aa34.92■■■■□ 3.18
COL13A1-212ENST00000520133 NCOA3Q9Y6Q9 1424 aa34.91■■■■□ 3.18
COL13A1-212ENST00000520133 HSPA2P54652 639 aa34.91■■■■□ 3.18
COL13A1-212ENST00000520133 LMOD3Q0VAK6 560 aa34.91■■■■□ 3.18
COL13A1-212ENST00000520133 NUTM2GQ5VZR2 741 aa34.91■■■■□ 3.18
COL13A1-212ENST00000520133 SULT6B1Q6IMI4 303 aa34.9■■■■□ 3.18
COL13A1-212ENST00000520133 KDM4FA0A1W2PPD8 638 aa34.9■■■■□ 3.18
COL13A1-212ENST00000520133 RARSP54136 660 aaKnown RBP34.9■■■■□ 3.18
COL13A1-212ENST00000520133 STRCP1A6NGW2 1772 aa34.89■■■■□ 3.18
COL13A1-212ENST00000520133 KIF1AQ12756 1690 aa34.89■■■■□ 3.18
COL13A1-212ENST00000520133 ARHGEF10O15013 1369 aa34.88■■■■□ 3.17
COL13A1-212ENST00000520133 TSR2Q969E8 191 aaKnown RBP34.88■■■■□ 3.17
COL13A1-212ENST00000520133 ORAI2Q96SN7 254 aa34.88■■■■□ 3.17
COL13A1-212ENST00000520133 TMEM94Q12767 1356 aa34.85■■■■□ 3.17
COL13A1-212ENST00000520133 C1orf167Q5SNV9 1468 aa34.85■■■■□ 3.17
COL13A1-212ENST00000520133 CANXP27824 592 aaKnown RBP34.85■■■■□ 3.17
COL13A1-212ENST00000520133 DCCP43146 1447 aa34.84■■■■□ 3.17
COL13A1-212ENST00000520133 PDE3AQ14432 1141 aa34.84■■■■□ 3.17
COL13A1-212ENST00000520133 AEBP1Q8IUX7 1158 aa34.84■■■■□ 3.17
COL13A1-212ENST00000520133 LMTK3Q96Q04 1460 aa34.83■■■■□ 3.17
COL13A1-212ENST00000520133 ATF3P18847 181 aa34.83■■■■□ 3.17
COL13A1-212ENST00000520133 EXOSC9Q06265 439 aaKnown RBP34.83■■■■□ 3.17
COL13A1-212ENST00000520133 FOXO3O43524 673 aa34.82■■■■□ 3.16
COL13A1-212ENST00000520133 HOXC9P31274 260 aa34.81■■■■□ 3.16
COL13A1-212ENST00000520133 LTN1O94822 1766 aa34.81■■■■□ 3.16
COL13A1-212ENST00000520133 RTL1A6NKG5 1358 aa34.81■■■■□ 3.16
COL13A1-212ENST00000520133 KCNH5Q8NCM2 988 aa34.8■■■■□ 3.16
COL13A1-212ENST00000520133 GNAI1P63096 354 aa34.78■■■■□ 3.16
COL13A1-212ENST00000520133 IFT57Q9NWB7 429 aa34.77■■■■□ 3.16
COL13A1-212ENST00000520133 IGSF1Q8N6C5 1336 aa34.77■■■■□ 3.16
COL13A1-212ENST00000520133 KDRP35968 1356 aa34.76■■■■□ 3.16
COL13A1-212ENST00000520133 STRCQ7RTU9 1775 aa34.76■■■■□ 3.16
COL13A1-212ENST00000520133 FRAT1Q92837 279 aaPredicted RBP34.76■■■■□ 3.15
COL13A1-212ENST00000520133 NFAT5O94916 1531 aa34.75■■■■□ 3.15
COL13A1-212ENST00000520133 TRPM3Q9HCF6 1732 aaPredicted RBP34.75■■■■□ 3.15
COL13A1-212ENST00000520133 MST1RQ04912 1400 aa34.75■■■■□ 3.15
COL13A1-212ENST00000520133 EYA1Q99502 592 aa34.74■■■■□ 3.15
COL13A1-212ENST00000520133 LAS1LQ9Y4W2 734 aaKnown RBP34.74■■■■□ 3.15
COL13A1-212ENST00000520133 KRT28Q7Z3Y7 464 aa34.73■■■■□ 3.15
COL13A1-212ENST00000520133 CADPS2Q86UW7 1296 aa34.72■■■■□ 3.15
COL13A1-212ENST00000520133 THUMPD2Q9BTF0 503 aaKnown RBP34.72■■■■□ 3.15
COL13A1-212ENST00000520133 BCL2L13Q9BXK5 485 aa34.71■■■■□ 3.15
COL13A1-212ENST00000520133 XPCQ01831 940 aaPredicted RBP34.7■■■■□ 3.15
COL13A1-212ENST00000520133 PHRF1Q9P1Y6 1649 aaKnown RBP34.7■■■■□ 3.15
COL13A1-212ENST00000520133 ZNF853P0CG23 659 aa34.69■■■■□ 3.14
COL13A1-212ENST00000520133 IP6K1Q92551 441 aa34.69■■■■□ 3.14
COL13A1-212ENST00000520133 CFAP44Q96MT7 982 aa34.69■■■■□ 3.14
COL13A1-212ENST00000520133 MSH6P52701 1360 aa34.69■■■■□ 3.14
COL13A1-212ENST00000520133 ZNF428Q96B54 188 aa34.69■■■■□ 3.14
COL13A1-212ENST00000520133 SMC4Q9NTJ3 1288 aa34.68■■■■□ 3.14
COL13A1-212ENST00000520133 SLIT3O75094 1523 aa34.68■■■■□ 3.14
COL13A1-212ENST00000520133 FAM83GA6ND36 823 aa34.66■■■■□ 3.14
COL13A1-212ENST00000520133 MS4A1P11836 297 aa34.66■■■■□ 3.14
COL13A1-212ENST00000520133 ZKSCAN2Q63HK3 967 aa34.65■■■■□ 3.14
COL13A1-212ENST00000520133 LMOD2Q6P5Q4 547 aa34.65■■■■□ 3.14
COL13A1-212ENST00000520133 XIRP1Q702N8 1843 aaKnown RBP34.64■■■■□ 3.14
COL13A1-212ENST00000520133 ALDH1L2Q3SY69 923 aa34.64■■■■□ 3.14
COL13A1-212ENST00000520133 PANK1Q8TE04 598 aa34.64■■■■□ 3.14
COL13A1-212ENST00000520133 GCP02774 474 aa34.63■■■■□ 3.13
COL13A1-212ENST00000520133 GAS2L2Q8NHY3 880 aa34.63■■■■□ 3.13
COL13A1-212ENST00000520133 SSH1Q8WYL5 1049 aa34.63■■■■□ 3.13
COL13A1-212ENST00000520133 MBIPQ9NS73 344 aa34.63■■■■□ 3.13
COL13A1-212ENST00000520133 USP19O94966 1318 aa34.62■■■■□ 3.13
COL13A1-212ENST00000520133 AAMPQ13685 434 aa34.62■■■■□ 3.13
COL13A1-212ENST00000520133 DCTN1Q14203 1278 aa34.62■■■■□ 3.13
COL13A1-212ENST00000520133 LTV1Q96GA3 475 aaPredicted RBP34.62■■■■□ 3.13
COL13A1-212ENST00000520133 ALS2Q96Q42 1657 aa34.61■■■■□ 3.13
COL13A1-212ENST00000520133 COG6Q9Y2V7 657 aa34.61■■■■□ 3.13
COL13A1-212ENST00000520133 MTHFSDQ2M296 383 aaKnown RBP34.6■■■■□ 3.13
COL13A1-212ENST00000520133 KIF16BQ96L93 1317 aa34.58■■■■□ 3.13
COL13A1-212ENST00000520133 CENPQQ7L2Z9 268 aaPredicted RBP34.58■■■■□ 3.13
COL13A1-212ENST00000520133 RTF1Q92541 710 aaKnown RBP34.58■■■■□ 3.13
COL13A1-212ENST00000520133 NPHP3Q7Z494 1330 aa34.57■■■■□ 3.13
COL13A1-212ENST00000520133 ARHGEF25Q86VW2 580 aa34.57■■■■□ 3.12
COL13A1-212ENST00000520133 ZBTB7CA1YPR0 619 aa34.55■■■■□ 3.12
COL13A1-212ENST00000520133 FTSJ3Q8IY81 847 aaKnown RBP34.55■■■■□ 3.12
COL13A1-212ENST00000520133 KDM2BQ8NHM5 1336 aa34.55■■■■□ 3.12
COL13A1-212ENST00000520133 IPO8O15397 1037 aaKnown RBP34.55■■■■□ 3.12
COL13A1-212ENST00000520133 VAMP4O75379 141 aa34.55■■■■□ 3.12
COL13A1-212ENST00000520133 MCM10Q7L590 875 aa34.55■■■■□ 3.12
COL13A1-212ENST00000520133 DZIP1LQ8IYY4 767 aaKnown RBP34.55■■■■□ 3.12
COL13A1-212ENST00000520133 CLUAP1Q96AJ1 413 aa34.54■■■■□ 3.12
COL13A1-212ENST00000520133 HTATSF1O43719 755 aaKnown RBP34.53■■■■□ 3.12
COL13A1-212ENST00000520133 RLBP1P12271 317 aa34.53■■■■□ 3.12
COL13A1-212ENST00000520133 BRPF1P55201 1214 aaPredicted RBP34.53■■■■□ 3.12
COL13A1-212ENST00000520133 ATF7IPQ6VMQ6 1270 aa34.52■■■■□ 3.12
COL13A1-212ENST00000520133 RBM19Q9Y4C8 960 aaKnown RBP34.52■■■■□ 3.12
COL13A1-212ENST00000520133 CHL1O00533 1208 aa34.51■■■■□ 3.12
COL13A1-212ENST00000520133 TWISTNBQ3B726 338 aaPredicted RBP34.51■■■■□ 3.12
COL13A1-212ENST00000520133 NOB1Q9ULX3 412 aaKnown RBP34.51■■■■□ 3.12
COL13A1-212ENST00000520133 TNNQ9UQP3 1299 aa34.51■■■■□ 3.11
COL13A1-212ENST00000520133 HAP1P54257 671 aaPredicted RBP34.5■■■■□ 3.11
COL13A1-212ENST00000520133 MVPQ14764 893 aaKnown RBP34.49■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms