RNA–Protein interactions for RNA: ENST00000518537.5

PCM1-206, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-206ENST00000518537 TSR2Q969E8 191 aaKnown RBP21.5■■□□□ 1.03
PCM1-206ENST00000518537 MARF1Q9Y4F3 1742 aaKnown RBP21.5■■□□□ 1.03
PCM1-206ENST00000518537 FLT4P35916 1363 aa21.5■■□□□ 1.03
PCM1-206ENST00000518537 CANXP27824 592 aaKnown RBP21.5■■□□□ 1.03
PCM1-206ENST00000518537 AMPHP49418 695 aa21.5■■□□□ 1.03
PCM1-206ENST00000518537 PSME1Q06323 249 aa21.5■■□□□ 1.03
PCM1-206ENST00000518537 SULT6B1Q6IMI4 303 aa21.48■■□□□ 1.03
PCM1-206ENST00000518537 CT47B1P0C2W7 299 aaPredicted RBP21.48■■□□□ 1.03
PCM1-206ENST00000518537 RGPD1P0DJD0 1748 aa21.47■■□□□ 1.03
PCM1-206ENST00000518537 CALD1Q05682 793 aaKnown RBP21.47■■□□□ 1.03
PCM1-206ENST00000518537 EXOSC9Q06265 439 aaKnown RBP21.47■■□□□ 1.03
PCM1-206ENST00000518537 LMOD3Q0VAK6 560 aa21.47■■□□□ 1.03
PCM1-206ENST00000518537 AEBP1Q8IUX7 1158 aa21.46■■□□□ 1.03
PCM1-206ENST00000518537 DLG5Q8TDM6 1919 aa21.46■■□□□ 1.03
PCM1-206ENST00000518537 HSPA2P54652 639 aa21.45■■□□□ 1.02
PCM1-206ENST00000518537 PDE3AQ14432 1141 aa21.45■■□□□ 1.02
PCM1-206ENST00000518537 ARHGEF10O15013 1369 aa21.44■■□□□ 1.02
PCM1-206ENST00000518537 FRAT1Q92837 279 aaPredicted RBP21.44■■□□□ 1.02
PCM1-206ENST00000518537 ORAI2Q96SN7 254 aa21.44■■□□□ 1.02
PCM1-206ENST00000518537 C19orf44Q9H6X5 657 aa21.44■■□□□ 1.02
PCM1-206ENST00000518537 KIF24Q5T7B8 1368 aa21.44■■□□□ 1.02
PCM1-206ENST00000518537 LAS1LQ9Y4W2 734 aaKnown RBP21.43■■□□□ 1.02
PCM1-206ENST00000518537 STRCP1A6NGW2 1772 aa21.42■■□□□ 1.02
PCM1-206ENST00000518537 BCL2L13Q9BXK5 485 aa21.41■■□□□ 1.02
PCM1-206ENST00000518537 THUMPD2Q9BTF0 503 aaKnown RBP21.41■■□□□ 1.02
PCM1-206ENST00000518537 FOXO3O43524 673 aa21.4■■□□□ 1.02
PCM1-206ENST00000518537 HOXC9P31274 260 aa21.4■■□□□ 1.02
PCM1-206ENST00000518537 KIF1AQ12756 1690 aa21.4■■□□□ 1.02
PCM1-206ENST00000518537 C1orf167Q5SNV9 1468 aa21.4■■□□□ 1.02
PCM1-206ENST00000518537 KDM4FA0A1W2PPD8 638 aa21.4■■□□□ 1.02
PCM1-206ENST00000518537 GNAI1P63096 354 aa21.4■■□□□ 1.02
PCM1-206ENST00000518537 TMEM94Q12767 1356 aa21.4■■□□□ 1.02
PCM1-206ENST00000518537 IFT57Q9NWB7 429 aa21.39■■□□□ 1.01
PCM1-206ENST00000518537 ATF3P18847 181 aa21.38■■□□□ 1.01
PCM1-206ENST00000518537 PANK1Q8TE04 598 aa21.38■■□□□ 1.01
PCM1-206ENST00000518537 LTN1O94822 1766 aa21.38■■□□□ 1.01
PCM1-206ENST00000518537 NCOA3Q9Y6Q9 1424 aa21.37■■□□□ 1.01
PCM1-206ENST00000518537 RTL1A6NKG5 1358 aa21.37■■□□□ 1.01
PCM1-206ENST00000518537 EYA1Q99502 592 aa21.37■■□□□ 1.01
PCM1-206ENST00000518537 SMC4Q9NTJ3 1288 aa21.37■■□□□ 1.01
PCM1-206ENST00000518537 IGSF1Q8N6C5 1336 aa21.37■■□□□ 1.01
PCM1-206ENST00000518537 XPCQ01831 940 aaPredicted RBP21.37■■□□□ 1.01
PCM1-206ENST00000518537 KCNH5Q8NCM2 988 aa21.37■■□□□ 1.01
PCM1-206ENST00000518537 FAM83GA6ND36 823 aa21.36■■□□□ 1.01
PCM1-206ENST00000518537 COG6Q9Y2V7 657 aa21.36■■□□□ 1.01
PCM1-206ENST00000518537 NFAT5O94916 1531 aa21.35■■□□□ 1.01
PCM1-206ENST00000518537 ZNF853P0CG23 659 aa21.35■■□□□ 1.01
PCM1-206ENST00000518537 KRT28Q7Z3Y7 464 aa21.35■■□□□ 1.01
PCM1-206ENST00000518537 RBM19Q9Y4C8 960 aaKnown RBP21.35■■□□□ 1.01
PCM1-206ENST00000518537 DCCP43146 1447 aa21.35■■□□□ 1.01
PCM1-206ENST00000518537 KDRP35968 1356 aa21.35■■□□□ 1.01
PCM1-206ENST00000518537 ZKSCAN2Q63HK3 967 aa21.34■■□□□ 1.01
PCM1-206ENST00000518537 LMTK3Q96Q04 1460 aa21.34■■□□□ 1.01
PCM1-206ENST00000518537 DCTN1Q14203 1278 aa21.34■■□□□ 1.01
PCM1-206ENST00000518537 SSH1Q8WYL5 1049 aa21.34■■□□□ 1.01
PCM1-206ENST00000518537 CFAP44Q96MT7 982 aa21.34■■□□□ 1.01
PCM1-206ENST00000518537 TRPM3Q9HCF6 1732 aaPredicted RBP21.33■■□□□ 1.01
PCM1-206ENST00000518537 LTV1Q96GA3 475 aaPredicted RBP21.33■■□□□ 1.01
PCM1-206ENST00000518537 MST1RQ04912 1400 aa21.33■■□□□ 1.01
PCM1-206ENST00000518537 MS4A1P11836 297 aa21.33■■□□□ 1
PCM1-206ENST00000518537 LMOD2Q6P5Q4 547 aa21.33■■□□□ 1
PCM1-206ENST00000518537 IP6K1Q92551 441 aa21.33■■□□□ 1
PCM1-206ENST00000518537 MBIPQ9NS73 344 aa21.33■■□□□ 1
PCM1-206ENST00000518537 ALDH1L2Q3SY69 923 aa21.31■■□□□ 1
PCM1-206ENST00000518537 CENPQQ7L2Z9 268 aaPredicted RBP21.31■■□□□ 1
PCM1-206ENST00000518537 TNNQ9UQP3 1299 aa21.31■■□□□ 1
PCM1-206ENST00000518537 ZBTB7CA1YPR0 619 aa21.31■■□□□ 1
PCM1-206ENST00000518537 ZNF428Q96B54 188 aa21.31■■□□□ 1
PCM1-206ENST00000518537 CLUAP1Q96AJ1 413 aa21.3■■□□□ 1
PCM1-206ENST00000518537 STRCQ7RTU9 1775 aa21.3■■□□□ 1
PCM1-206ENST00000518537 KDM2BQ8NHM5 1336 aa21.3■■□□□ 1
PCM1-206ENST00000518537 RLBP1P12271 317 aa21.3■■□□□ 1
PCM1-206ENST00000518537 MTHFSDQ2M296 383 aaKnown RBP21.3■■□□□ 1
PCM1-206ENST00000518537 CADPS2Q86UW7 1296 aa21.3■■□□□ 1
PCM1-206ENST00000518537 SLIT3O75094 1523 aa21.3■■□□□ 1
PCM1-206ENST00000518537 FTSJ3Q8IY81 847 aaKnown RBP21.29■■□□□ 1
PCM1-206ENST00000518537 GAS2L2Q8NHY3 880 aa21.29■■□□□ 1
PCM1-206ENST00000518537 MSH6P52701 1360 aa21.29■■□□□ 1
PCM1-206ENST00000518537 AAMPQ13685 434 aa21.29■■□□□ 1
PCM1-206ENST00000518537 MCM10Q7L590 875 aa21.29■■□□□ 1
PCM1-206ENST00000518537 DZIP1LQ8IYY4 767 aaKnown RBP21.29■■□□□ 1
PCM1-206ENST00000518537 GCP02774 474 aa21.28■■□□□ 1
PCM1-206ENST00000518537 KIF16BQ96L93 1317 aa21.28■■□□□ 1
PCM1-206ENST00000518537 PHRF1Q9P1Y6 1649 aaKnown RBP21.28■■□□□ 1
PCM1-206ENST00000518537 VAMP4O75379 141 aa21.27■■□□□ 1
PCM1-206ENST00000518537 PLEKHG5O94827 1062 aa21.27■■□□□ 1
PCM1-206ENST00000518537 RTF1Q92541 710 aaKnown RBP21.27■■□□□ 1
PCM1-206ENST00000518537 NOB1Q9ULX3 412 aaKnown RBP21.27■■□□□ 1
PCM1-206ENST00000518537 IPO8O15397 1037 aaKnown RBP21.27■■□□□ 1
PCM1-206ENST00000518537 TCERG1O14776 1098 aaKnown RBP21.26■□□□□ 0.99
PCM1-206ENST00000518537 USP19O94966 1318 aa21.26■□□□□ 0.99
PCM1-206ENST00000518537 ATF7IPQ6VMQ6 1270 aa21.26■□□□□ 0.99
PCM1-206ENST00000518537 TSPYL6Q8N831 410 aa21.26■□□□□ 0.99
PCM1-206ENST00000518537 MVPQ14764 893 aaKnown RBP21.25■□□□□ 0.99
PCM1-206ENST00000518537 TWISTNBQ3B726 338 aaPredicted RBP21.25■□□□□ 0.99
PCM1-206ENST00000518537 ALS2Q96Q42 1657 aa21.24■□□□□ 0.99
PCM1-206ENST00000518537 TRIM27P14373 513 aa21.24■□□□□ 0.99
PCM1-206ENST00000518537 XIRP1Q702N8 1843 aaKnown RBP21.24■□□□□ 0.99
PCM1-206ENST00000518537 ELL2O00472 640 aaPredicted RBP21.24■□□□□ 0.99
PCM1-206ENST00000518537 ARHGEF25Q86VW2 580 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms