RNA–Protein interactions for RNA: ENST00000518560.1

TTC1-202, Transcript of tetratricopeptide repeat domain 1, humanhuman

TSL 5

Gene TTC1, Length 543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-202ENST00000518560 ADAMTS2O95450 1211 aa14.16□□□□□ -0.14
TTC1-202ENST00000518560 DHX57Q6P158 1386 aaKnown RBP14.16□□□□□ -0.14
TTC1-202ENST00000518560 DLC1Q96QB1 1528 aa14.15□□□□□ -0.14
TTC1-202ENST00000518560 FOXO3O43524 673 aa14.15□□□□□ -0.14
TTC1-202ENST00000518560 ZNF772Q68DY9 489 aaPredicted RBP14.15□□□□□ -0.14
TTC1-202ENST00000518560 ADGRB2O60241 1585 aa14.14□□□□□ -0.15
TTC1-202ENST00000518560 DCAF11Q8TEB1 546 aa14.14□□□□□ -0.15
TTC1-202ENST00000518560 PRAM1Q96QH2 718 aa14.14□□□□□ -0.15
TTC1-202ENST00000518560 NPHP3Q7Z494 1330 aa14.14□□□□□ -0.15
TTC1-202ENST00000518560 ABCA3Q99758 1704 aa14.13□□□□□ -0.15
TTC1-202ENST00000518560 RIOK3O14730 519 aaKnown RBP14.13□□□□□ -0.15
TTC1-202ENST00000518560 ANKRD13DQ6ZTN6 518 aa14.13□□□□□ -0.15
TTC1-202ENST00000518560 ARSIQ5FYB1 569 aa14.12□□□□□ -0.15
TTC1-202ENST00000518560 TRAK1Q9UPV9 953 aa14.12□□□□□ -0.15
TTC1-202ENST00000518560 RGS12O14924 1447 aa14.11□□□□□ -0.15
TTC1-202ENST00000518560 HRCP23327 699 aa14.1□□□□□ -0.15
TTC1-202ENST00000518560 HIRIP3Q9BW71 556 aaPredicted RBP14.1□□□□□ -0.15
TTC1-202ENST00000518560 PHF8Q9UPP1 1060 aa14.1□□□□□ -0.15
TTC1-202ENST00000518560 MINK1Q8N4C8 1332 aaPredicted RBP14.1□□□□□ -0.15
TTC1-202ENST00000518560 TRPM3Q9HCF6 1732 aaPredicted RBP14.1□□□□□ -0.15
TTC1-202ENST00000518560 RXRBP28702 533 aa14.09□□□□□ -0.15
TTC1-202ENST00000518560 SIRT1Q96EB6 747 aa14.09□□□□□ -0.15
TTC1-202ENST00000518560 NGLY1Q96IV0 654 aa14.09□□□□□ -0.15
TTC1-202ENST00000518560 MS4A4AQ96JQ5 239 aa14.09□□□□□ -0.15
TTC1-202ENST00000518560 POGKQ9P215 609 aa14.09□□□□□ -0.15
TTC1-202ENST00000518560 CDK12Q9NYV4 1490 aaPredicted RBP14.08□□□□□ -0.16
TTC1-202ENST00000518560 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.08□□□□□ -0.16
TTC1-202ENST00000518560 ZFP91Q96JP5 570 aaPredicted RBP14.08□□□□□ -0.16
TTC1-202ENST00000518560 PLCH1Q4KWH8 1693 aa14.07□□□□□ -0.16
TTC1-202ENST00000518560 KIAA1210Q9ULL0 1709 aa14.07□□□□□ -0.16
TTC1-202ENST00000518560 TULP4Q9NRJ4 1543 aa14.07□□□□□ -0.16
TTC1-202ENST00000518560 QTRT2Q9H974 415 aaKnown RBP14.07□□□□□ -0.16
TTC1-202ENST00000518560 KRT28Q7Z3Y7 464 aa14.06□□□□□ -0.16
TTC1-202ENST00000518560 PMFBP1Q8TBY8 1022 aa14.06□□□□□ -0.16
TTC1-202ENST00000518560 ALS2Q96Q42 1657 aa14.06□□□□□ -0.16
TTC1-202ENST00000518560 SPATA31A3Q5VYP0 1347 aa14.06□□□□□ -0.16
TTC1-202ENST00000518560 PRR36Q9H6K5 1346 aa14.06□□□□□ -0.16
TTC1-202ENST00000518560 ITSN1Q15811 1721 aa14.06□□□□□ -0.16
TTC1-202ENST00000518560 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.06□□□□□ -0.16
TTC1-202ENST00000518560 TNS3Q68CZ2 1445 aa14.06□□□□□ -0.16
TTC1-202ENST00000518560 ANKARQ7Z5J8 1434 aa14.06□□□□□ -0.16
TTC1-202ENST00000518560 ZNF316A6NFI3 1004 aaPredicted RBP14.05□□□□□ -0.16
TTC1-202ENST00000518560 USP21Q9UK80 565 aa14.05□□□□□ -0.16
TTC1-202ENST00000518560 CRYBG1Q9Y4K1 1723 aa14.04□□□□□ -0.16
TTC1-202ENST00000518560 ATRNO75882 1429 aa14.04□□□□□ -0.16
TTC1-202ENST00000518560 BCL9LQ86UU0 1499 aa14.04□□□□□ -0.16
TTC1-202ENST00000518560 TOPAZ1Q8N9V7 1692 aa14.04□□□□□ -0.16
TTC1-202ENST00000518560 RBM6P78332 1123 aaKnown RBP14.03□□□□□ -0.16
TTC1-202ENST00000518560 CABLES1Q8TDN4 633 aa14.03□□□□□ -0.16
TTC1-202ENST00000518560 UPF1Q92900 1129 aaKnown RBP eCLIP14.03□□□□□ -0.162e-9■■■■■ 28.4
TTC1-202ENST00000518560 GLI3P10071 1580 aa14.02□□□□□ -0.16
TTC1-202ENST00000518560 ATP7BP35670 1465 aa14.02□□□□□ -0.16
TTC1-202ENST00000518560 NLRP6P59044 892 aa14.02□□□□□ -0.17
TTC1-202ENST00000518560 FNBP4Q8N3X1 1017 aaPredicted RBP14.02□□□□□ -0.17
TTC1-202ENST00000518560 QRICH2Q9H0J4 1663 aa14.01□□□□□ -0.17
TTC1-202ENST00000518560 LMOD2Q6P5Q4 547 aa14.01□□□□□ -0.17
TTC1-202ENST00000518560 BRWD3Q6RI45 1802 aa14.01□□□□□ -0.17
TTC1-202ENST00000518560 SLIT2O94813 1529 aa14□□□□□ -0.17
TTC1-202ENST00000518560 WASLO00401 505 aaPredicted RBP14□□□□□ -0.17
TTC1-202ENST00000518560 LSM11P83369 360 aaKnown RBP eCLIP14□□□□□ -0.17
TTC1-202ENST00000518560 NBPF1Q3BBV0 1214 aa14□□□□□ -0.17
TTC1-202ENST00000518560 KHSRPQ92945 711 aaKnown RBP eCLIP14□□□□□ -0.17
TTC1-202ENST00000518560 TRPC5Q9UL62 973 aaPredicted RBP14□□□□□ -0.17
TTC1-202ENST00000518560 TRPM1Q7Z4N2 1603 aa14□□□□□ -0.17
TTC1-202ENST00000518560 SBNO1A3KN83 1393 aa13.99□□□□□ -0.17
TTC1-202ENST00000518560 NRAPQ86VF7 1730 aa13.99□□□□□ -0.17
TTC1-202ENST00000518560 NWD2Q9ULI1 1742 aa13.99□□□□□ -0.17
TTC1-202ENST00000518560 PSME1Q06323 249 aa13.99□□□□□ -0.17
TTC1-202ENST00000518560 RNF25Q96BH1 459 aaPredicted RBP13.99□□□□□ -0.17
TTC1-202ENST00000518560 SIN3AQ96ST3 1273 aa13.99□□□□□ -0.17
TTC1-202ENST00000518560 EIF3AQ14152 1382 aaKnown RBP13.97□□□□□ -0.17
TTC1-202ENST00000518560 PHRF1Q9P1Y6 1649 aaKnown RBP13.97□□□□□ -0.17
TTC1-202ENST00000518560 HAP1P54257 671 aaPredicted RBP13.97□□□□□ -0.17
TTC1-202ENST00000518560 STAC3Q96MF2 364 aa13.97□□□□□ -0.17
TTC1-202ENST00000518560 TAOK2Q9UL54 1235 aa13.97□□□□□ -0.17
TTC1-202ENST00000518560 RALGAPBQ86X10 1494 aa13.97□□□□□ -0.17
TTC1-202ENST00000518560 ARHGEF10O15013 1369 aa13.96□□□□□ -0.17
TTC1-202ENST00000518560 L3MBTL2Q969R5 705 aa13.95□□□□□ -0.18
TTC1-202ENST00000518560 GPRASP1Q5JY77 1395 aa13.95□□□□□ -0.18
TTC1-202ENST00000518560 COL14A1Q05707 1796 aaKnown RBP13.94□□□□□ -0.18
TTC1-202ENST00000518560 NUDT16Q96DE0 195 aaKnown RBP13.94□□□□□ -0.18
TTC1-202ENST00000518560 CDK19Q9BWU1 502 aa13.94□□□□□ -0.18
TTC1-202ENST00000518560 PBX2P40425 430 aa13.93□□□□□ -0.18
TTC1-202ENST00000518560 NEUROD1Q13562 356 aa13.93□□□□□ -0.18
TTC1-202ENST00000518560 UNC5CLQ8IV45 518 aa13.93□□□□□ -0.18
TTC1-202ENST00000518560 NGDNQ8NEJ9 315 aaKnown RBP13.93□□□□□ -0.18
TTC1-202ENST00000518560 GJD4Q96KN9 370 aaPredicted RBP13.93□□□□□ -0.18
TTC1-202ENST00000518560 ATAD2Q6PL18 1390 aa13.92□□□□□ -0.18
TTC1-202ENST00000518560 FAM83GA6ND36 823 aa13.91□□□□□ -0.18
TTC1-202ENST00000518560 CENPJQ9HC77 1338 aaPredicted RBP13.9□□□□□ -0.18
TTC1-202ENST00000518560 NUTM2GQ5VZR2 741 aa13.9□□□□□ -0.18
TTC1-202ENST00000518560 BCL11BQ9C0K0 894 aaPredicted RBP13.9□□□□□ -0.18
TTC1-202ENST00000518560 NRKQ7Z2Y5 1582 aa13.9□□□□□ -0.18
TTC1-202ENST00000518560 ACEP12821 1306 aa13.9□□□□□ -0.19
TTC1-202ENST00000518560 NUDT7P0C024 238 aa13.89□□□□□ -0.19
TTC1-202ENST00000518560 CCDC9Q9Y3X0 531 aaKnown RBP13.89□□□□□ -0.19
TTC1-202ENST00000518560 PPIP5K1Q6PFW1 1433 aa13.89□□□□□ -0.19
TTC1-202ENST00000518560 POLR3AO14802 1390 aaPredicted RBP13.88□□□□□ -0.19
TTC1-202ENST00000518560 FBXO22Q8NEZ5 403 aa13.88□□□□□ -0.19
TTC1-202ENST00000518560 SRPK2P78362 688 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms