RNA–Protein interactions for RNA: ENST00000518265.5

SRGAP3-211, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 1,799 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-211ENST00000518265 PLEKHG3A1L390 1219 aa10.91□□□□□ -0.66
SRGAP3-211ENST00000518265 DDX27Q96GQ7 796 aaKnown RBP10.91□□□□□ -0.66
SRGAP3-211ENST00000518265 CRISPLD2Q9H0B8 497 aa10.91□□□□□ -0.66
SRGAP3-211ENST00000518265 CABP1Q9NZU7 370 aa10.91□□□□□ -0.66
SRGAP3-211ENST00000518265 TMEM94Q12767 1356 aa10.91□□□□□ -0.66
SRGAP3-211ENST00000518265 KIF20BQ96Q89 1820 aa10.9□□□□□ -0.66
SRGAP3-211ENST00000518265 NUDT16Q96DE0 195 aaKnown RBP10.9□□□□□ -0.66
SRGAP3-211ENST00000518265 SIRT1Q96EB6 747 aa10.9□□□□□ -0.66
SRGAP3-211ENST00000518265 CHMP4AQ9BY43 222 aa10.9□□□□□ -0.66
SRGAP3-211ENST00000518265 ATP7BP35670 1465 aa10.9□□□□□ -0.66
SRGAP3-211ENST00000518265 PPIP5K1Q6PFW1 1433 aa10.9□□□□□ -0.66
SRGAP3-211ENST00000518265 NKTRP30414 1462 aaKnown RBP10.9□□□□□ -0.67
SRGAP3-211ENST00000518265 CAMK2BQ13554 666 aa10.9□□□□□ -0.67
SRGAP3-211ENST00000518265 CC2D1BQ5T0F9 858 aaKnown RBP10.9□□□□□ -0.67
SRGAP3-211ENST00000518265 PMFBP1Q8TBY8 1022 aa10.9□□□□□ -0.67
SRGAP3-211ENST00000518265 CARD14Q9BXL6 1004 aa10.9□□□□□ -0.67
SRGAP3-211ENST00000518265 CD163L1Q9NR16 1453 aa10.89□□□□□ -0.67
SRGAP3-211ENST00000518265 PDE4AP27815 886 aa10.89□□□□□ -0.67
SRGAP3-211ENST00000518265 CDCA8Q53HL2 280 aa10.89□□□□□ -0.67
SRGAP3-211ENST00000518265 MON2Q7Z3U7 1717 aa10.89□□□□□ -0.67
SRGAP3-211ENST00000518265 LRRC7Q96NW7 1537 aa10.89□□□□□ -0.67
SRGAP3-211ENST00000518265 ADGRL3Q9HAR2 1447 aa10.89□□□□□ -0.67
SRGAP3-211ENST00000518265 CDC42BPGQ6DT37 1551 aa10.88□□□□□ -0.67
SRGAP3-211ENST00000518265 A0A1W2PP64 1363 aa10.88□□□□□ -0.67
SRGAP3-211ENST00000518265 ZNF579Q8NAF0 562 aaKnown RBP10.88□□□□□ -0.67
SRGAP3-211ENST00000518265 MS4A4AQ96JQ5 239 aa10.87□□□□□ -0.67
SRGAP3-211ENST00000518265 NSD3Q9BZ95 1437 aa10.87□□□□□ -0.67
SRGAP3-211ENST00000518265 PER1O15534 1290 aaPredicted RBP10.86□□□□□ -0.67
SRGAP3-211ENST00000518265 CCDC82Q8N4S0 544 aa10.86□□□□□ -0.67
SRGAP3-211ENST00000518265 ATAD2Q6PL18 1390 aa10.86□□□□□ -0.67
SRGAP3-211ENST00000518265 SOX12O15370 315 aa10.85□□□□□ -0.67
SRGAP3-211ENST00000518265 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.85□□□□□ -0.67
SRGAP3-211ENST00000518265 DDX17Q92841 729 aaKnown RBP10.85□□□□□ -0.67
SRGAP3-211ENST00000518265 ORAI2Q96SN7 254 aa10.85□□□□□ -0.67
SRGAP3-211ENST00000518265 CCDC61Q9Y6R9 512 aa10.85□□□□□ -0.67
SRGAP3-211ENST00000518265 ANKRD26Q9UPS8 1709 aa10.85□□□□□ -0.67
SRGAP3-211ENST00000518265 MAP2P11137 1827 aaKnown RBP10.85□□□□□ -0.67
SRGAP3-211ENST00000518265 LTBP4Q8N2S1 1624 aa10.85□□□□□ -0.67
SRGAP3-211ENST00000518265 GPR37O15354 613 aa10.85□□□□□ -0.67
SRGAP3-211ENST00000518265 ANP32CO43423 234 aa10.85□□□□□ -0.67
SRGAP3-211ENST00000518265 BRD2P25440 801 aaKnown RBP10.85□□□□□ -0.67
SRGAP3-211ENST00000518265 XPCQ01831 940 aaPredicted RBP10.85□□□□□ -0.67
SRGAP3-211ENST00000518265 CCDC184Q52MB2 194 aa10.85□□□□□ -0.67
SRGAP3-211ENST00000518265 CHADLQ6NUI6 762 aa10.85□□□□□ -0.67
SRGAP3-211ENST00000518265 IFNL1Q8IU54 200 aa10.85□□□□□ -0.67
SRGAP3-211ENST00000518265 NRKQ7Z2Y5 1582 aa10.84□□□□□ -0.67
SRGAP3-211ENST00000518265 ZBTB7CA1YPR0 619 aa10.84□□□□□ -0.67
SRGAP3-211ENST00000518265 TNNT2P45379 298 aaPredicted RBP10.84□□□□□ -0.67
SRGAP3-211ENST00000518265 ESCO1Q5FWF5 840 aa10.84□□□□□ -0.67
SRGAP3-211ENST00000518265 CLUAP1Q96AJ1 413 aa10.84□□□□□ -0.67
SRGAP3-211ENST00000518265 ZRANB1Q9UGI0 708 aa10.84□□□□□ -0.67
SRGAP3-211ENST00000518265 ACEP12821 1306 aa10.84□□□□□ -0.67
SRGAP3-211ENST00000518265 ANKRD36BQ8N2N9 1353 aa10.84□□□□□ -0.67
SRGAP3-211ENST00000518265 KNSTRNQ9Y448 316 aa10.83□□□□□ -0.68
SRGAP3-211ENST00000518265 KTN1Q86UP2 1357 aaKnown RBP10.83□□□□□ -0.68
SRGAP3-211ENST00000518265 ONECUT3O60422 494 aaPredicted RBP10.82□□□□□ -0.68
SRGAP3-211ENST00000518265 FGD1P98174 961 aa10.82□□□□□ -0.68
SRGAP3-211ENST00000518265 PRKRIP1Q9H875 184 aaPredicted RBP10.82□□□□□ -0.68
SRGAP3-211ENST00000518265 CCDC9Q9Y3X0 531 aaKnown RBP10.82□□□□□ -0.68
SRGAP3-211ENST00000518265 MARF1Q9Y4F3 1742 aaKnown RBP10.82□□□□□ -0.68
SRGAP3-211ENST00000518265 ATF3P18847 181 aa10.82□□□□□ -0.68
SRGAP3-211ENST00000518265 FBLN1P23142 703 aa10.82□□□□□ -0.68
SRGAP3-211ENST00000518265 NGDNQ8NEJ9 315 aaKnown RBP10.82□□□□□ -0.68
SRGAP3-211ENST00000518265 GGNBP2Q9H3C7 697 aa10.82□□□□□ -0.68
SRGAP3-211ENST00000518265 C19orf44Q9H6X5 657 aa10.82□□□□□ -0.68
SRGAP3-211ENST00000518265 MSH6P52701 1360 aa10.82□□□□□ -0.68
SRGAP3-211ENST00000518265 MST1RQ04912 1400 aa10.82□□□□□ -0.68
SRGAP3-211ENST00000518265 PITPNM1O00562 1244 aa10.81□□□□□ -0.68
SRGAP3-211ENST00000518265 NUTM2GQ5VZR2 741 aa10.81□□□□□ -0.68
SRGAP3-211ENST00000518265 HDGFL2Q7Z4V5 671 aaPredicted RBP10.81□□□□□ -0.68
SRGAP3-211ENST00000518265 C1orf167Q5SNV9 1468 aa10.81□□□□□ -0.68
SRGAP3-211ENST00000518265 PIK3C2AO00443 1686 aa10.81□□□□□ -0.68
SRGAP3-211ENST00000518265 NME9Q86XW9 330 aa10.8□□□□□ -0.68
SRGAP3-211ENST00000518265 PUS7Q96PZ0 661 aaKnown RBP10.8□□□□□ -0.68
SRGAP3-211ENST00000518265 TERF2IPQ9NYB0 399 aa10.8□□□□□ -0.68
SRGAP3-211ENST00000518265 CPSF1Q10570 1443 aaKnown RBP10.8□□□□□ -0.68
SRGAP3-211ENST00000518265 ANKARQ7Z5J8 1434 aa10.79□□□□□ -0.68
SRGAP3-211ENST00000518265 FOXO3O43524 673 aa10.79□□□□□ -0.68
SRGAP3-211ENST00000518265 PAK3O75914 559 aaPredicted RBP10.79□□□□□ -0.68
SRGAP3-211ENST00000518265 TRPM3Q9HCF6 1732 aaPredicted RBP10.79□□□□□ -0.68
SRGAP3-211ENST00000518265 KIF1AQ12756 1690 aa10.78□□□□□ -0.68
SRGAP3-211ENST00000518265 SENP3-EIF4A1A0A087X0R7 540 aa10.78□□□□□ -0.68
SRGAP3-211ENST00000518265 FLIIQ13045 1269 aa10.78□□□□□ -0.68
SRGAP3-211ENST00000518265 NINLQ9Y2I6 1382 aa10.78□□□□□ -0.68
SRGAP3-211ENST00000518265 ROBO1Q9Y6N7 1651 aa10.78□□□□□ -0.68
SRGAP3-211ENST00000518265 DPYSL4O14531 572 aa10.77□□□□□ -0.68
SRGAP3-211ENST00000518265 FYB1O15117 783 aa10.77□□□□□ -0.68
SRGAP3-211ENST00000518265 PARP9Q8IXQ6 854 aa10.77□□□□□ -0.68
SRGAP3-211ENST00000518265 YTHDC1Q96MU7 727 aaKnown RBP10.77□□□□□ -0.68
SRGAP3-211ENST00000518265 USP6P35125 1406 aa10.77□□□□□ -0.69
SRGAP3-211ENST00000518265 CCDC102AQ96A19 550 aa10.77□□□□□ -0.69
SRGAP3-211ENST00000518265 PARD3Q8TEW0 1356 aa10.76□□□□□ -0.69
SRGAP3-211ENST00000518265 LTN1O94822 1766 aa10.76□□□□□ -0.69
SRGAP3-211ENST00000518265 TTC21BQ7Z4L5 1316 aa10.76□□□□□ -0.69
SRGAP3-211ENST00000518265 DDRGK1Q96HY6 314 aa10.76□□□□□ -0.69
SRGAP3-211ENST00000518265 EDC4Q6P2E9 1401 aaKnown RBP10.76□□□□□ -0.69
SRGAP3-211ENST00000518265 RGPD5Q99666 1765 aa10.76□□□□□ -0.69
SRGAP3-211ENST00000518265 POLR3AO14802 1390 aaPredicted RBP10.76□□□□□ -0.69
SRGAP3-211ENST00000518265 CGNL1Q0VF96 1302 aa10.76□□□□□ -0.69
SRGAP3-211ENST00000518265 TRAK2O60296 914 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms