RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 ERICH4A6NGS2 130 aa16.45■□□□□ 0.22
PABPC1-208ENST00000519004 FOXD4L5Q5VV16 416 aaPredicted RBP16.45■□□□□ 0.22
PABPC1-208ENST00000519004 KRT222Q8N1A0 295 aa16.45■□□□□ 0.22
PABPC1-208ENST00000519004 FOXD4L4Q8WXT5 416 aaPredicted RBP16.45■□□□□ 0.22
PABPC1-208ENST00000519004 TSPYL1Q9H0U9 437 aa16.45■□□□□ 0.22
PABPC1-208ENST00000519004 CLTCL1P53675 1640 aa16.44■□□□□ 0.22
PABPC1-208ENST00000519004 PHF14O94880 888 aa16.44■□□□□ 0.22
PABPC1-208ENST00000519004 CT47B1P0C2W7 299 aaPredicted RBP16.44■□□□□ 0.22
PABPC1-208ENST00000519004 ANKRD45Q5TZF3 282 aa16.44■□□□□ 0.22
PABPC1-208ENST00000519004 REREQ9P2R6 1566 aa16.44■□□□□ 0.22
PABPC1-208ENST00000519004 AEBP1Q8IUX7 1158 aa16.44■□□□□ 0.22
PABPC1-208ENST00000519004 SSH1Q8WYL5 1049 aa16.44■□□□□ 0.22
PABPC1-208ENST00000519004 CEP152O94986 1710 aa16.43■□□□□ 0.22
PABPC1-208ENST00000519004 FAM53CQ9NYF3 392 aa16.43■□□□□ 0.22
PABPC1-208ENST00000519004 FEZ2Q9UHY8 353 aaPredicted RBP16.43■□□□□ 0.22
PABPC1-208ENST00000519004 YEATS2Q9ULM3 1422 aa16.43■□□□□ 0.22
PABPC1-208ENST00000519004 NAA30Q147X3 362 aaPredicted RBP16.43■□□□□ 0.22
PABPC1-208ENST00000519004 USP26Q9BXU7 913 aa16.43■□□□□ 0.22
PABPC1-208ENST00000519004 RAPGEF6Q8TEU7 1601 aa16.42■□□□□ 0.22
PABPC1-208ENST00000519004 NOB1Q9ULX3 412 aaKnown RBP16.42■□□□□ 0.22
PABPC1-208ENST00000519004 UHRF1BP1LA0JNW5 1464 aa16.42■□□□□ 0.22
PABPC1-208ENST00000519004 KDM4AO75164 1064 aa16.41■□□□□ 0.22
PABPC1-208ENST00000519004 NOS1P29475 1434 aa16.41■□□□□ 0.22
PABPC1-208ENST00000519004 BRD1O95696 1058 aa16.41■□□□□ 0.22
PABPC1-208ENST00000519004 TSR2Q969E8 191 aaKnown RBP16.41■□□□□ 0.22
PABPC1-208ENST00000519004 CARD14Q9BXL6 1004 aa16.41■□□□□ 0.22
PABPC1-208ENST00000519004 KDM5AP29375 1690 aaKnown RBP16.4■□□□□ 0.22
PABPC1-208ENST00000519004 SMTNL1A8MU46 457 aa16.4■□□□□ 0.22
PABPC1-208ENST00000519004 GSPT1P15170 499 aaKnown RBP16.4■□□□□ 0.22
PABPC1-208ENST00000519004 PPIP5K1Q6PFW1 1433 aa16.4■□□□□ 0.22
PABPC1-208ENST00000519004 ST18O60284 1047 aa16.4■□□□□ 0.22
PABPC1-208ENST00000519004 GADD45BO75293 160 aaPredicted RBP16.4■□□□□ 0.22
PABPC1-208ENST00000519004 HCLS1P14317 486 aaPredicted RBP16.4■□□□□ 0.22
PABPC1-208ENST00000519004 FAM193AP78312 1265 aa16.4■□□□□ 0.22
PABPC1-208ENST00000519004 GCC1Q96CN9 775 aa16.4■□□□□ 0.22
PABPC1-208ENST00000519004 SCAF11Q99590 1463 aaKnown RBP16.4■□□□□ 0.22
PABPC1-208ENST00000519004 AP5Z1O43299 807 aa16.39■□□□□ 0.21
PABPC1-208ENST00000519004 EXOSC9Q06265 439 aaKnown RBP16.39■□□□□ 0.21
PABPC1-208ENST00000519004 ZBTB9Q96C00 473 aa16.39■□□□□ 0.21
PABPC1-208ENST00000519004 TRERF1Q96PN7 1200 aa16.39■□□□□ 0.21
PABPC1-208ENST00000519004 TPM3P06753 285 aa16.39■□□□□ 0.21
PABPC1-208ENST00000519004 MADDQ8WXG6 1647 aa16.38■□□□□ 0.21
PABPC1-208ENST00000519004 CREBRFQ8IUR6 639 aa16.38■□□□□ 0.21
PABPC1-208ENST00000519004 KLHL34Q8N239 644 aa16.38■□□□□ 0.21
PABPC1-208ENST00000519004 NCBP3Q53F19 620 aaKnown RBP16.37■□□□□ 0.21
PABPC1-208ENST00000519004 YY1AP1Q9H869 796 aa16.37■□□□□ 0.21
PABPC1-208ENST00000519004 HNRNPH2P55795 449 aaKnown RBP16.37■□□□□ 0.21
PABPC1-208ENST00000519004 SMARCA5O60264 1052 aaPredicted RBP16.36■□□□□ 0.21
PABPC1-208ENST00000519004 CYP2C19P33261 490 aa16.36■□□□□ 0.21
PABPC1-208ENST00000519004 KMT5BQ4FZB7 885 aa16.36■□□□□ 0.21
PABPC1-208ENST00000519004 ST7Q9NRC1 585 aa16.36■□□□□ 0.21
PABPC1-208ENST00000519004 ZNF397Q8NF99 534 aaPredicted RBP16.36■□□□□ 0.21
PABPC1-208ENST00000519004 EFCC1Q9HA90 598 aa16.36■□□□□ 0.21
PABPC1-208ENST00000519004 PPRC1Q5VV67 1664 aaKnown RBP16.35■□□□□ 0.21
PABPC1-208ENST00000519004 MED14O60244 1454 aa16.35■□□□□ 0.21
PABPC1-208ENST00000519004 RAD51AP2Q09MP3 1159 aa16.35■□□□□ 0.21
PABPC1-208ENST00000519004 CCDC183Q5T5S1 534 aa16.35■□□□□ 0.21
PABPC1-208ENST00000519004 GDPD2Q9HCC8 539 aa16.35■□□□□ 0.21
PABPC1-208ENST00000519004 ADGRB2O60241 1585 aa16.35■□□□□ 0.21
PABPC1-208ENST00000519004 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.35■□□□□ 0.21
PABPC1-208ENST00000519004 TSPY4P0CV99 314 aa16.35■□□□□ 0.21
PABPC1-208ENST00000519004 TSPY10P0CW01 314 aa16.35■□□□□ 0.21
PABPC1-208ENST00000519004 MMP14P50281 582 aa16.35■□□□□ 0.21
PABPC1-208ENST00000519004 RNF216Q9NWF9 866 aaPredicted RBP16.34■□□□□ 0.21
PABPC1-208ENST00000519004 KIAA0556O60303 1618 aa16.34■□□□□ 0.21
PABPC1-208ENST00000519004 SOX12O15370 315 aa16.34■□□□□ 0.21
PABPC1-208ENST00000519004 RBM6P78332 1123 aaKnown RBP16.34■□□□□ 0.21
PABPC1-208ENST00000519004 USP48Q86UV5 1035 aa16.34■□□□□ 0.21
PABPC1-208ENST00000519004 SPC24Q8NBT2 197 aa16.34■□□□□ 0.21
PABPC1-208ENST00000519004 C16orf45Q96MC5 204 aaPredicted RBP16.33■□□□□ 0.2
PABPC1-208ENST00000519004 GEMIN8Q9NWZ8 242 aaKnown RBP16.33■□□□□ 0.2
PABPC1-208ENST00000519004 PLCB2Q00722 1185 aa16.33■□□□□ 0.2
PABPC1-208ENST00000519004 CHMP4CQ96CF2 233 aa16.33■□□□□ 0.2
PABPC1-208ENST00000519004 CFAP44Q96MT7 982 aa16.33■□□□□ 0.2
PABPC1-208ENST00000519004 FUCA2Q9BTY2 467 aa16.33■□□□□ 0.2
PABPC1-208ENST00000519004 UNC13BO14795 1591 aa16.32■□□□□ 0.2
PABPC1-208ENST00000519004 ABCC11Q96J66 1382 aa16.32■□□□□ 0.2
PABPC1-208ENST00000519004 URB2Q14146 1524 aaKnown RBP16.32■□□□□ 0.2
PABPC1-208ENST00000519004 DISP1Q96F81 1524 aa16.32■□□□□ 0.2
PABPC1-208ENST00000519004 CCDC112Q8NEF3 446 aa16.32■□□□□ 0.2
PABPC1-208ENST00000519004 KIF1BPQ96EK5 621 aa16.32■□□□□ 0.2
PABPC1-208ENST00000519004 TMX3Q96JJ7 454 aa16.32■□□□□ 0.2
PABPC1-208ENST00000519004 ZNF518AQ6AHZ1 1483 aa16.32■□□□□ 0.2
PABPC1-208ENST00000519004 TNNT1P13805 278 aa16.31■□□□□ 0.2
PABPC1-208ENST00000519004 MX1P20591 662 aa16.31■□□□□ 0.2
PABPC1-208ENST00000519004 PLEKHM2Q8IWE5 1019 aa16.31■□□□□ 0.2
PABPC1-208ENST00000519004 SIRT2Q8IXJ6 389 aa16.31■□□□□ 0.2
PABPC1-208ENST00000519004 C1orf115Q9H7X2 142 aa16.31■□□□□ 0.2
PABPC1-208ENST00000519004 PAXBP1Q9Y5B6 917 aa16.31■□□□□ 0.2
PABPC1-208ENST00000519004 ATP10AO60312 1499 aa16.31■□□□□ 0.2
PABPC1-208ENST00000519004 TTC37Q6PGP7 1564 aa16.31■□□□□ 0.2
PABPC1-208ENST00000519004 GOLGA6L6A8MZA4 724 aa16.31■□□□□ 0.2
PABPC1-208ENST00000519004 PTGS1P23219 599 aa16.31■□□□□ 0.2
PABPC1-208ENST00000519004 IPO8O15397 1037 aaKnown RBP16.3■□□□□ 0.2
PABPC1-208ENST00000519004 TTC22Q5TAA0 569 aa16.3■□□□□ 0.2
PABPC1-208ENST00000519004 INTS3Q68E01 1043 aaKnown RBP16.3■□□□□ 0.2
PABPC1-208ENST00000519004 ADGRL1O94910 1474 aa16.3■□□□□ 0.2
PABPC1-208ENST00000519004 ERVK-7P63135 1459 aa16.3■□□□□ 0.2
PABPC1-208ENST00000519004 ZBTB7BO15156 539 aaPredicted RBP16.3■□□□□ 0.2
PABPC1-208ENST00000519004 NOP2P46087 812 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms