RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 TSR2Q969E8 191 aaKnown RBP23.94■■□□□ 1.42
FAM49B-214ENST00000519540 NUTM2GQ5VZR2 741 aa23.93■■□□□ 1.42
FAM49B-214ENST00000519540 FLT4P35916 1363 aa23.93■■□□□ 1.42
FAM49B-214ENST00000519540 RGPD1P0DJD0 1748 aa23.92■■□□□ 1.42
FAM49B-214ENST00000519540 CT47B1P0C2W7 299 aaPredicted RBP23.92■■□□□ 1.42
FAM49B-214ENST00000519540 SULT6B1Q6IMI4 303 aa23.92■■□□□ 1.42
FAM49B-214ENST00000519540 PSME1Q06323 249 aa23.91■■□□□ 1.42
FAM49B-214ENST00000519540 AEBP1Q8IUX7 1158 aa23.91■■□□□ 1.42
FAM49B-214ENST00000519540 AMPHP49418 695 aa23.9■■□□□ 1.42
FAM49B-214ENST00000519540 EXOSC9Q06265 439 aaKnown RBP23.9■■□□□ 1.42
FAM49B-214ENST00000519540 PDE3AQ14432 1141 aa23.9■■□□□ 1.42
FAM49B-214ENST00000519540 ORAI2Q96SN7 254 aa23.89■■□□□ 1.42
FAM49B-214ENST00000519540 C19orf44Q9H6X5 657 aa23.89■■□□□ 1.42
FAM49B-214ENST00000519540 KIF24Q5T7B8 1368 aa23.88■■□□□ 1.41
FAM49B-214ENST00000519540 HSPA2P54652 639 aa23.88■■□□□ 1.41
FAM49B-214ENST00000519540 DLG5Q8TDM6 1919 aa23.88■■□□□ 1.41
FAM49B-214ENST00000519540 CALD1Q05682 793 aaKnown RBP23.88■■□□□ 1.41
FAM49B-214ENST00000519540 LMOD3Q0VAK6 560 aa23.87■■□□□ 1.41
FAM49B-214ENST00000519540 KDM4FA0A1W2PPD8 638 aa23.86■■□□□ 1.41
FAM49B-214ENST00000519540 ARHGEF10O15013 1369 aa23.86■■□□□ 1.41
FAM49B-214ENST00000519540 CANXP27824 592 aaKnown RBP23.86■■□□□ 1.41
FAM49B-214ENST00000519540 STRCP1A6NGW2 1772 aa23.85■■□□□ 1.41
FAM49B-214ENST00000519540 FRAT1Q92837 279 aaPredicted RBP23.85■■□□□ 1.41
FAM49B-214ENST00000519540 THUMPD2Q9BTF0 503 aaKnown RBP23.84■■□□□ 1.41
FAM49B-214ENST00000519540 FOXO3O43524 673 aa23.84■■□□□ 1.41
FAM49B-214ENST00000519540 HOXC9P31274 260 aa23.84■■□□□ 1.41
FAM49B-214ENST00000519540 BCL2L13Q9BXK5 485 aa23.84■■□□□ 1.41
FAM49B-214ENST00000519540 C1orf167Q5SNV9 1468 aa23.83■■□□□ 1.4
FAM49B-214ENST00000519540 TMEM94Q12767 1356 aa23.83■■□□□ 1.4
FAM49B-214ENST00000519540 EYA1Q99502 592 aa23.82■■□□□ 1.4
FAM49B-214ENST00000519540 IFT57Q9NWB7 429 aa23.82■■□□□ 1.4
FAM49B-214ENST00000519540 NCOA3Q9Y6Q9 1424 aa23.81■■□□□ 1.4
FAM49B-214ENST00000519540 ZNF853P0CG23 659 aa23.81■■□□□ 1.4
FAM49B-214ENST00000519540 GNAI1P63096 354 aa23.81■■□□□ 1.4
FAM49B-214ENST00000519540 LAS1LQ9Y4W2 734 aaKnown RBP23.81■■□□□ 1.4
FAM49B-214ENST00000519540 IGSF1Q8N6C5 1336 aa23.81■■□□□ 1.4
FAM49B-214ENST00000519540 KDRP35968 1356 aa23.81■■□□□ 1.4
FAM49B-214ENST00000519540 PANK1Q8TE04 598 aa23.81■■□□□ 1.4
FAM49B-214ENST00000519540 FAM83GA6ND36 823 aa23.79■■□□□ 1.4
FAM49B-214ENST00000519540 NFAT5O94916 1531 aa23.79■■□□□ 1.4
FAM49B-214ENST00000519540 RBM19Q9Y4C8 960 aaKnown RBP23.79■■□□□ 1.4
FAM49B-214ENST00000519540 KIF1AQ12756 1690 aa23.79■■□□□ 1.4
FAM49B-214ENST00000519540 RTL1A6NKG5 1358 aa23.79■■□□□ 1.4
FAM49B-214ENST00000519540 ATF3P18847 181 aa23.78■■□□□ 1.4
FAM49B-214ENST00000519540 XPCQ01831 940 aaPredicted RBP23.78■■□□□ 1.4
FAM49B-214ENST00000519540 KCNH5Q8NCM2 988 aa23.78■■□□□ 1.4
FAM49B-214ENST00000519540 SSH1Q8WYL5 1049 aa23.78■■□□□ 1.4
FAM49B-214ENST00000519540 LMTK3Q96Q04 1460 aa23.78■■□□□ 1.4
FAM49B-214ENST00000519540 CFAP44Q96MT7 982 aa23.77■■□□□ 1.4
FAM49B-214ENST00000519540 SMC4Q9NTJ3 1288 aa23.77■■□□□ 1.4
FAM49B-214ENST00000519540 COG6Q9Y2V7 657 aa23.77■■□□□ 1.4
FAM49B-214ENST00000519540 DCCP43146 1447 aa23.77■■□□□ 1.4
FAM49B-214ENST00000519540 LTN1O94822 1766 aa23.77■■□□□ 1.4
FAM49B-214ENST00000519540 DCTN1Q14203 1278 aa23.76■■□□□ 1.39
FAM49B-214ENST00000519540 KRT28Q7Z3Y7 464 aa23.76■■□□□ 1.39
FAM49B-214ENST00000519540 MBIPQ9NS73 344 aa23.76■■□□□ 1.39
FAM49B-214ENST00000519540 MST1RQ04912 1400 aa23.76■■□□□ 1.39
FAM49B-214ENST00000519540 KDM2BQ8NHM5 1336 aa23.76■■□□□ 1.39
FAM49B-214ENST00000519540 TNNQ9UQP3 1299 aa23.76■■□□□ 1.39
FAM49B-214ENST00000519540 TRPM3Q9HCF6 1732 aaPredicted RBP23.75■■□□□ 1.39
FAM49B-214ENST00000519540 RLBP1P12271 317 aa23.75■■□□□ 1.39
FAM49B-214ENST00000519540 ZKSCAN2Q63HK3 967 aa23.75■■□□□ 1.39
FAM49B-214ENST00000519540 IP6K1Q92551 441 aa23.75■■□□□ 1.39
FAM49B-214ENST00000519540 ALDH1L2Q3SY69 923 aa23.74■■□□□ 1.39
FAM49B-214ENST00000519540 ZNF428Q96B54 188 aa23.74■■□□□ 1.39
FAM49B-214ENST00000519540 STRCQ7RTU9 1775 aa23.73■■□□□ 1.39
FAM49B-214ENST00000519540 MTHFSDQ2M296 383 aaKnown RBP23.72■■□□□ 1.39
FAM49B-214ENST00000519540 CENPQQ7L2Z9 268 aaPredicted RBP23.72■■□□□ 1.39
FAM49B-214ENST00000519540 LTV1Q96GA3 475 aaPredicted RBP23.72■■□□□ 1.39
FAM49B-214ENST00000519540 SLIT3O75094 1523 aa23.71■■□□□ 1.39
FAM49B-214ENST00000519540 VAMP4O75379 141 aa23.71■■□□□ 1.39
FAM49B-214ENST00000519540 GCP02774 474 aa23.71■■□□□ 1.39
FAM49B-214ENST00000519540 CLUAP1Q96AJ1 413 aa23.71■■□□□ 1.39
FAM49B-214ENST00000519540 PHRF1Q9P1Y6 1649 aaKnown RBP23.71■■□□□ 1.39
FAM49B-214ENST00000519540 MS4A1P11836 297 aa23.71■■□□□ 1.39
FAM49B-214ENST00000519540 CADPS2Q86UW7 1296 aa23.71■■□□□ 1.39
FAM49B-214ENST00000519540 AAMPQ13685 434 aa23.7■■□□□ 1.38
FAM49B-214ENST00000519540 MCM10Q7L590 875 aa23.7■■□□□ 1.38
FAM49B-214ENST00000519540 LMOD2Q6P5Q4 547 aa23.69■■□□□ 1.38
FAM49B-214ENST00000519540 DZIP1LQ8IYY4 767 aaKnown RBP23.69■■□□□ 1.38
FAM49B-214ENST00000519540 TSPYL6Q8N831 410 aa23.69■■□□□ 1.38
FAM49B-214ENST00000519540 USP19O94966 1318 aa23.69■■□□□ 1.38
FAM49B-214ENST00000519540 NOB1Q9ULX3 412 aaKnown RBP23.69■■□□□ 1.38
FAM49B-214ENST00000519540 BRPF1P55201 1214 aaPredicted RBP23.68■■□□□ 1.38
FAM49B-214ENST00000519540 GAS2L2Q8NHY3 880 aa23.68■■□□□ 1.38
FAM49B-214ENST00000519540 CHL1O00533 1208 aa23.67■■□□□ 1.38
FAM49B-214ENST00000519540 TRIM27P14373 513 aa23.67■■□□□ 1.38
FAM49B-214ENST00000519540 ATF7IPQ6VMQ6 1270 aa23.67■■□□□ 1.38
FAM49B-214ENST00000519540 ARHGEF25Q86VW2 580 aa23.67■■□□□ 1.38
FAM49B-214ENST00000519540 KIF16BQ96L93 1317 aa23.67■■□□□ 1.38
FAM49B-214ENST00000519540 MSH6P52701 1360 aa23.67■■□□□ 1.38
FAM49B-214ENST00000519540 TCERG1O14776 1098 aaKnown RBP23.66■■□□□ 1.38
FAM49B-214ENST00000519540 MVPQ14764 893 aaKnown RBP23.66■■□□□ 1.38
FAM49B-214ENST00000519540 FTSJ3Q8IY81 847 aaKnown RBP23.66■■□□□ 1.38
FAM49B-214ENST00000519540 C8orf58Q8NAV2 365 aa23.66■■□□□ 1.38
FAM49B-214ENST00000519540 IPO8O15397 1037 aaKnown RBP23.66■■□□□ 1.38
FAM49B-214ENST00000519540 CRB1P82279 1406 aa23.66■■□□□ 1.38
FAM49B-214ENST00000519540 TWISTNBQ3B726 338 aaPredicted RBP23.66■■□□□ 1.38
FAM49B-214ENST00000519540 XIRP1Q702N8 1843 aaKnown RBP23.65■■□□□ 1.38
FAM49B-214ENST00000519540 ALS2Q96Q42 1657 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms