RNA–Protein interactions for RNA: ENST00000518290.1

ARFGEF1-204, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 3,179 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-204ENST00000518290 PARP4Q9UKK3 1724 aaKnown RBP10.48□□□□□ -0.73
ARFGEF1-204ENST00000518290 NCKAP5LQ9HCH0 1330 aa10.47□□□□□ -0.73
ARFGEF1-204ENST00000518290 OVOS2A0A0G2JMS6 1433 aa10.47□□□□□ -0.73
ARFGEF1-204ENST00000518290 PLPPR3Q6T4P5 718 aa10.47□□□□□ -0.73
ARFGEF1-204ENST00000518290 PKD1L3Q7Z443 1732 aa10.47□□□□□ -0.73
ARFGEF1-204ENST00000518290 RARSP54136 660 aaKnown RBP10.47□□□□□ -0.73
ARFGEF1-204ENST00000518290 NHSL1Q5SYE7 1610 aa10.46□□□□□ -0.73
ARFGEF1-204ENST00000518290 RGPD2P0DJD1 1756 aa10.46□□□□□ -0.73
ARFGEF1-204ENST00000518290 U2AF1L5P0DN76 240 aaPredicted RBP10.46□□□□□ -0.73
ARFGEF1-204ENST00000518290 U2AF1Q01081 240 aaKnown RBP eCLIP10.46□□□□□ -0.73
ARFGEF1-204ENST00000518290 NFE2L2Q16236 605 aa10.46□□□□□ -0.73
ARFGEF1-204ENST00000518290 USP19O94966 1318 aa10.46□□□□□ -0.73
ARFGEF1-204ENST00000518290 EXOC6Q8TAG9 804 aa10.46□□□□□ -0.74
ARFGEF1-204ENST00000518290 IGSF1Q8N6C5 1336 aa10.46□□□□□ -0.74
ARFGEF1-204ENST00000518290 FANCIQ9NVI1 1328 aa10.46□□□□□ -0.74
ARFGEF1-204ENST00000518290 C1orf167Q5SNV9 1468 aa10.46□□□□□ -0.74
ARFGEF1-204ENST00000518290 IRX6P78412 446 aaPredicted RBP10.45□□□□□ -0.74
ARFGEF1-204ENST00000518290 BCANQ96GW7 911 aa10.45□□□□□ -0.74
ARFGEF1-204ENST00000518290 CRB1P82279 1406 aa10.45□□□□□ -0.74
ARFGEF1-204ENST00000518290 EMILIN1Q9Y6C2 1016 aa10.45□□□□□ -0.74
ARFGEF1-204ENST00000518290 PXDNQ92626 1479 aa10.44□□□□□ -0.74
ARFGEF1-204ENST00000518290 ALDH1L2Q3SY69 923 aa10.44□□□□□ -0.74
ARFGEF1-204ENST00000518290 TNNT2P45379 298 aaPredicted RBP10.44□□□□□ -0.74
ARFGEF1-204ENST00000518290 CALD1Q05682 793 aaKnown RBP10.44□□□□□ -0.74
ARFGEF1-204ENST00000518290 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.44□□□□□ -0.74
ARFGEF1-204ENST00000518290 IFT57Q9NWB7 429 aa10.44□□□□□ -0.74
ARFGEF1-204ENST00000518290 MS4A1P11836 297 aa10.43□□□□□ -0.74
ARFGEF1-204ENST00000518290 ZRANB1Q9UGI0 708 aa10.43□□□□□ -0.74
ARFGEF1-204ENST00000518290 KIAA0232Q92628 1395 aa10.43□□□□□ -0.74
ARFGEF1-204ENST00000518290 EIF4A2Q14240 407 aaKnown RBP10.43□□□□□ -0.74
ARFGEF1-204ENST00000518290 CRBNQ96SW2 442 aa10.43□□□□□ -0.74
ARFGEF1-204ENST00000518290 MAPK8IP3Q9UPT6 1336 aa10.43□□□□□ -0.74
ARFGEF1-204ENST00000518290 LMOD3Q0VAK6 560 aa10.42□□□□□ -0.74
ARFGEF1-204ENST00000518290 B4GALNT3Q6L9W6 998 aa10.42□□□□□ -0.74
ARFGEF1-204ENST00000518290 RGPD5Q99666 1765 aa10.42□□□□□ -0.74
ARFGEF1-204ENST00000518290 MAP3K19Q56UN5 1328 aa10.41□□□□□ -0.74
ARFGEF1-204ENST00000518290 C20orf194Q5TEA3 1177 aa10.41□□□□□ -0.74
ARFGEF1-204ENST00000518290 HTATSF1O43719 755 aaKnown RBP10.41□□□□□ -0.74
ARFGEF1-204ENST00000518290 CENPQQ7L2Z9 268 aaPredicted RBP10.41□□□□□ -0.74
ARFGEF1-204ENST00000518290 CCDC136Q96JN2 1154 aa10.41□□□□□ -0.74
ARFGEF1-204ENST00000518290 PRKAR2BP31323 418 aa10.4□□□□□ -0.74
ARFGEF1-204ENST00000518290 SCN11AQ9UI33 1791 aa10.4□□□□□ -0.74
ARFGEF1-204ENST00000518290 SOS1Q07889 1333 aaPredicted RBP10.4□□□□□ -0.74
ARFGEF1-204ENST00000518290 COL22A1Q8NFW1 1626 aaPredicted RBP10.4□□□□□ -0.74
ARFGEF1-204ENST00000518290 ARHGAP45Q92619 1136 aa10.4□□□□□ -0.75
ARFGEF1-204ENST00000518290 SALL2Q9Y467 1007 aaPredicted RBP10.4□□□□□ -0.75
ARFGEF1-204ENST00000518290 TCERG1O14776 1098 aaKnown RBP10.39□□□□□ -0.75
ARFGEF1-204ENST00000518290 PHACTR3Q96KR7 559 aa10.39□□□□□ -0.75
ARFGEF1-204ENST00000518290 BABAM1Q9NWV8 329 aa10.39□□□□□ -0.75
ARFGEF1-204ENST00000518290 PHF8Q9UPP1 1060 aa10.39□□□□□ -0.75
ARFGEF1-204ENST00000518290 RIPK4P57078 832 aa10.39□□□□□ -0.75
ARFGEF1-204ENST00000518290 PAPPAQ13219 1627 aa10.39□□□□□ -0.75
ARFGEF1-204ENST00000518290 MRC1P22897 1456 aa10.39□□□□□ -0.75
ARFGEF1-204ENST00000518290 BCAR3O75815 825 aa10.38□□□□□ -0.75
ARFGEF1-204ENST00000518290 MSH6P52701 1360 aa10.38□□□□□ -0.75
ARFGEF1-204ENST00000518290 ERICH6Q7L0X2 663 aa10.38□□□□□ -0.75
ARFGEF1-204ENST00000518290 CFAP44Q96MT7 982 aa10.38□□□□□ -0.75
ARFGEF1-204ENST00000518290 RGS12O14924 1447 aa10.38□□□□□ -0.75
ARFGEF1-204ENST00000518290 PLCH1Q4KWH8 1693 aa10.38□□□□□ -0.75
ARFGEF1-204ENST00000518290 WNK3Q9BYP7 1800 aa10.38□□□□□ -0.75
ARFGEF1-204ENST00000518290 U2SURPO15042 1029 aaKnown RBP10.38□□□□□ -0.75
ARFGEF1-204ENST00000518290 SHANK3Q9BYB0 1731 aa10.37□□□□□ -0.75
ARFGEF1-204ENST00000518290 PLIN1O60240 522 aa10.37□□□□□ -0.75
ARFGEF1-204ENST00000518290 GNAI1P63096 354 aa10.37□□□□□ -0.75
ARFGEF1-204ENST00000518290 RRP7AQ9Y3A4 280 aaKnown RBP10.37□□□□□ -0.75
ARFGEF1-204ENST00000518290 RBM19Q9Y4C8 960 aaKnown RBP10.37□□□□□ -0.75
ARFGEF1-204ENST00000518290 PXDNLA1KZ92 1463 aa10.37□□□□□ -0.75
ARFGEF1-204ENST00000518290 KIF16BQ96L93 1317 aa10.37□□□□□ -0.75
ARFGEF1-204ENST00000518290 HOXC9P31274 260 aa10.37□□□□□ -0.75
ARFGEF1-204ENST00000518290 RRS1Q15050 365 aaKnown RBP10.37□□□□□ -0.75
ARFGEF1-204ENST00000518290 CEMIPQ8WUJ3 1361 aa10.37□□□□□ -0.75
ARFGEF1-204ENST00000518290 TUBGCP6Q96RT7 1819 aa10.36□□□□□ -0.75
ARFGEF1-204ENST00000518290 GLI3P10071 1580 aa10.36□□□□□ -0.75
ARFGEF1-204ENST00000518290 IBTKQ9P2D0 1353 aaPredicted RBP10.36□□□□□ -0.75
ARFGEF1-204ENST00000518290 CHL1O00533 1208 aa10.35□□□□□ -0.75
ARFGEF1-204ENST00000518290 KCNH5Q8NCM2 988 aa10.35□□□□□ -0.75
ARFGEF1-204ENST00000518290 SENP3Q9H4L4 574 aaPredicted RBP10.35□□□□□ -0.75
ARFGEF1-204ENST00000518290 ABCC4O15439 1325 aa10.35□□□□□ -0.75
ARFGEF1-204ENST00000518290 LAMB4A4D0S4 1761 aa10.35□□□□□ -0.75
ARFGEF1-204ENST00000518290 UBR2Q8IWV8 1755 aa10.35□□□□□ -0.75
ARFGEF1-204ENST00000518290 CPDO75976 1380 aa10.35□□□□□ -0.75
ARFGEF1-204ENST00000518290 TNS3Q68CZ2 1445 aa10.35□□□□□ -0.75
ARFGEF1-204ENST00000518290 SENP3-EIF4A1A0A087X0R7 540 aa10.34□□□□□ -0.75
ARFGEF1-204ENST00000518290 FBLN1P23142 703 aa10.34□□□□□ -0.75
ARFGEF1-204ENST00000518290 NGDNQ8NEJ9 315 aaKnown RBP10.34□□□□□ -0.75
ARFGEF1-204ENST00000518290 IP6K1Q92551 441 aa10.34□□□□□ -0.75
ARFGEF1-204ENST00000518290 C19orf44Q9H6X5 657 aa10.34□□□□□ -0.75
ARFGEF1-204ENST00000518290 VAMP4O75379 141 aa10.34□□□□□ -0.75
ARFGEF1-204ENST00000518290 EXOSC9Q06265 439 aaKnown RBP10.34□□□□□ -0.75
ARFGEF1-204ENST00000518290 MVPQ14764 893 aaKnown RBP10.34□□□□□ -0.75
ARFGEF1-204ENST00000518290 CLUAP1Q96AJ1 413 aa10.34□□□□□ -0.75
ARFGEF1-204ENST00000518290 HSP90AB2PQ58FF8 381 aa10.34□□□□□ -0.75
ARFGEF1-204ENST00000518290 ZKSCAN2Q63HK3 967 aa10.33□□□□□ -0.76
ARFGEF1-204ENST00000518290 AHDC1Q5TGY3 1603 aaPredicted RBP10.33□□□□□ -0.76
ARFGEF1-204ENST00000518290 MRPL50Q8N5N7 158 aaKnown RBP10.33□□□□□ -0.76
ARFGEF1-204ENST00000518290 PMFBP1Q8TBY8 1022 aa10.33□□□□□ -0.76
ARFGEF1-204ENST00000518290 NEFMP07197 916 aa10.32□□□□□ -0.76
ARFGEF1-204ENST00000518290 HDAC1Q13547 482 aaPredicted RBP10.32□□□□□ -0.76
ARFGEF1-204ENST00000518290 MBIPQ9NS73 344 aa10.32□□□□□ -0.76
ARFGEF1-204ENST00000518290 TMEM94Q12767 1356 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms